RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 COMMD1Q8N668 190 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 ZNF645Q8N7E2 425 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 BPIFCQ8NFQ6 507 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 LRRC29Q8WV35 223 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 NINJ1Q92982 152 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 ABHD17AQ96GS6 310 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 RAB40CQ96S21 281 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 SMIM3Q9BZL3 60 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 UFSP2Q9NUQ7 469 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 ELOVL5Q9NYP7 299 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 ZDHHC8Q9ULC8 765 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 FZR1Q9UM11 496 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 ZFHX4Q86UP3 3567 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 CHD3Q12873 2000 aaKnown RBP10.04□□□□□ -0.8
USP6NL-206ENST00000609853 CFAP47Q6ZTR5 3102 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 KIAA2026Q5HYC2 2103 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 IGHV3-64DA0A0J9YX35 117 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 TMEM218A2RU14 115 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 C3orf80F5H4A9 247 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 ATG12O94817 140 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 OR8U9P0C7N5 309 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 SPP1P10451 314 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 PSG2P11465 335 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 GABRA2P47869 451 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 CAV2P51636 162 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 POLR2GP62487 172 aaKnown RBP eCLIP10.04□□□□□ -0.8
USP6NL-206ENST00000609853 COL10A1Q03692 680 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 MST1LQ2TV78 715 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 OR8U1Q8NH10 309 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 OR51H1Q8NH63 302 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 LYPD6BQ8NI32 183 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 NCOR1P1Q9H4R4 102 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 DUSP13Q9UII6 198 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 KCNS2Q9ULS6 477 aa10.04□□□□□ -0.8
USP6NL-206ENST00000609853 STRAPQ9Y3F4 350 aaKnown RBP10.04□□□□□ -0.8
USP6NL-206ENST00000609853 TRAV39A0A0B4J263 110 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 TRIM77I1YAP6 450 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 SSSCA1O60232 199 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 FBXO24O75426 580 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 HBZP02008 142 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 APOC3P02656 99 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 ADH4P08319 380 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 DANCRP0C864 163 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 GZMHP20718 246 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 PRDX2P32119 198 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 GATA4P43694 442 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 CEBPDP49716 269 aaPredicted RBP10.03□□□□□ -0.8
USP6NL-206ENST00000609853 TDGF1P3P51864 188 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 HTD2P86397 168 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 NHLH2Q02577 135 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 AESQ08117 197 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 CXorf66Q5JRM2 361 aaPredicted RBP10.03□□□□□ -0.8
USP6NL-206ENST00000609853 KRBOX4Q5JUW0 171 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 RPRMLQ8N4K4 120 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 DRAM1Q8N682 238 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 TMEM252Q8N6L7 170 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 RNASE11Q8TAA1 199 aaKnown RBP10.03□□□□□ -0.8
USP6NL-206ENST00000609853 TMEM171Q8WVE6 324 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 COQ2Q96H96 371 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 NARS2Q96I59 477 aaKnown RBP10.03□□□□□ -0.8
USP6NL-206ENST00000609853 COA4Q9NYJ1 87 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 LUZP4Q9P127 313 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 PPP1R3CQ9UQK1 317 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 RNF115Q9Y4L5 304 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 AKAP13Q12802 2813 aa10.03□□□□□ -0.8
USP6NL-206ENST00000609853 FAM90A26D6RGX4 464 aa10.02□□□□□ -0.8
USP6NL-206ENST00000609853 SPINT2O43291 252 aa10.02□□□□□ -0.8
USP6NL-206ENST00000609853 SCO1O75880 301 aa10.02□□□□□ -0.8
USP6NL-206ENST00000609853 RPL23AP62750 156 aaKnown RBP10.02□□□□□ -0.8
USP6NL-206ENST00000609853 CATR1Q13166 79 aa10.02□□□□□ -0.8
USP6NL-206ENST00000609853 BTNL8Q6UX41 500 aa10.02□□□□□ -0.8
USP6NL-206ENST00000609853 DOLPP1Q86YN1 238 aa10.02□□□□□ -0.8
USP6NL-206ENST00000609853 SPACA3Q8IXA5 215 aa10.02□□□□□ -0.8
USP6NL-206ENST00000609853 NUP37Q8NFH4 326 aa10.02□□□□□ -0.8
USP6NL-206ENST00000609853 OR1L1Q8NH94 360 aa10.02□□□□□ -0.8
USP6NL-206ENST00000609853 GPR146Q96CH1 333 aa10.02□□□□□ -0.8
USP6NL-206ENST00000609853 MEGF10Q96KG7 1140 aa10.02□□□□□ -0.8
USP6NL-206ENST00000609853 SNX22Q96L94 193 aa10.02□□□□□ -0.8
USP6NL-206ENST00000609853 GPHA2Q96T91 129 aa10.02□□□□□ -0.8
USP6NL-206ENST00000609853 WFDC1Q9HC57 220 aa10.02□□□□□ -0.8
USP6NL-206ENST00000609853 RAB9BQ9NP90 201 aa10.02□□□□□ -0.8
USP6NL-206ENST00000609853 TP53TG5Q9Y2B4 290 aa10.02□□□□□ -0.8
USP6NL-206ENST00000609853 WSB1Q9Y6I7 421 aa10.02□□□□□ -0.8
USP6NL-206ENST00000609853 DSPP15924 2871 aaKnown RBP10.02□□□□□ -0.81
USP6NL-206ENST00000609853 FAM24AA6NFZ4 105 aa10.02□□□□□ -0.81
USP6NL-206ENST00000609853 UMAD1C9J7I0 102 aa10.02□□□□□ -0.81
USP6NL-206ENST00000609853 MGST3O14880 152 aa10.02□□□□□ -0.81
USP6NL-206ENST00000609853 CHST1O43916 411 aa10.02□□□□□ -0.81
USP6NL-206ENST00000609853 ZNF737O75373 536 aa10.02□□□□□ -0.81
USP6NL-206ENST00000609853 LPAR6P43657 344 aa10.02□□□□□ -0.81
USP6NL-206ENST00000609853 TAS2R30P59541 319 aa10.02□□□□□ -0.81
USP6NL-206ENST00000609853 CR1LQ2VPA4 569 aa10.02□□□□□ -0.81
USP6NL-206ENST00000609853 FAM209AQ5JX71 171 aa10.02□□□□□ -0.81
USP6NL-206ENST00000609853 C10orf91Q5T1B1 145 aa10.02□□□□□ -0.81
USP6NL-206ENST00000609853 SVBPQ8N300 66 aa10.02□□□□□ -0.81
USP6NL-206ENST00000609853 CD177Q8N6Q3 437 aa10.02□□□□□ -0.81
USP6NL-206ENST00000609853 OR2V2Q96R30 315 aa10.02□□□□□ -0.81
USP6NL-206ENST00000609853 HRH4Q9H3N8 390 aa10.02□□□□□ -0.81
USP6NL-206ENST00000609853 LAMP3Q9UQV4 416 aa10.02□□□□□ -0.81
USP6NL-206ENST00000609853 CACNA1DQ01668 2161 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms