RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 JPT1Q9UK76 154 aa18.92■□□□□ 0.62
PTX3-201ENST00000295927 HMSDA8MTL9 139 aa18.92■□□□□ 0.62
PTX3-201ENST00000295927 OMGP23515 440 aa18.92■□□□□ 0.62
PTX3-201ENST00000295927 SRPXP78539 464 aa18.92■□□□□ 0.62
PTX3-201ENST00000295927 ZNF645Q8N7E2 425 aa18.92■□□□□ 0.62
PTX3-201ENST00000295927 OR2D2Q9H210 308 aa18.92■□□□□ 0.62
PTX3-201ENST00000295927 GNG12Q9UBI6 72 aa18.92■□□□□ 0.62
PTX3-201ENST00000295927 KAAG1Q9UBP8 84 aa18.92■□□□□ 0.62
PTX3-201ENST00000295927 CTSZQ9UBR2 303 aa18.92■□□□□ 0.62
PTX3-201ENST00000295927 RALYQ9UKM9 306 aaKnown RBP18.92■□□□□ 0.62
PTX3-201ENST00000295927 KBTBD11-OT1A0A1B0GTJ5 212 aa18.91■□□□□ 0.62
PTX3-201ENST00000295927 A6NNC1 897 aa18.91■□□□□ 0.62
PTX3-201ENST00000295927 H0Y980 276 aa18.91■□□□□ 0.62
PTX3-201ENST00000295927 CXCL2P19875 107 aa18.91■□□□□ 0.62
PTX3-201ENST00000295927 UCP1P25874 307 aa18.91■□□□□ 0.62
PTX3-201ENST00000295927 LOXL3P58215 753 aa18.91■□□□□ 0.62
PTX3-201ENST00000295927 TMEM268Q5VZI3 342 aa18.91■□□□□ 0.62
PTX3-201ENST00000295927 C11orf87Q6NUJ2 197 aa18.91■□□□□ 0.62
PTX3-201ENST00000295927 OR51H1Q8NH63 302 aa18.91■□□□□ 0.62
PTX3-201ENST00000295927 CORO2AQ92828 525 aa18.91■□□□□ 0.62
PTX3-201ENST00000295927 TMEM56Q96MV1 263 aa18.91■□□□□ 0.62
PTX3-201ENST00000295927 CLN8Q9UBY8 286 aa18.91■□□□□ 0.62
PTX3-201ENST00000295927 LAMP3Q9UQV4 416 aa18.91■□□□□ 0.62
PTX3-201ENST00000295927 TMEM56-RWDD3S4R434 201 aa18.91■□□□□ 0.62
PTX3-201ENST00000295927 ARPC5O15511 151 aa18.9■□□□□ 0.62
PTX3-201ENST00000295927 NDUFB3O43676 98 aa18.9■□□□□ 0.62
PTX3-201ENST00000295927 NDUFA2O43678 99 aa18.9■□□□□ 0.62
PTX3-201ENST00000295927 RP2O75695 350 aa18.9■□□□□ 0.62
PTX3-201ENST00000295927 RNF224P0DH78 156 aa18.9■□□□□ 0.62
PTX3-201ENST00000295927 PSMB6P28072 239 aa18.9■□□□□ 0.62
PTX3-201ENST00000295927 SSTR2P30874 369 aa18.9■□□□□ 0.62
PTX3-201ENST00000295927 IAH1Q2TAA2 248 aaPredicted RBP18.9■□□□□ 0.62
PTX3-201ENST00000295927 MORN2Q502X0 79 aa18.9■□□□□ 0.62
PTX3-201ENST00000295927 UBTD1Q9HAC8 227 aa18.9■□□□□ 0.62
PTX3-201ENST00000295927 RAB9BQ9NP90 201 aa18.9■□□□□ 0.62
PTX3-201ENST00000295927 GSKIPQ9P0R6 139 aa18.9■□□□□ 0.62
PTX3-201ENST00000295927 hADV38S2A0JD32 116 aa18.9■□□□□ 0.62
PTX3-201ENST00000295927 MPC2O95563 127 aa18.9■□□□□ 0.62
PTX3-201ENST00000295927 WNT2P09544 360 aa18.9■□□□□ 0.62
PTX3-201ENST00000295927 LRRC10Q5BKY1 277 aa18.9■□□□□ 0.62
PTX3-201ENST00000295927 SLC35G3Q8N808 338 aa18.9■□□□□ 0.62
PTX3-201ENST00000295927 ZNF729A6NN14 1252 aaPredicted RBP18.89■□□□□ 0.61
PTX3-201ENST00000295927 YPEL1O60688 119 aa18.89■□□□□ 0.61
PTX3-201ENST00000295927 LY6HO94772 140 aa18.89■□□□□ 0.61
PTX3-201ENST00000295927 CDS2O95674 445 aa18.89■□□□□ 0.61
PTX3-201ENST00000295927 SLC25A4P12235 298 aa18.89■□□□□ 0.61
PTX3-201ENST00000295927 IL15RAQ13261 267 aa18.89■□□□□ 0.61
PTX3-201ENST00000295927 ZNF695Q8IW36 515 aa18.89■□□□□ 0.61
PTX3-201ENST00000295927 SELENOHQ8IZQ5 122 aaKnown RBP18.89■□□□□ 0.61
PTX3-201ENST00000295927 NEU4Q8WWR8 484 aaPredicted RBP18.89■□□□□ 0.61
PTX3-201ENST00000295927 YPEL2Q96QA6 119 aa18.89■□□□□ 0.61
PTX3-201ENST00000295927 C19orf12Q9NSK7 152 aa18.89■□□□□ 0.61
PTX3-201ENST00000295927 PSG11Q9UQ72 335 aa18.89■□□□□ 0.61
PTX3-201ENST00000295927 LINC00312Q9Y6C7 94 aa18.89■□□□□ 0.61
PTX3-201ENST00000295927 DVL1O14640 695 aa18.88■□□□□ 0.61
PTX3-201ENST00000295927 MEF2CQ06413 473 aaPredicted RBP18.88■□□□□ 0.61
PTX3-201ENST00000295927 ZBTB34Q8NCN2 500 aa18.88■□□□□ 0.61
PTX3-201ENST00000295927 EDARADDQ8WWZ3 215 aa18.88■□□□□ 0.61
PTX3-201ENST00000295927 C5orf30Q96GV9 206 aa18.88■□□□□ 0.61
PTX3-201ENST00000295927 AGMATQ9BSE5 352 aa18.88■□□□□ 0.61
PTX3-201ENST00000295927 YLPM1P49750 1951 aaKnown RBP18.88■□□□□ 0.61
PTX3-201ENST00000295927 L7N2F9 121 aa18.88■□□□□ 0.61
PTX3-201ENST00000295927 ST8SIA5O15466 376 aa18.88■□□□□ 0.61
PTX3-201ENST00000295927 B3GALNT1O75752 331 aa18.88■□□□□ 0.61
PTX3-201ENST00000295927 FSTL3O95633 263 aa18.88■□□□□ 0.61
PTX3-201ENST00000295927 IGHV2-70P01814 119 aa18.88■□□□□ 0.61
PTX3-201ENST00000295927 RPL31P62899 125 aaKnown RBP18.88■□□□□ 0.61
PTX3-201ENST00000295927 ZNF546Q86UE3 836 aa18.88■□□□□ 0.61
PTX3-201ENST00000295927 THAP6Q8TBB0 222 aa18.88■□□□□ 0.61
PTX3-201ENST00000295927 ABHD14BQ96IU4 210 aa18.88■□□□□ 0.61
PTX3-201ENST00000295927 GON7Q9BXV9 100 aa18.88■□□□□ 0.61
PTX3-201ENST00000295927 SLA2Q9H6Q3 261 aa18.88■□□□□ 0.61
PTX3-201ENST00000295927 LINC00574Q9H8X3 128 aa18.88■□□□□ 0.61
PTX3-201ENST00000295927 TMED3Q9Y3Q3 217 aa18.88■□□□□ 0.61
PTX3-201ENST00000295927 TSC22D2O75157 780 aa18.87■□□□□ 0.61
PTX3-201ENST00000295927 SNAPC5O75971 98 aa18.87■□□□□ 0.61
PTX3-201ENST00000295927 TMEM65Q6PI78 240 aa18.87■□□□□ 0.61
PTX3-201ENST00000295927 GFOD1Q9NXC2 390 aa18.87■□□□□ 0.61
PTX3-201ENST00000295927 FLNCQ14315 2725 aa18.87■□□□□ 0.61
PTX3-201ENST00000295927 ZNF273Q14593 569 aa18.86■□□□□ 0.61
PTX3-201ENST00000295927 MSMO1Q15800 293 aa18.86■□□□□ 0.61
PTX3-201ENST00000295927 H1FXQ92522 213 aaKnown RBP18.86■□□□□ 0.61
PTX3-201ENST00000295927 TAS2R3Q9NYW6 316 aa18.86■□□□□ 0.61
PTX3-201ENST00000295927 IDI2-AS1Q9NZ38 188 aa18.86■□□□□ 0.61
PTX3-201ENST00000295927 MBD2Q9UBB5 411 aa18.86■□□□□ 0.61
PTX3-201ENST00000295927 ZNF462Q96JM2 2506 aa18.86■□□□□ 0.61
PTX3-201ENST00000295927 IGHV3-7P01780 117 aa18.86■□□□□ 0.61
PTX3-201ENST00000295927 DAOP14920 347 aa18.86■□□□□ 0.61
PTX3-201ENST00000295927 ZNF16P17020 682 aaPredicted RBP18.86■□□□□ 0.61
PTX3-201ENST00000295927 MRPS11P82912 194 aaKnown RBP18.86■□□□□ 0.61
PTX3-201ENST00000295927 EIF4EBP1Q13541 118 aaPredicted RBP18.86■□□□□ 0.61
PTX3-201ENST00000295927 RAB32Q13637 225 aa18.86■□□□□ 0.61
PTX3-201ENST00000295927 UTF1Q5T230 341 aa18.86■□□□□ 0.61
PTX3-201ENST00000295927 AVPI1Q5T686 147 aa18.86■□□□□ 0.61
PTX3-201ENST00000295927 FAM219AQ8IW50 185 aa18.86■□□□□ 0.61
PTX3-201ENST00000295927 RBPMSQ93062 196 aaKnown RBP18.86■□□□□ 0.61
PTX3-201ENST00000295927 RNF126Q9BV68 326 aa18.86■□□□□ 0.61
PTX3-201ENST00000295927 LIN7CQ9NUP9 197 aaKnown RBP18.86■□□□□ 0.61
PTX3-201ENST00000295927 DCHS2Q6V1P9 2916 aa18.85■□□□□ 0.61
PTX3-201ENST00000295927 DOPEY1Q5JWR5 2465 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms