RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 RAB7AP51149 207 aa13.4□□□□□ -0.26
SSBP4-213ENST00000602088 ZNF134P52741 427 aa13.4□□□□□ -0.26
SSBP4-213ENST00000602088 EFNB2P52799 333 aa13.4□□□□□ -0.26
SSBP4-213ENST00000602088 HTD2P86397 168 aa13.4□□□□□ -0.26
SSBP4-213ENST00000602088 ZNF816Q0VGE8 651 aaPredicted RBP13.4□□□□□ -0.26
SSBP4-213ENST00000602088 HMGN3Q15651 99 aa13.4□□□□□ -0.26
SSBP4-213ENST00000602088 FBLN7Q53RD9 439 aa13.4□□□□□ -0.26
SSBP4-213ENST00000602088 PLAC9Q5JTB6 97 aa13.4□□□□□ -0.26
SSBP4-213ENST00000602088 SLC25A48Q6ZT89 311 aaKnown RBP13.4□□□□□ -0.26
SSBP4-213ENST00000602088 Q6ZTK2 550 aa13.4□□□□□ -0.26
SSBP4-213ENST00000602088 Q8N2B8 174 aa13.4□□□□□ -0.26
SSBP4-213ENST00000602088 OR2T6Q8NHC8 308 aa13.4□□□□□ -0.26
SSBP4-213ENST00000602088 ARHGAP5-AS1Q96IT6 56 aa13.4□□□□□ -0.26
SSBP4-213ENST00000602088 KCTD7Q96MP8 289 aa13.4□□□□□ -0.26
SSBP4-213ENST00000602088 CHCHD6Q9BRQ6 235 aa13.4□□□□□ -0.26
SSBP4-213ENST00000602088 PECRQ9BY49 303 aa13.4□□□□□ -0.26
SSBP4-213ENST00000602088 ZNF702PQ9H963 129 aa13.4□□□□□ -0.26
SSBP4-213ENST00000602088 OR2S2Q9NQN1 319 aa13.4□□□□□ -0.26
SSBP4-213ENST00000602088 AK3Q9UIJ7 227 aa13.4□□□□□ -0.26
SSBP4-213ENST00000602088 VWFP04275 2813 aa13.4□□□□□ -0.27
SSBP4-213ENST00000602088 TRBV6-6A0A0A6YYG2 114 aa13.39□□□□□ -0.27
SSBP4-213ENST00000602088 A0A0B4J203 849 aa13.39□□□□□ -0.27
SSBP4-213ENST00000602088 SMIM30A4D0T7 59 aa13.39□□□□□ -0.27
SSBP4-213ENST00000602088 NOTOA8MTQ0 251 aa13.39□□□□□ -0.27
SSBP4-213ENST00000602088 TIMM23O14925 209 aa13.39□□□□□ -0.27
SSBP4-213ENST00000602088 SLC31A2O15432 143 aa13.39□□□□□ -0.27
SSBP4-213ENST00000602088 SLC2A2P11168 524 aaPredicted RBP13.39□□□□□ -0.27
SSBP4-213ENST00000602088 RAB6AP20340 208 aa13.39□□□□□ -0.27
SSBP4-213ENST00000602088 MORN2Q502X0 79 aa13.39□□□□□ -0.27
SSBP4-213ENST00000602088 CT45A1Q5HYN5 189 aa13.39□□□□□ -0.27
SSBP4-213ENST00000602088 STEAP3Q658P3 488 aa13.39□□□□□ -0.27
SSBP4-213ENST00000602088 C11orf88Q6PI97 169 aa13.39□□□□□ -0.27
SSBP4-213ENST00000602088 C16orf82Q7Z2V1 217 aa13.39□□□□□ -0.27
SSBP4-213ENST00000602088 THNSL2Q86YJ6 484 aa13.39□□□□□ -0.27
SSBP4-213ENST00000602088 OR8H3Q8N146 312 aa13.39□□□□□ -0.27
SSBP4-213ENST00000602088 OR52L2PQ8NGH6 319 aa13.39□□□□□ -0.27
SSBP4-213ENST00000602088 OR10V1Q8NGI7 309 aa13.39□□□□□ -0.27
SSBP4-213ENST00000602088 CT45A3Q8NHU0 189 aa13.39□□□□□ -0.27
SSBP4-213ENST00000602088 CAPSLQ8WWF8 208 aa13.39□□□□□ -0.27
SSBP4-213ENST00000602088 CFHR4Q92496 578 aa13.39□□□□□ -0.27
SSBP4-213ENST00000602088 ST6GALNAC6Q969X2 333 aa13.39□□□□□ -0.27
SSBP4-213ENST00000602088 PTX4Q96A99 478 aa13.39□□□□□ -0.27
SSBP4-213ENST00000602088 HDHD3Q9BSH5 251 aaPredicted RBP13.39□□□□□ -0.27
SSBP4-213ENST00000602088 CHMP1AQ9HD42 196 aaPredicted RBP13.39□□□□□ -0.27
SSBP4-213ENST00000602088 HSD17B6O14756 317 aa13.38□□□□□ -0.27
SSBP4-213ENST00000602088 GAPDHP04406 335 aaKnown RBP13.38□□□□□ -0.27
SSBP4-213ENST00000602088 FAM106CPP0CH98 169 aa13.38□□□□□ -0.27
SSBP4-213ENST00000602088 SDC2P34741 201 aa13.38□□□□□ -0.27
SSBP4-213ENST00000602088 BLCAPP62952 87 aa13.38□□□□□ -0.27
SSBP4-213ENST00000602088 HABP2Q14520 560 aaPredicted RBP13.38□□□□□ -0.27
SSBP4-213ENST00000602088 GNMTQ14749 295 aa13.38□□□□□ -0.27
SSBP4-213ENST00000602088 MOB1BQ7L9L4 216 aa13.38□□□□□ -0.27
SSBP4-213ENST00000602088 DRAM1Q8N682 238 aa13.38□□□□□ -0.27
SSBP4-213ENST00000602088 OR56B4Q8NH76 319 aa13.38□□□□□ -0.27
SSBP4-213ENST00000602088 GALMQ96C23 342 aa13.38□□□□□ -0.27
SSBP4-213ENST00000602088 AKR1E2Q96JD6 320 aa13.38□□□□□ -0.27
SSBP4-213ENST00000602088 RBM14Q96PK6 669 aaKnown RBP13.38□□□□□ -0.27
SSBP4-213ENST00000602088 SLC25A33Q9BSK2 321 aa13.38□□□□□ -0.27
SSBP4-213ENST00000602088 PRSS22Q9GZN4 317 aa13.38□□□□□ -0.27
SSBP4-213ENST00000602088 RNF167Q9H6Y7 350 aa13.38□□□□□ -0.27
SSBP4-213ENST00000602088 ZNF696Q9H7X3 374 aa13.38□□□□□ -0.27
SSBP4-213ENST00000602088 ABRACLQ9P1F3 81 aa13.38□□□□□ -0.27
SSBP4-213ENST00000602088 JPT1Q9UK76 154 aa13.38□□□□□ -0.27
SSBP4-213ENST00000602088 MGAM2Q2M2H8 2515 aa13.38□□□□□ -0.27
SSBP4-213ENST00000602088 IGHV1-3A0A0C4DH29 117 aa13.37□□□□□ -0.27
SSBP4-213ENST00000602088 LOC100506127A0A0U1RQW1 187 aa13.37□□□□□ -0.27
SSBP4-213ENST00000602088 TRIM64CA6NLI5 447 aa13.37□□□□□ -0.27
SSBP4-213ENST00000602088 YPEL1O60688 119 aa13.37□□□□□ -0.27
SSBP4-213ENST00000602088 OR2F2O95006 317 aa13.37□□□□□ -0.27
SSBP4-213ENST00000602088 IL3RAP26951 378 aa13.37□□□□□ -0.27
SSBP4-213ENST00000602088 PPP1CCP36873 323 aaKnown RBP13.37□□□□□ -0.27
SSBP4-213ENST00000602088 ZNF137PP52743 207 aa13.37□□□□□ -0.27
SSBP4-213ENST00000602088 MOGAT2Q3SYC2 334 aa13.37□□□□□ -0.27
SSBP4-213ENST00000602088 LY6G6FQ5SQ64 297 aa13.37□□□□□ -0.27
SSBP4-213ENST00000602088 Q6ZS46 218 aa13.37□□□□□ -0.27
SSBP4-213ENST00000602088 OR10R2Q8NGX6 335 aa13.37□□□□□ -0.27
SSBP4-213ENST00000602088 SETD6Q8TBK2 473 aa13.37□□□□□ -0.27
SSBP4-213ENST00000602088 RTN4IP1Q8WWV3 396 aaPredicted RBP13.37□□□□□ -0.27
SSBP4-213ENST00000602088 RAB3CQ96E17 227 aa13.37□□□□□ -0.27
SSBP4-213ENST00000602088 YPEL2Q96QA6 119 aa13.37□□□□□ -0.27
SSBP4-213ENST00000602088 CMSS1Q9BQ75 279 aaKnown RBP13.37□□□□□ -0.27
SSBP4-213ENST00000602088 CENPOQ9BU64 300 aa13.37□□□□□ -0.27
SSBP4-213ENST00000602088 VCX3AQ9NNX9 186 aa13.37□□□□□ -0.27
SSBP4-213ENST00000602088 C12orf4Q9NQ89 552 aa13.37□□□□□ -0.27
SSBP4-213ENST00000602088 SERTAD4Q9NUC0 356 aa13.37□□□□□ -0.27
SSBP4-213ENST00000602088 KCNK7Q9Y2U2 307 aa13.37□□□□□ -0.27
SSBP4-213ENST00000602088 METTL21EPA6NDL7 271 aa13.36□□□□□ -0.27
SSBP4-213ENST00000602088 RAB27BO00194 218 aa13.36□□□□□ -0.27
SSBP4-213ENST00000602088 SNRNP70P08621 437 aaKnown RBP13.36□□□□□ -0.27
SSBP4-213ENST00000602088 CLEC2LP0C7M8 214 aa13.36□□□□□ -0.27
SSBP4-213ENST00000602088 REG1BP48304 166 aa13.36□□□□□ -0.27
SSBP4-213ENST00000602088 SFXN4Q6P4A7 337 aa13.36□□□□□ -0.27
SSBP4-213ENST00000602088 Q9N2K0 584 aa13.36□□□□□ -0.27
SSBP4-213ENST00000602088 DAPK2Q9UIK4 370 aa13.36□□□□□ -0.27
SSBP4-213ENST00000602088 MGAT4AQ9UM21 535 aa13.36□□□□□ -0.27
SSBP4-213ENST00000602088 TRRAPQ9Y4A5 3859 aa13.35□□□□□ -0.27
SSBP4-213ENST00000602088 RGS11O94810 467 aa13.35□□□□□ -0.27
SSBP4-213ENST00000602088 AMY1AP04745 511 aa13.35□□□□□ -0.27
SSBP4-213ENST00000602088 AMY2AP04746 511 aa13.35□□□□□ -0.27
SSBP4-213ENST00000602088 MXD1Q05195 221 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms