RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 LY6G6FQ5SQ64 297 aa15.07■□□□□ 0
CCDC28A-203ENST00000617445 C1orf100Q5SVJ3 147 aa15.07■□□□□ 0
CCDC28A-203ENST00000617445 FOXB2Q5VYV0 432 aa15.07■□□□□ 0
CCDC28A-203ENST00000617445 ZNF329Q86UD4 541 aa15.07■□□□□ 0
CCDC28A-203ENST00000617445 STPG2Q8N412 459 aa15.07■□□□□ 0
CCDC28A-203ENST00000617445 OR1L1Q8NH94 360 aa15.07■□□□□ 0
CCDC28A-203ENST00000617445 CT45A3Q8NHU0 189 aa15.07■□□□□ 0
CCDC28A-203ENST00000617445 KCNG3Q8TAE7 436 aa15.07■□□□□ 0
CCDC28A-203ENST00000617445 NEDD4LQ96PU5 975 aa15.07■□□□□ 0
CCDC28A-203ENST00000617445 OR2S2Q9NQN1 319 aa15.07■□□□□ 0
CCDC28A-203ENST00000617445 IGHV3-72A0A0B4J1Y9 119 aa15.06■□□□□ 0
CCDC28A-203ENST00000617445 LANCL1O43813 399 aa15.06■□□□□ 0
CCDC28A-203ENST00000617445 RGS11O94810 467 aa15.06■□□□□ 0
CCDC28A-203ENST00000617445 PRB2P02812 416 aaPredicted RBP15.06■□□□□ 0
CCDC28A-203ENST00000617445 CD37P11049 281 aa15.06■□□□□ 0
CCDC28A-203ENST00000617445 SRMP19623 302 aa15.06■□□□□ 0
CCDC28A-203ENST00000617445 ZNF134P52741 427 aa15.06■□□□□ 0
CCDC28A-203ENST00000617445 MORN2Q502X0 79 aa15.06■□□□□ 0
CCDC28A-203ENST00000617445 TEX38Q6PEX7 206 aa15.06■□□□□ 0
CCDC28A-203ENST00000617445 PRR18Q8N4B5 295 aa15.06■□□□□ 0
CCDC28A-203ENST00000617445 MRAPQ8TCY5 172 aa15.06■□□□□ 0
CCDC28A-203ENST00000617445 FAM46BQ96A09 425 aa15.06■□□□□ 0
CCDC28A-203ENST00000617445 NOL4LQ96MY1 436 aaPredicted RBP15.06■□□□□ 0
CCDC28A-203ENST00000617445 RASL11BQ9BPW5 248 aa15.06■□□□□ 0
CCDC28A-203ENST00000617445 TMED9Q9BVK6 235 aa15.06■□□□□ 0
CCDC28A-203ENST00000617445 JPT1Q9UK76 154 aa15.06■□□□□ 0
CCDC28A-203ENST00000617445 LSM2Q9Y333 95 aaKnown RBP15.06■□□□□ 0
CCDC28A-203ENST00000617445 TPRKBQ9Y3C4 175 aa15.06■□□□□ 0
CCDC28A-203ENST00000617445 SLC31A2O15432 143 aa15.05■□□□□ -0
CCDC28A-203ENST00000617445 MPIG6BO95866 241 aa15.05■□□□□ -0
CCDC28A-203ENST00000617445 GPR12P47775 334 aa15.05■□□□□ -0
CCDC28A-203ENST00000617445 GP2P55259 537 aaKnown RBP15.05■□□□□ -0
CCDC28A-203ENST00000617445 MED22Q15528 200 aa15.05■□□□□ -0
CCDC28A-203ENST00000617445 HSD17B12Q53GQ0 312 aa15.05■□□□□ -0
CCDC28A-203ENST00000617445 RBM48Q5RL73 367 aaKnown RBP15.05■□□□□ -0
CCDC28A-203ENST00000617445 FAM53AQ6NSI3 398 aaPredicted RBP15.05■□□□□ -0
CCDC28A-203ENST00000617445 OR2W3Q7Z3T1 314 aa15.05■□□□□ -0
CCDC28A-203ENST00000617445 CEACAM19Q7Z692 300 aa15.05■□□□□ -0
CCDC28A-203ENST00000617445 LRRTM1Q86UE6 522 aa15.05■□□□□ -0
CCDC28A-203ENST00000617445 Q8N9W7 124 aa15.05■□□□□ -0
CCDC28A-203ENST00000617445 OR10V1Q8NGI7 309 aa15.05■□□□□ -0
CCDC28A-203ENST00000617445 MRPL30Q8TCC3 161 aaKnown RBP15.05■□□□□ -0
CCDC28A-203ENST00000617445 GALMQ96C23 342 aa15.05■□□□□ -0
CCDC28A-203ENST00000617445 S1PR3Q99500 378 aa15.05■□□□□ -0
CCDC28A-203ENST00000617445 TMEM59Q9BXS4 323 aa15.05■□□□□ -0
CCDC28A-203ENST00000617445 PLSCR3Q9NRY6 295 aa15.05■□□□□ -0
CCDC28A-203ENST00000617445 AURKAIP1Q9NWT8 199 aaPredicted RBP15.05■□□□□ -0
CCDC28A-203ENST00000617445 RRP9O43818 475 aaKnown RBP15.04■□□□□ -0
CCDC28A-203ENST00000617445 YPEL1O60688 119 aa15.04■□□□□ -0
CCDC28A-203ENST00000617445 BPNT1O95861 308 aa15.04■□□□□ -0
CCDC28A-203ENST00000617445 VSIG8P0DPA2 414 aa15.04■□□□□ -0
CCDC28A-203ENST00000617445 CHATP28329 748 aa15.04■□□□□ -0
CCDC28A-203ENST00000617445 HTR2CP28335 458 aa15.04■□□□□ -0
CCDC28A-203ENST00000617445 VHLP40337 213 aa15.04■□□□□ -0
CCDC28A-203ENST00000617445 RANBP1P43487 201 aa15.04■□□□□ -0
CCDC28A-203ENST00000617445 RPS27AP62979 156 aaKnown RBP15.04■□□□□ -0
CCDC28A-203ENST00000617445 INSL4Q14641 139 aa15.04■□□□□ -0
CCDC28A-203ENST00000617445 IRF3Q14653 427 aa15.04■□□□□ -0
CCDC28A-203ENST00000617445 TRAM1Q15629 374 aa15.04■□□□□ -0
CCDC28A-203ENST00000617445 PNLIPRP3Q17RR3 467 aa15.04■□□□□ -0
CCDC28A-203ENST00000617445 LINC00482Q8N8I6 264 aa15.04■□□□□ -0
CCDC28A-203ENST00000617445 NRG4Q8WWG1 115 aa15.04■□□□□ -0
CCDC28A-203ENST00000617445 UFD1Q92890 307 aa15.04■□□□□ -0
CCDC28A-203ENST00000617445 YPEL2Q96QA6 119 aa15.04■□□□□ -0
CCDC28A-203ENST00000617445 MCRIP2Q9BUT9 160 aaKnown RBP15.04■□□□□ -0
CCDC28A-203ENST00000617445 TM2D1Q9BX74 207 aa15.04■□□□□ -0
CCDC28A-203ENST00000617445 ISYNA1Q9NPH2 558 aa15.04■□□□□ -0
CCDC28A-203ENST00000617445 SLC22A1O15245 554 aa15.03■□□□□ -0
CCDC28A-203ENST00000617445 UCHL1P09936 223 aa15.03■□□□□ -0
CCDC28A-203ENST00000617445 MYCNOSP40205 109 aa15.03■□□□□ -0
CCDC28A-203ENST00000617445 THBS3P49746 956 aa15.03■□□□□ -0
CCDC28A-203ENST00000617445 NKAPLQ5M9Q1 402 aa15.03■□□□□ -0
CCDC28A-203ENST00000617445 FAM27D1Q5T7N8 215 aa15.03■□□□□ -0
CCDC28A-203ENST00000617445 CHCHD6Q9BRQ6 235 aa15.03■□□□□ -0
CCDC28A-203ENST00000617445 ABHD14AQ9BUJ0 271 aa15.03■□□□□ -0
CCDC28A-203ENST00000617445 VCX3BQ9H321 246 aa15.03■□□□□ -0
CCDC28A-203ENST00000617445 DUSP21Q9H596 190 aa15.03■□□□□ -0
CCDC28A-203ENST00000617445 ABRACLQ9P1F3 81 aa15.03■□□□□ -0
CCDC28A-203ENST00000617445 LINC00527Q9UJ94 153 aa15.03■□□□□ -0
CCDC28A-203ENST00000617445 ZNF580Q9UK33 172 aa15.03■□□□□ -0
CCDC28A-203ENST00000617445 NUDT19A8MXV4 375 aa15.02■□□□□ -0
CCDC28A-203ENST00000617445 PSMA1P25786 263 aaKnown RBP15.02■□□□□ -0
CCDC28A-203ENST00000617445 SOX6P35712 828 aa15.02■□□□□ -0
CCDC28A-203ENST00000617445 AQP4P55087 323 aa15.02■□□□□ -0
CCDC28A-203ENST00000617445 TPBGQ13641 420 aa15.02■□□□□ -0
CCDC28A-203ENST00000617445 MRPL41Q8IXM3 137 aaKnown RBP15.02■□□□□ -0
CCDC28A-203ENST00000617445 FAM71E2Q8N5Q1 922 aa15.02■□□□□ -0
CCDC28A-203ENST00000617445 OR6M1Q8NGM8 313 aa15.02■□□□□ -0
CCDC28A-203ENST00000617445 SULT4A1Q9BR01 284 aa15.02■□□□□ -0
CCDC28A-203ENST00000617445 RIMS4Q9H426 269 aaPredicted RBP15.02■□□□□ -0
CCDC28A-203ENST00000617445 LINC01548A6NM66 108 aa15.01□□□□□ -0.01
CCDC28A-203ENST00000617445 TMEM14DPA8MWL7 114 aa15.01□□□□□ -0.01
CCDC28A-203ENST00000617445 ZNF736B4DX44 427 aaPredicted RBP15.01□□□□□ -0.01
CCDC28A-203ENST00000617445 ELANEP08246 267 aa15.01□□□□□ -0.01
CCDC28A-203ENST00000617445 MYF6P23409 242 aa15.01□□□□□ -0.01
CCDC28A-203ENST00000617445 LSAMPQ13449 338 aa15.01□□□□□ -0.01
CCDC28A-203ENST00000617445 FOXE3Q13461 319 aa15.01□□□□□ -0.01
CCDC28A-203ENST00000617445 HMGN3Q15651 99 aa15.01□□□□□ -0.01
CCDC28A-203ENST00000617445 CXorf66Q5JRM2 361 aaPredicted RBP15.01□□□□□ -0.01
CCDC28A-203ENST00000617445 LIPKQ5VXJ0 399 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 180.1 ms