RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 PPP1R35Q8TAP8 253 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 MS4A7Q9GZW8 240 aaPredicted RBP10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 OR2D2Q9H210 308 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 ELOVL5Q9NYP7 299 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 PLA2G2EQ9NZK7 142 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 Q9UFV3 132 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 SPINT2O43291 252 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 SPRY3O43610 288 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 CD40P25942 277 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 RAB5CP51148 216 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 DEFA5Q01523 94 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 BTN1A1Q13410 526 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 MSMO1Q15800 293 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 ZNF585BQ52M93 769 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 BTNL8Q6UX41 500 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 MOGAT3Q86VF5 341 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 HSD17B11Q8NBQ5 300 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 OR13A1Q8NGR1 328 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 ITLN1Q8WWA0 313 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 LRRC46Q96FV0 321 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 RAB40CQ96S21 281 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 TREM1Q9NP99 234 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 CACNG5Q9UF02 275 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 RNF150Q9ULK6 438 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 RNF115Q9Y4L5 304 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 IGKV1D-17A0A075B6S4 117 aa10.82□□□□□ -0.68
SPTLC1-201ENST00000262554 K7ENP7 123 aa10.82□□□□□ -0.68
SPTLC1-201ENST00000262554 ABCD4O14678 606 aa10.82□□□□□ -0.68
SPTLC1-201ENST00000262554 ZNF737O75373 536 aa10.82□□□□□ -0.68
SPTLC1-201ENST00000262554 IGKV1-5P01602 117 aa10.82□□□□□ -0.68
SPTLC1-201ENST00000262554 DANCRP0C864 163 aa10.82□□□□□ -0.68
SPTLC1-201ENST00000262554 OMGP23515 440 aa10.82□□□□□ -0.68
SPTLC1-201ENST00000262554 SSTR5P35346 364 aa10.82□□□□□ -0.68
SPTLC1-201ENST00000262554 PPP1CCP36873 323 aaKnown RBP10.82□□□□□ -0.68
SPTLC1-201ENST00000262554 ASCL1P50553 236 aa10.82□□□□□ -0.68
SPTLC1-201ENST00000262554 RPL23AP62750 156 aaKnown RBP10.82□□□□□ -0.68
SPTLC1-201ENST00000262554 CATR1Q13166 79 aa10.82□□□□□ -0.68
SPTLC1-201ENST00000262554 EDDM3AQ14507 147 aa10.82□□□□□ -0.68
SPTLC1-201ENST00000262554 CLINT1Q14677 625 aa10.82□□□□□ -0.68
SPTLC1-201ENST00000262554 GCSAMQ8N6F7 178 aa10.82□□□□□ -0.68
SPTLC1-201ENST00000262554 TPRX1Q8N7U7 411 aa10.82□□□□□ -0.68
SPTLC1-201ENST00000262554 SNX22Q96L94 193 aa10.82□□□□□ -0.68
SPTLC1-201ENST00000262554 C16orf97H3BN30 126 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 MGST3O14880 152 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 TMEM50AO95807 157 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 ADH4P08319 380 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 HTD2P86397 168 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 SPAG16Q8N0X2 631 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 MRPL37Q9BZE1 423 aaKnown RBP10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 STRAPQ9Y3F4 350 aaKnown RBP10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 CUL9Q8IWT3 2517 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 IGHV3OR15-7A0A075B7D8 119 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 CST7O76096 145 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 ATG12O94817 140 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 LHBP01229 141 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 PRH1P02810 166 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 GZMHP20718 246 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 CCKARP32238 428 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 GATA4P43694 442 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 CAMLGP49069 296 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 DYNLT3P51808 116 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 PAX9P55771 341 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 SRSF3P84103 164 aaKnown RBP10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 IZUMO4Q1ZYL8 232 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 TMEM108Q6UXF1 575 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 Q6ZRM9 215 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 C22orf34Q6ZV56 151 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 STX12Q86Y82 276 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 ZNF808Q8N4W9 903 aaPredicted RBP10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 NUP37Q8NFH4 326 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 OR5C1Q8NGR4 320 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 LYPD6BQ8NI32 183 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 SH3BGRL3Q9H299 93 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 CACFD1Q9UGQ2 172 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 ZNF835Q9Y2P0 537 aa10.81□□□□□ -0.68
SPTLC1-201ENST00000262554 DSPP15924 2871 aaKnown RBP10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 ODAMA1E959 279 aa10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 KIAA1324LA8MWY0 1029 aaPredicted RBP10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 F8W036 122 aa10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 C15orf65H3BRN8 121 aa10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 SIGLEC5O15389 551 aa10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 SYNGR2O43760 224 aa10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 TSPAN15O95858 294 aa10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 TNFSF4P23510 183 aa10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 TNFAIP6P98066 277 aaPredicted RBP10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 ZNF616Q08AN1 781 aa10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 EIF4EBP1Q13541 118 aaPredicted RBP10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 SPRNQ5BIV9 151 aa10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 COMMD1Q8N668 190 aa10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 TCTEX1D1Q8N7M0 179 aa10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 RFESDQ8TAC1 157 aa10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 TSNAXQ99598 290 aaKnown RBP10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 TMEM231Q9H6L2 316 aa10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 ESRP2Q9H6T0 727 aaKnown RBP10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 UQCC1Q9NVA1 299 aa10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 IL19Q9UHD0 177 aa10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 SH3BGRL2Q9UJC5 107 aa10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 MMP24Q9Y5R2 645 aa10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 WSB1Q9Y6I7 421 aa10.8□□□□□ -0.68
SPTLC1-201ENST00000262554 IGHV3-43A0A0B4J1X8 118 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms