RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 TDGF1P3P51864 188 aa12.51□□□□□ -0.41
COL6A2-202ENST00000310645 YRDCQ86U90 279 aaKnown RBP12.51□□□□□ -0.41
COL6A2-202ENST00000310645 TBX15Q96SF7 602 aa12.51□□□□□ -0.41
COL6A2-202ENST00000310645 WNT5BQ9H1J7 359 aa12.51□□□□□ -0.41
COL6A2-202ENST00000310645 WDR1O75083 606 aa12.5□□□□□ -0.41
COL6A2-202ENST00000310645 NAPSAO96009 420 aa12.5□□□□□ -0.41
COL6A2-202ENST00000310645 CRYAAP02489 173 aa12.5□□□□□ -0.41
COL6A2-202ENST00000310645 SLC23A3Q6PIS1 610 aa12.5□□□□□ -0.41
COL6A2-202ENST00000310645 FOXB1Q99853 325 aa12.5□□□□□ -0.41
COL6A2-202ENST00000310645 PSMG3Q9BT73 122 aaPredicted RBP12.5□□□□□ -0.41
COL6A2-202ENST00000310645 OR2H1Q9GZK4 316 aa12.5□□□□□ -0.41
COL6A2-202ENST00000310645 OR1A1Q9P1Q5 309 aa12.5□□□□□ -0.41
COL6A2-202ENST00000310645 TRAPPC1Q9Y5R8 145 aa12.5□□□□□ -0.41
COL6A2-202ENST00000310645 C10orf142B7Z368 130 aa12.5□□□□□ -0.41
COL6A2-202ENST00000310645 IGKV1-39P01597 117 aa12.5□□□□□ -0.41
COL6A2-202ENST00000310645 IGKV1D-39P04432 117 aa12.5□□□□□ -0.41
COL6A2-202ENST00000310645 ACOT6Q3I5F7 207 aaPredicted RBP12.5□□□□□ -0.41
COL6A2-202ENST00000310645 CLDN23Q96B33 292 aa12.5□□□□□ -0.41
COL6A2-202ENST00000310645 PINX1Q96BK5 328 aaKnown RBP12.5□□□□□ -0.41
COL6A2-202ENST00000310645 HIPK2Q9H2X6 1198 aa12.5□□□□□ -0.41
COL6A2-202ENST00000310645 NAGKQ9UJ70 344 aa12.5□□□□□ -0.41
COL6A2-202ENST00000310645 ATP23Q9Y6H3 246 aa12.5□□□□□ -0.41
COL6A2-202ENST00000310645 CELSR3Q9NYQ7 3312 aa12.5□□□□□ -0.41
COL6A2-202ENST00000310645 TRAPPC2LH3BP13 241 aa12.5□□□□□ -0.41
COL6A2-202ENST00000310645 CCKARP32238 428 aa12.5□□□□□ -0.41
COL6A2-202ENST00000310645 UBE2G2P60604 165 aa12.5□□□□□ -0.41
COL6A2-202ENST00000310645 ACTL10Q5JWF8 245 aa12.5□□□□□ -0.41
COL6A2-202ENST00000310645 ACSM6Q6P461 480 aa12.5□□□□□ -0.41
COL6A2-202ENST00000310645 GBGT1Q8N5D6 347 aa12.5□□□□□ -0.41
COL6A2-202ENST00000310645 OR2W1Q9Y3N9 320 aa12.5□□□□□ -0.41
COL6A2-202ENST00000310645 GRIFINA4D1Z8 144 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 ZIC3O60481 467 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 IGLV3-19P01714 112 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 NPSP0C0P6 89 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 TMEM208Q9BTX3 173 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 MTCH1Q9NZJ7 389 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 GOLT1BQ9Y3E0 138 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 OR6C6A6NF89 314 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 SYNGR1O43759 233 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 GDF9O60383 454 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 GLB1P16278 677 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 HNF1AP20823 631 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 CLDN15P56746 228 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 PRDX4Q13162 271 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 IGFBP7Q16270 282 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 PCSK4Q6UW60 755 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 TOMM20LQ6UXN7 152 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 TCF23Q7RTU1 214 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 OR10G9Q8NGN4 311 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 OR10G7Q8NGN6 311 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 PSMF1Q92530 271 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 SEMA5BQ9P283 1151 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 USF3Q68DE3 2245 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 PGPEP1LA6NFU8 196 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 IGKV1-5P01602 117 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 GCH1P30793 250 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 MKXQ8IYA7 352 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 SLC25A45Q8N413 288 aa12.49□□□□□ -0.41
COL6A2-202ENST00000310645 IGLV3-12A0A075B6K2 115 aa12.48□□□□□ -0.41
COL6A2-202ENST00000310645 A0A096LPE4 126 aa12.48□□□□□ -0.41
COL6A2-202ENST00000310645 A0A1W2PPZ6 126 aa12.48□□□□□ -0.41
COL6A2-202ENST00000310645 CXCL13O43927 109 aa12.48□□□□□ -0.41
COL6A2-202ENST00000310645 FKBP2P26885 142 aaKnown RBP12.48□□□□□ -0.41
COL6A2-202ENST00000310645 IL3RAP26951 378 aa12.48□□□□□ -0.41
COL6A2-202ENST00000310645 TDRG1Q3Y452 100 aa12.48□□□□□ -0.41
COL6A2-202ENST00000310645 C1orf194Q5T5A4 169 aa12.48□□□□□ -0.41
COL6A2-202ENST00000310645 KCNIP4Q6PIL6 250 aa12.48□□□□□ -0.41
COL6A2-202ENST00000310645 RABEPKQ7Z6M1 372 aa12.48□□□□□ -0.41
COL6A2-202ENST00000310645 OR51B6Q9H340 312 aa12.48□□□□□ -0.41
COL6A2-202ENST00000310645 R4GN57 208 aa12.48□□□□□ -0.41
COL6A2-202ENST00000310645 FRYLO94915 3013 aa12.48□□□□□ -0.41
COL6A2-202ENST00000310645 HPRT1P00492 218 aa12.47□□□□□ -0.41
COL6A2-202ENST00000310645 CTXN2P0C2S0 81 aa12.47□□□□□ -0.41
COL6A2-202ENST00000310645 OR3A1P47881 315 aa12.47□□□□□ -0.41
COL6A2-202ENST00000310645 PDLIM4P50479 330 aa12.47□□□□□ -0.41
COL6A2-202ENST00000310645 FGF12P61328 243 aa12.47□□□□□ -0.41
COL6A2-202ENST00000310645 FFAR4Q5NUL3 377 aa12.47□□□□□ -0.41
COL6A2-202ENST00000310645 CPEB3Q8NE35 698 aaKnown RBP12.47□□□□□ -0.41
COL6A2-202ENST00000310645 FGF23Q9GZV9 251 aaPredicted RBP12.47□□□□□ -0.41
COL6A2-202ENST00000310645 PATZ1Q9HBE1 687 aaKnown RBP12.47□□□□□ -0.41
COL6A2-202ENST00000310645 RARRES3Q9UL19 164 aa12.47□□□□□ -0.41
COL6A2-202ENST00000310645 LILRA1O75019 489 aa12.47□□□□□ -0.41
COL6A2-202ENST00000310645 HOXA6P31267 233 aa12.47□□□□□ -0.41
COL6A2-202ENST00000310645 CARD18P57730 90 aa12.47□□□□□ -0.41
COL6A2-202ENST00000310645 SPINK9Q5DT21 86 aa12.47□□□□□ -0.41
COL6A2-202ENST00000310645 CISD2Q8N5K1 135 aaKnown RBP12.47□□□□□ -0.41
COL6A2-202ENST00000310645 PARD6AQ9NPB6 346 aa12.47□□□□□ -0.41
COL6A2-202ENST00000310645 PAM16Q9Y3D7 125 aa12.47□□□□□ -0.41
COL6A2-202ENST00000310645 IGHV3-64DA0A0J9YX35 117 aa12.47□□□□□ -0.41
COL6A2-202ENST00000310645 LIFP15018 202 aa12.47□□□□□ -0.41
COL6A2-202ENST00000310645 NXPH1P58417 271 aa12.47□□□□□ -0.41
COL6A2-202ENST00000310645 ANAPC16Q96DE5 110 aa12.47□□□□□ -0.41
COL6A2-202ENST00000310645 AGMATQ9BSE5 352 aa12.47□□□□□ -0.41
COL6A2-202ENST00000310645 IRF2P14316 349 aa12.46□□□□□ -0.41
COL6A2-202ENST00000310645 RAB4AP20338 218 aa12.46□□□□□ -0.41
COL6A2-202ENST00000310645 MPLP40238 635 aa12.46□□□□□ -0.41
COL6A2-202ENST00000310645 ZNF324BQ6AW86 544 aaPredicted RBP12.46□□□□□ -0.41
COL6A2-202ENST00000310645 ZNF784Q8NCA9 323 aaPredicted RBP12.46□□□□□ -0.41
COL6A2-202ENST00000310645 HLA-CQ95604 372 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms