RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 ABHD1Q96SE0 405 aa15.2■□□□□ 0.02
PNKP-224ENST00000631020 MEIOCA2RUB1 952 aa15.19■□□□□ 0.02
PNKP-224ENST00000631020 POM121CA8CG34 1229 aa15.19■□□□□ 0.02
PNKP-224ENST00000631020 RNASEK-C17orf49H0YIS7 233 aa15.19■□□□□ 0.02
PNKP-224ENST00000631020 HBZP02008 142 aa15.19■□□□□ 0.02
PNKP-224ENST00000631020 GNG2P59768 71 aa15.19■□□□□ 0.02
PNKP-224ENST00000631020 BPIFB3P59826 476 aa15.19■□□□□ 0.02
PNKP-224ENST00000631020 MRPS15P82914 257 aaKnown RBP15.19■□□□□ 0.02
PNKP-224ENST00000631020 PITPNAQ00169 270 aa15.19■□□□□ 0.02
PNKP-224ENST00000631020 KLRD1Q13241 179 aa15.19■□□□□ 0.02
PNKP-224ENST00000631020 HMGN3Q15651 99 aa15.19■□□□□ 0.02
PNKP-224ENST00000631020 C6orf183Q5T699 404 aa15.19■□□□□ 0.02
PNKP-224ENST00000631020 FAM53AQ6NSI3 398 aaPredicted RBP15.19■□□□□ 0.02
PNKP-224ENST00000631020 SIGLECL1Q8N7X8 197 aa15.19■□□□□ 0.02
PNKP-224ENST00000631020 KIRREL1Q96J84 757 aa15.19■□□□□ 0.02
PNKP-224ENST00000631020 ADAM30Q9UKF2 790 aa15.19■□□□□ 0.02
PNKP-224ENST00000631020 IGHV3OR16-10A0A075B7F0 116 aa15.18■□□□□ 0.02
PNKP-224ENST00000631020 IGKV1D-8A0A087WSZ0 117 aa15.18■□□□□ 0.02
PNKP-224ENST00000631020 CENPVL3A0A0U1RRI6 287 aa15.18■□□□□ 0.02
PNKP-224ENST00000631020 hCG_1809904A0A1W2PP81 198 aa15.18■□□□□ 0.02
PNKP-224ENST00000631020 A0A1W2PPE2 198 aa15.18■□□□□ 0.02
PNKP-224ENST00000631020 A0A1W2PR64 198 aa15.18■□□□□ 0.02
PNKP-224ENST00000631020 A0A1W2PRV1 198 aa15.18■□□□□ 0.02
PNKP-224ENST00000631020 CLDN34H7C241 214 aa15.18■□□□□ 0.02
PNKP-224ENST00000631020 IGHV4-38-2P0DP08 117 aa15.18■□□□□ 0.02
PNKP-224ENST00000631020 TALDO1P37837 337 aa15.18■□□□□ 0.02
PNKP-224ENST00000631020 LTC4SQ16873 150 aa15.18■□□□□ 0.02
PNKP-224ENST00000631020 MOB1BQ7L9L4 216 aa15.18■□□□□ 0.02
PNKP-224ENST00000631020 SNX29P2Q8IUI4 249 aa15.18■□□□□ 0.02
PNKP-224ENST00000631020 PDZD9Q8IXQ8 264 aa15.18■□□□□ 0.02
PNKP-224ENST00000631020 PRR18Q8N4B5 295 aa15.18■□□□□ 0.02
PNKP-224ENST00000631020 LHX4Q969G2 390 aa15.18■□□□□ 0.02
PNKP-224ENST00000631020 SOSTQ9BQB4 213 aa15.18■□□□□ 0.02
PNKP-224ENST00000631020 MS4A7Q9GZW8 240 aaPredicted RBP15.18■□□□□ 0.02
PNKP-224ENST00000631020 IDI2-AS1Q9NZ38 188 aa15.18■□□□□ 0.02
PNKP-224ENST00000631020 KCNIP1Q9NZI2 227 aa15.18■□□□□ 0.02
PNKP-224ENST00000631020 SESN1Q9Y6P5 492 aa15.18■□□□□ 0.02
PNKP-224ENST00000631020 F2RL2O00254 374 aa15.17■□□□□ 0.02
PNKP-224ENST00000631020 SCTP09683 121 aa15.17■□□□□ 0.02
PNKP-224ENST00000631020 DTYMKP23919 212 aa15.17■□□□□ 0.02
PNKP-224ENST00000631020 LOXL3P58215 753 aa15.17■□□□□ 0.02
PNKP-224ENST00000631020 TRAT1Q6PIZ9 186 aa15.17■□□□□ 0.02
PNKP-224ENST00000631020 GVQW1Q8N7I0 195 aa15.17■□□□□ 0.02
PNKP-224ENST00000631020 ZBTB8BQ8NAP8 495 aaPredicted RBP15.17■□□□□ 0.02
PNKP-224ENST00000631020 OCSTAMPQ9BR26 566 aa15.17■□□□□ 0.02
PNKP-224ENST00000631020 ST6GALNAC5Q9BVH7 336 aa15.17■□□□□ 0.02
PNKP-224ENST00000631020 NBEAL1Q6ZS30 2694 aa15.17■□□□□ 0.02
PNKP-224ENST00000631020 TRAV40A0A0B4J280 105 aa15.17■□□□□ 0.02
PNKP-224ENST00000631020 FAM172BPA6NC97 362 aa15.17■□□□□ 0.02
PNKP-224ENST00000631020 MEIS3P1A6NDR6 274 aa15.17■□□□□ 0.02
PNKP-224ENST00000631020 TRDCB7Z8K6 153 aa15.17■□□□□ 0.02
PNKP-224ENST00000631020 SPINT2O43291 252 aa15.17■□□□□ 0.02
PNKP-224ENST00000631020 PRSS3P35030 304 aa15.17■□□□□ 0.02
PNKP-224ENST00000631020 SRSF7Q16629 238 aaKnown RBP eCLIP15.17■□□□□ 0.02
PNKP-224ENST00000631020 CADM3Q8N126 398 aa15.17■□□□□ 0.02
PNKP-224ENST00000631020 PNKDQ8N490 385 aa15.17■□□□□ 0.02
PNKP-224ENST00000631020 TMEM133Q9H2Q1 129 aa15.17■□□□□ 0.02
PNKP-224ENST00000631020 PAIP2BQ9ULR5 123 aaKnown RBP15.17■□□□□ 0.02
PNKP-224ENST00000631020 IGHV3-43A0A0B4J1X8 118 aa15.16■□□□□ 0.02
PNKP-224ENST00000631020 IGKV1-6A0A0C4DH72 117 aa15.16■□□□□ 0.02
PNKP-224ENST00000631020 TPPPO94811 219 aa15.16■□□□□ 0.02
PNKP-224ENST00000631020 GSTT2P0CG29 244 aa15.16■□□□□ 0.02
PNKP-224ENST00000631020 GSTT2BP0CG30 244 aa15.16■□□□□ 0.02
PNKP-224ENST00000631020 IGHV3-43DP0DP04 118 aa15.16■□□□□ 0.02
PNKP-224ENST00000631020 COX7A1P24310 79 aa15.16■□□□□ 0.02
PNKP-224ENST00000631020 NFYBP25208 207 aa15.16■□□□□ 0.02
PNKP-224ENST00000631020 HLA-DRB3P79483 266 aa15.16■□□□□ 0.02
PNKP-224ENST00000631020 Q6ZS49 121 aa15.16■□□□□ 0.02
PNKP-224ENST00000631020 BCL6BQ8N143 479 aaPredicted RBP15.16■□□□□ 0.02
PNKP-224ENST00000631020 OR10A7Q8NGE5 316 aa15.16■□□□□ 0.02
PNKP-224ENST00000631020 GPX8Q8TED1 209 aa15.16■□□□□ 0.02
PNKP-224ENST00000631020 LEAP2Q969E1 77 aa15.16■□□□□ 0.02
PNKP-224ENST00000631020 ZNF48Q96MX3 618 aaPredicted RBP15.16■□□□□ 0.02
PNKP-224ENST00000631020 HEXA-AS1Q9H8Q6 139 aa15.16■□□□□ 0.02
PNKP-224ENST00000631020 A0A087X0M5 115 aa15.15■□□□□ 0.02
PNKP-224ENST00000631020 A0A1B0GX30 115 aa15.15■□□□□ 0.02
PNKP-224ENST00000631020 A0A1W2PRD5 423 aa15.15■□□□□ 0.02
PNKP-224ENST00000631020 A0A1W2PRF3 423 aa15.15■□□□□ 0.02
PNKP-224ENST00000631020 A0A1W2PRM7 423 aa15.15■□□□□ 0.02
PNKP-224ENST00000631020 DNAJC9-AS1A6NH13 148 aa15.15■□□□□ 0.02
PNKP-224ENST00000631020 SDCBPO00560 298 aaPredicted RBP15.15■□□□□ 0.02
PNKP-224ENST00000631020 IGHV3-7P01780 117 aa15.15■□□□□ 0.02
PNKP-224ENST00000631020 FCER2P06734 321 aa15.15■□□□□ 0.02
PNKP-224ENST00000631020 PTBP1P26599 531 aaKnown RBP eCLIP15.15■□□□□ 0.02
PNKP-224ENST00000631020 EIF2B2P49770 351 aaKnown RBP15.15■□□□□ 0.02
PNKP-224ENST00000631020 NCR3LG1Q68D85 454 aa15.15■□□□□ 0.02
PNKP-224ENST00000631020 OR52W1Q6IF63 320 aa15.15■□□□□ 0.02
PNKP-224ENST00000631020 GDPD1Q8N9F7 314 aa15.15■□□□□ 0.02
PNKP-224ENST00000631020 OR52L2PQ8NGH6 319 aa15.15■□□□□ 0.02
PNKP-224ENST00000631020 GALMQ96C23 342 aa15.15■□□□□ 0.02
PNKP-224ENST00000631020 PRDM13Q9H4Q3 707 aa15.15■□□□□ 0.02
PNKP-224ENST00000631020 ZNF286AQ9HBT8 521 aa15.15■□□□□ 0.02
PNKP-224ENST00000631020 MGAT4AQ9UM21 535 aa15.15■□□□□ 0.02
PNKP-224ENST00000631020 SOX21Q9Y651 276 aaPredicted RBP15.15■□□□□ 0.02
PNKP-224ENST00000631020 IGHV2-26A0A0B4J1V2 119 aa15.14■□□□□ 0.01
PNKP-224ENST00000631020 IGHV1-69DA0A0B4J2H0 117 aa15.14■□□□□ 0.01
PNKP-224ENST00000631020 FABP12A6NFH5 140 aa15.14■□□□□ 0.01
PNKP-224ENST00000631020 IGHV1-69P01742 117 aa15.14■□□□□ 0.01
PNKP-224ENST00000631020 RNASE1P07998 156 aaKnown RBP15.14■□□□□ 0.01
PNKP-224ENST00000631020 HKR1P10072 659 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms