RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 SURF2Q15527 256 aaPredicted RBP15.3■□□□□ 0.04
SSBP4-212ENST00000601919 LPCAT3Q6P1A2 487 aa15.3■□□□□ 0.04
SSBP4-212ENST00000601919 CCBE1Q6UXH8 406 aaPredicted RBP15.3■□□□□ 0.04
SSBP4-212ENST00000601919 C5orf24Q7Z6I8 188 aa15.3■□□□□ 0.04
SSBP4-212ENST00000601919 LHFPL1Q86WI0 220 aa15.3■□□□□ 0.04
SSBP4-212ENST00000601919 CENPSQ8N2Z9 138 aa15.3■□□□□ 0.04
SSBP4-212ENST00000601919 EDARADDQ8WWZ3 215 aa15.3■□□□□ 0.04
SSBP4-212ENST00000601919 CREB3L1Q96BA8 519 aa15.3■□□□□ 0.04
SSBP4-212ENST00000601919 MOB3AQ96BX8 217 aa15.3■□□□□ 0.04
SSBP4-212ENST00000601919 RDH8Q9NYR8 311 aa15.3■□□□□ 0.04
SSBP4-212ENST00000601919 OR1A1Q9P1Q5 309 aa15.3■□□□□ 0.04
SSBP4-212ENST00000601919 POLR3KQ9Y2Y1 108 aaPredicted RBP15.3■□□□□ 0.04
SSBP4-212ENST00000601919 OR2W1Q9Y3N9 320 aa15.3■□□□□ 0.04
SSBP4-212ENST00000601919 C17orf98A8MV24 154 aa15.29■□□□□ 0.04
SSBP4-212ENST00000601919 M0R1W7 72 aa15.29■□□□□ 0.04
SSBP4-212ENST00000601919 YPEL1O60688 119 aa15.29■□□□□ 0.04
SSBP4-212ENST00000601919 AADACP22760 399 aa15.29■□□□□ 0.04
SSBP4-212ENST00000601919 DLX6P56179 175 aa15.29■□□□□ 0.04
SSBP4-212ENST00000601919 LCN2P80188 198 aa15.29■□□□□ 0.04
SSBP4-212ENST00000601919 LOXL1Q08397 574 aaPredicted RBP15.29■□□□□ 0.04
SSBP4-212ENST00000601919 LTC4SQ16873 150 aa15.29■□□□□ 0.04
SSBP4-212ENST00000601919 LY6G6FQ5SQ64 297 aa15.29■□□□□ 0.04
SSBP4-212ENST00000601919 BTNL3Q6UXE8 466 aa15.29■□□□□ 0.04
SSBP4-212ENST00000601919 KIR3DL3Q8N743 410 aa15.29■□□□□ 0.04
SSBP4-212ENST00000601919 ZDHHC22Q8N966 263 aa15.29■□□□□ 0.04
SSBP4-212ENST00000601919 OR52L2PQ8NGH6 319 aa15.29■□□□□ 0.04
SSBP4-212ENST00000601919 YPEL2Q96QA6 119 aa15.29■□□□□ 0.04
SSBP4-212ENST00000601919 TMPRSS13Q9BYE2 586 aa15.29■□□□□ 0.04
SSBP4-212ENST00000601919 GFOD1Q9NXC2 390 aa15.29■□□□□ 0.04
SSBP4-212ENST00000601919 ONECUT1Q9UBC0 465 aa15.29■□□□□ 0.04
SSBP4-212ENST00000601919 RBM7Q9Y580 266 aaKnown RBP15.29■□□□□ 0.04
SSBP4-212ENST00000601919 POLQO75417 2590 aa15.28■□□□□ 0.04
SSBP4-212ENST00000601919 IGHV2-70DA0A0C4DH43 119 aa15.28■□□□□ 0.04
SSBP4-212ENST00000601919 PGAM2P15259 253 aa15.28■□□□□ 0.04
SSBP4-212ENST00000601919 OMGP23515 440 aa15.28■□□□□ 0.04
SSBP4-212ENST00000601919 NFYBP25208 207 aa15.28■□□□□ 0.04
SSBP4-212ENST00000601919 ZFP36P26651 326 aaKnown RBP15.28■□□□□ 0.04
SSBP4-212ENST00000601919 LUMP51884 338 aaPredicted RBP15.28■□□□□ 0.04
SSBP4-212ENST00000601919 UCP3P55916 312 aa15.28■□□□□ 0.04
SSBP4-212ENST00000601919 LOXL3P58215 753 aa15.28■□□□□ 0.04
SSBP4-212ENST00000601919 Q3ZCU0 254 aa15.28■□□□□ 0.04
SSBP4-212ENST00000601919 PRAMEF5Q5TYX0 476 aa15.28■□□□□ 0.04
SSBP4-212ENST00000601919 AADACL3Q5VUY0 350 aa15.28■□□□□ 0.04
SSBP4-212ENST00000601919 C1orf122Q6ZSJ8 110 aa15.28■□□□□ 0.04
SSBP4-212ENST00000601919 OR13C8Q8NGS7 320 aa15.28■□□□□ 0.04
SSBP4-212ENST00000601919 ZFAND1Q8TCF1 268 aa15.28■□□□□ 0.04
SSBP4-212ENST00000601919 C20orf85Q9H1P6 137 aa15.28■□□□□ 0.04
SSBP4-212ENST00000601919 NUDT15Q9NV35 164 aa15.28■□□□□ 0.04
SSBP4-212ENST00000601919 SESN1Q9Y6P5 492 aa15.28■□□□□ 0.04
SSBP4-212ENST00000601919 IGHV3-43A0A0B4J1X8 118 aa15.27■□□□□ 0.04
SSBP4-212ENST00000601919 OR5H14A6NHG9 310 aa15.27■□□□□ 0.04
SSBP4-212ENST00000601919 ITGB1BP1O14713 200 aa15.27■□□□□ 0.04
SSBP4-212ENST00000601919 H2AFB2P0C5Z0 115 aa15.27■□□□□ 0.04
SSBP4-212ENST00000601919 IGHV3-43DP0DP04 118 aa15.27■□□□□ 0.04
SSBP4-212ENST00000601919 PPP1CCP36873 323 aaKnown RBP15.27■□□□□ 0.04
SSBP4-212ENST00000601919 RAG2P55895 527 aa15.27■□□□□ 0.04
SSBP4-212ENST00000601919 FXYD4P59646 89 aa15.27■□□□□ 0.04
SSBP4-212ENST00000601919 ERVFRD-1P60508 538 aa15.27■□□□□ 0.04
SSBP4-212ENST00000601919 MORN2Q502X0 79 aa15.27■□□□□ 0.04
SSBP4-212ENST00000601919 SLC38A6Q8IZM9 456 aa15.27■□□□□ 0.04
SSBP4-212ENST00000601919 OR2AK2Q8NG84 335 aa15.27■□□□□ 0.04
SSBP4-212ENST00000601919 OR10V1Q8NGI7 309 aa15.27■□□□□ 0.04
SSBP4-212ENST00000601919 TOMM40LQ969M1 308 aa15.27■□□□□ 0.04
SSBP4-212ENST00000601919 Q96MF0 132 aa15.27■□□□□ 0.04
SSBP4-212ENST00000601919 REG4Q9BYZ8 158 aa15.27■□□□□ 0.04
SSBP4-212ENST00000601919 C14orf166Q9Y224 244 aaKnown RBP15.27■□□□□ 0.04
SSBP4-212ENST00000601919 KPTNQ9Y664 436 aa15.27■□□□□ 0.04
SSBP4-212ENST00000601919 UNC79Q9P2D8 2635 aa15.27■□□□□ 0.03
SSBP4-212ENST00000601919 TRAV6A0A075B6T7 132 aa15.26■□□□□ 0.03
SSBP4-212ENST00000601919 B4DSR2 109 aa15.26■□□□□ 0.03
SSBP4-212ENST00000601919 FAM157AC9JC47 383 aa15.26■□□□□ 0.03
SSBP4-212ENST00000601919 SLC22A5O76082 557 aa15.26■□□□□ 0.03
SSBP4-212ENST00000601919 RLN1P04808 185 aa15.26■□□□□ 0.03
SSBP4-212ENST00000601919 IGHV1-8P0DP01 117 aa15.26■□□□□ 0.03
SSBP4-212ENST00000601919 SPNP16150 400 aa15.26■□□□□ 0.03
SSBP4-212ENST00000601919 S100GP29377 79 aa15.26■□□□□ 0.03
SSBP4-212ENST00000601919 RAB7AP51149 207 aa15.26■□□□□ 0.03
SSBP4-212ENST00000601919 GNMTQ14749 295 aa15.26■□□□□ 0.03
SSBP4-212ENST00000601919 GLCCI1Q86VQ1 547 aa15.26■□□□□ 0.03
SSBP4-212ENST00000601919 MARCH1Q8TCQ1 289 aa15.26■□□□□ 0.03
SSBP4-212ENST00000601919 MARVELD1Q9BSK0 173 aa15.26■□□□□ 0.03
SSBP4-212ENST00000601919 SLC5A7Q9GZV3 580 aa15.26■□□□□ 0.03
SSBP4-212ENST00000601919 MMP28Q9H239 520 aa15.26■□□□□ 0.03
SSBP4-212ENST00000601919 METTL8Q9H825 291 aaKnown RBP15.26■□□□□ 0.03
SSBP4-212ENST00000601919 RNF223E7ERA6 249 aa15.25■□□□□ 0.03
SSBP4-212ENST00000601919 INMT-MINDY4F8WBC2 141 aa15.25■□□□□ 0.03
SSBP4-212ENST00000601919 ARPC1BO15143 372 aaKnown RBP15.25■□□□□ 0.03
SSBP4-212ENST00000601919 DHFRP00374 187 aa15.25■□□□□ 0.03
SSBP4-212ENST00000601919 METTL11BQ5VVY1 283 aa15.25■□□□□ 0.03
SSBP4-212ENST00000601919 SECTM1Q8WVN6 248 aa15.25■□□□□ 0.03
SSBP4-212ENST00000601919 ZNF486Q96H40 463 aaPredicted RBP15.25■□□□□ 0.03
SSBP4-212ENST00000601919 C1orf159Q96HA4 380 aa15.25■□□□□ 0.03
SSBP4-212ENST00000601919 FXYD6Q9H0Q3 95 aa15.25■□□□□ 0.03
SSBP4-212ENST00000601919 GHITMQ9H3K2 345 aa15.25■□□□□ 0.03
SSBP4-212ENST00000601919 HECTD1Q9ULT8 2610 aa15.25■□□□□ 0.03
SSBP4-212ENST00000601919 A0A087X0M5 115 aa15.24■□□□□ 0.03
SSBP4-212ENST00000601919 A0A096LNT2 108 aa15.24■□□□□ 0.03
SSBP4-212ENST00000601919 A0A1B0GX30 115 aa15.24■□□□□ 0.03
SSBP4-212ENST00000601919 PEX14O75381 377 aa15.24■□□□□ 0.03
SSBP4-212ENST00000601919 MMP23AO75900 390 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms