RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 NMES1Q9C002 83 aa15.29■□□□□ 0.04
USP39-201ENST00000323701 HMSDA8MTL9 139 aa15.29■□□□□ 0.04
USP39-201ENST00000323701 LUMP51884 338 aaPredicted RBP15.29■□□□□ 0.04
USP39-201ENST00000323701 CLLU1Q5K131 121 aa15.29■□□□□ 0.04
USP39-201ENST00000323701 C11orf87Q6NUJ2 197 aa15.29■□□□□ 0.04
USP39-201ENST00000323701 VRK1Q99986 396 aaPredicted RBP15.29■□□□□ 0.04
USP39-201ENST00000323701 RNF126Q9BV68 326 aa15.29■□□□□ 0.04
USP39-201ENST00000323701 SUCNR1Q9BXA5 334 aa15.29■□□□□ 0.04
USP39-201ENST00000323701 TMEM222Q9H0R3 208 aa15.29■□□□□ 0.04
USP39-201ENST00000323701 OR2S2Q9NQN1 319 aa15.29■□□□□ 0.04
USP39-201ENST00000323701 GSKIPQ9P0R6 139 aa15.29■□□□□ 0.04
USP39-201ENST00000323701 USF3Q68DE3 2245 aa15.29■□□□□ 0.04
USP39-201ENST00000323701 LRRC30A6NM36 301 aa15.28■□□□□ 0.04
USP39-201ENST00000323701 TMPRSS2O15393 492 aa15.28■□□□□ 0.04
USP39-201ENST00000323701 LRTM2Q8N967 370 aa15.28■□□□□ 0.04
USP39-201ENST00000323701 MBD2Q9UBB5 411 aa15.28■□□□□ 0.04
USP39-201ENST00000323701 TANC2Q9HCD6 1990 aa15.28■□□□□ 0.04
USP39-201ENST00000323701 IGHV3-7P01780 117 aa15.28■□□□□ 0.04
USP39-201ENST00000323701 CR1LQ2VPA4 569 aa15.28■□□□□ 0.04
USP39-201ENST00000323701 LYPD2Q6UXB3 125 aa15.28■□□□□ 0.04
USP39-201ENST00000323701 ZNF546Q86UE3 836 aa15.28■□□□□ 0.04
USP39-201ENST00000323701 FAM185AQ8N0U4 392 aa15.28■□□□□ 0.04
USP39-201ENST00000323701 SLC35G3Q8N808 338 aa15.28■□□□□ 0.04
USP39-201ENST00000323701 OR51H1Q8NH63 302 aa15.28■□□□□ 0.04
USP39-201ENST00000323701 LRRC20Q8TCA0 184 aa15.28■□□□□ 0.04
USP39-201ENST00000323701 C2orf50Q96LR7 162 aa15.28■□□□□ 0.04
USP39-201ENST00000323701 ZNF665Q9H7R5 613 aa15.28■□□□□ 0.04
USP39-201ENST00000323701 AKAP6Q13023 2319 aa15.28■□□□□ 0.04
USP39-201ENST00000323701 DOPEY1Q5JWR5 2465 aa15.27■□□□□ 0.04
USP39-201ENST00000323701 LGALS8O00214 317 aa15.27■□□□□ 0.04
USP39-201ENST00000323701 SIGLEC5O15389 551 aa15.27■□□□□ 0.04
USP39-201ENST00000323701 CGB3P0DN86 165 aa15.27■□□□□ 0.04
USP39-201ENST00000323701 CGB7P0DN87 165 aa15.27■□□□□ 0.04
USP39-201ENST00000323701 PSMB6P28072 239 aa15.27■□□□□ 0.04
USP39-201ENST00000323701 IAH1Q2TAA2 248 aaPredicted RBP15.27■□□□□ 0.04
USP39-201ENST00000323701 TMEM268Q5VZI3 342 aa15.27■□□□□ 0.04
USP39-201ENST00000323701 CMTM1Q8IZ96 169 aa15.27■□□□□ 0.04
USP39-201ENST00000323701 ZNF808Q8N4W9 903 aaPredicted RBP15.27■□□□□ 0.04
USP39-201ENST00000323701 DRAM1Q8N682 238 aa15.27■□□□□ 0.04
USP39-201ENST00000323701 PPP1R35Q8TAP8 253 aa15.27■□□□□ 0.04
USP39-201ENST00000323701 KCNS2Q9ULS6 477 aa15.27■□□□□ 0.04
USP39-201ENST00000323701 RBM7Q9Y580 266 aaKnown RBP15.27■□□□□ 0.04
USP39-201ENST00000323701 CRYBG3Q68DQ2 2970 aa15.27■□□□□ 0.03
USP39-201ENST00000323701 PPIAL4EA0A075B759 164 aa15.26■□□□□ 0.03
USP39-201ENST00000323701 PPIAL4DF5H284 164 aa15.26■□□□□ 0.03
USP39-201ENST00000323701 L7N2F9 121 aa15.26■□□□□ 0.03
USP39-201ENST00000323701 TNFRSF13BO14836 293 aaPredicted RBP15.26■□□□□ 0.03
USP39-201ENST00000323701 LY6HO94772 140 aa15.26■□□□□ 0.03
USP39-201ENST00000323701 SOD3P08294 240 aa15.26■□□□□ 0.03
USP39-201ENST00000323701 PPIAL4FP0DN26 164 aa15.26■□□□□ 0.03
USP39-201ENST00000323701 COL8A2P25067 703 aa15.26■□□□□ 0.03
USP39-201ENST00000323701 TAGLNQ01995 201 aaKnown RBP15.26■□□□□ 0.03
USP39-201ENST00000323701 RAB32Q13637 225 aa15.26■□□□□ 0.03
USP39-201ENST00000323701 C17orf58Q2M2W7 97 aa15.26■□□□□ 0.03
USP39-201ENST00000323701 COMMD7Q86VX2 200 aa15.26■□□□□ 0.03
USP39-201ENST00000323701 OR5AC2Q9NZP5 309 aa15.26■□□□□ 0.03
USP39-201ENST00000323701 COMMD9Q9P000 198 aa15.26■□□□□ 0.03
USP39-201ENST00000323701 UBE2J1Q9Y385 318 aaPredicted RBP15.26■□□□□ 0.03
USP39-201ENST00000323701 PPIAL4AQ9Y536 164 aa15.26■□□□□ 0.03
USP39-201ENST00000323701 IGHV1-69-2A0A0G2JMI3 117 aa15.26■□□□□ 0.03
USP39-201ENST00000323701 RNF222A6NCQ9 220 aa15.26■□□□□ 0.03
USP39-201ENST00000323701 F2RP25116 425 aa15.26■□□□□ 0.03
USP39-201ENST00000323701 OR2D2Q9H210 308 aa15.26■□□□□ 0.03
USP39-201ENST00000323701 TNFSF18Q9UNG2 199 aa15.26■□□□□ 0.03
USP39-201ENST00000323701 SLC25A4P12235 298 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 GZMHP20718 246 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 LOXL3P58215 753 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 LINC00205P59089 165 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 ERVFRD-1P60508 538 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 FGL1Q08830 312 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 TMUB2Q71RG4 321 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 SELENOHQ8IZQ5 122 aaKnown RBP15.25■□□□□ 0.03
USP39-201ENST00000323701 LGI3Q8N145 548 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 OR5D13Q8NGL4 314 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 C14orf79Q96F83 325 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 RRNAD1Q96FB5 475 aaKnown RBP15.25■□□□□ 0.03
USP39-201ENST00000323701 TMEM56Q96MV1 263 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 AGMATQ9BSE5 352 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 MFFQ9GZY8 342 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 TOLLIPQ9H0E2 274 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 TMEM56-RWDD3S4R434 201 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 TRAV38-1A0A0B4J264 116 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 SPINT2O43291 252 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 CDS2O95674 445 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 RNF224P0DH78 156 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 UCP1P25874 307 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 TMEM65Q6PI78 240 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 FOXRED2Q8IWF2 684 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 OR52M1Q8NGK5 317 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 LEAP2Q969E1 77 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 ABHD14BQ96IU4 210 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 CTSZQ9UBR2 303 aa15.25■□□□□ 0.03
USP39-201ENST00000323701 ST8SIA5O15466 376 aa15.24■□□□□ 0.03
USP39-201ENST00000323701 RPA2P15927 270 aa15.24■□□□□ 0.03
USP39-201ENST00000323701 AGAP20933 346 aa15.24■□□□□ 0.03
USP39-201ENST00000323701 ZNF134P52741 427 aa15.24■□□□□ 0.03
USP39-201ENST00000323701 C1orf87Q8N0U7 546 aa15.24■□□□□ 0.03
USP39-201ENST00000323701 GSX2Q9BZM3 304 aa15.24■□□□□ 0.03
USP39-201ENST00000323701 ARL6Q9H0F7 186 aa15.24■□□□□ 0.03
USP39-201ENST00000323701 CALYQ9NYX4 217 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms