RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 LIN7BQ9HAP6 207 aa8.13□□□□□ -1.11
TPM4-207ENST00000588032 OR2S2Q9NQN1 319 aa8.13□□□□□ -1.11
TPM4-207ENST00000588032 JPT1Q9UK76 154 aa8.13□□□□□ -1.11
TPM4-207ENST00000588032 KIAA2026Q5HYC2 2103 aa8.12□□□□□ -1.11
TPM4-207ENST00000588032 A0A0A6YYD4 124 aa8.12□□□□□ -1.11
TPM4-207ENST00000588032 YPEL1O60688 119 aa8.12□□□□□ -1.11
TPM4-207ENST00000588032 IGHV3-7P01780 117 aa8.12□□□□□ -1.11
TPM4-207ENST00000588032 JUNBP17275 347 aaPredicted RBP8.12□□□□□ -1.11
TPM4-207ENST00000588032 TMEM50BP56557 158 aa8.12□□□□□ -1.11
TPM4-207ENST00000588032 SCAND1P57086 179 aa8.12□□□□□ -1.11
TPM4-207ENST00000588032 PROK1P58294 105 aa8.12□□□□□ -1.11
TPM4-207ENST00000588032 MRPS15P82914 257 aaKnown RBP8.12□□□□□ -1.11
TPM4-207ENST00000588032 ZNF816Q0VGE8 651 aaPredicted RBP8.12□□□□□ -1.11
TPM4-207ENST00000588032 HMGN3Q15651 99 aa8.12□□□□□ -1.11
TPM4-207ENST00000588032 MORN2Q502X0 79 aa8.12□□□□□ -1.11
TPM4-207ENST00000588032 ZNF880Q6PDB4 577 aa8.12□□□□□ -1.11
TPM4-207ENST00000588032 CCBE1Q6UXH8 406 aaPredicted RBP8.12□□□□□ -1.11
TPM4-207ENST00000588032 SLC25A48Q6ZT89 311 aaKnown RBP8.12□□□□□ -1.11
TPM4-207ENST00000588032 OR10R2Q8NGX6 335 aa8.12□□□□□ -1.11
TPM4-207ENST00000588032 OR1L1Q8NH94 360 aa8.12□□□□□ -1.11
TPM4-207ENST00000588032 CAPSLQ8WWF8 208 aa8.12□□□□□ -1.11
TPM4-207ENST00000588032 WFDC12Q8WWY7 111 aa8.12□□□□□ -1.11
TPM4-207ENST00000588032 RAB3CQ96E17 227 aa8.12□□□□□ -1.11
TPM4-207ENST00000588032 ARHGAP5-AS1Q96IT6 56 aa8.12□□□□□ -1.11
TPM4-207ENST00000588032 YPEL2Q96QA6 119 aa8.12□□□□□ -1.11
TPM4-207ENST00000588032 CENPOQ9BU64 300 aa8.12□□□□□ -1.11
TPM4-207ENST00000588032 PECRQ9BY49 303 aa8.12□□□□□ -1.11
TPM4-207ENST00000588032 PRSS22Q9GZN4 317 aa8.12□□□□□ -1.11
TPM4-207ENST00000588032 CHMP1AQ9HD42 196 aaPredicted RBP8.12□□□□□ -1.11
TPM4-207ENST00000588032 C12orf4Q9NQ89 552 aa8.12□□□□□ -1.11
TPM4-207ENST00000588032 AK3Q9UIJ7 227 aa8.12□□□□□ -1.11
TPM4-207ENST00000588032 IGHV3-43A0A0B4J1X8 118 aa8.11□□□□□ -1.11
TPM4-207ENST00000588032 LOC100506127A0A0U1RQW1 187 aa8.11□□□□□ -1.11
TPM4-207ENST00000588032 TRIM64CA6NLI5 447 aa8.11□□□□□ -1.11
TPM4-207ENST00000588032 FAM90A9PA6NNJ1 464 aa8.11□□□□□ -1.11
TPM4-207ENST00000588032 SERPINE3A8MV23 424 aa8.11□□□□□ -1.11
TPM4-207ENST00000588032 M0QZK8 103 aa8.11□□□□□ -1.11
TPM4-207ENST00000588032 LCE2BO14633 110 aa8.11□□□□□ -1.11
TPM4-207ENST00000588032 HSD17B6O14756 317 aa8.11□□□□□ -1.11
TPM4-207ENST00000588032 TXNL1O43396 289 aa8.11□□□□□ -1.11
TPM4-207ENST00000588032 CHST1O43916 411 aa8.11□□□□□ -1.11
TPM4-207ENST00000588032 SCGNO76038 276 aa8.11□□□□□ -1.11
TPM4-207ENST00000588032 OR2F2O95006 317 aa8.11□□□□□ -1.11
TPM4-207ENST00000588032 IGHV3-43DP0DP04 118 aa8.11□□□□□ -1.11
TPM4-207ENST00000588032 SDC2P34741 201 aa8.11□□□□□ -1.11
TPM4-207ENST00000588032 ZNF137PP52743 207 aa8.11□□□□□ -1.11
TPM4-207ENST00000588032 NR2C2APQ86WQ0 139 aa8.11□□□□□ -1.11
TPM4-207ENST00000588032 CROCCP3Q8IVE0 287 aa8.11□□□□□ -1.11
TPM4-207ENST00000588032 Q8N2B8 174 aa8.11□□□□□ -1.11
TPM4-207ENST00000588032 ZNF439Q8NDP4 499 aa8.11□□□□□ -1.11
TPM4-207ENST00000588032 UBALD1Q8TB05 177 aa8.11□□□□□ -1.11
TPM4-207ENST00000588032 RBM14Q96PK6 669 aaKnown RBP8.11□□□□□ -1.11
TPM4-207ENST00000588032 CMSS1Q9BQ75 279 aaKnown RBP8.11□□□□□ -1.11
TPM4-207ENST00000588032 GHITMQ9H3K2 345 aa8.11□□□□□ -1.11
TPM4-207ENST00000588032 A0A1W2PPE3 182 aa8.1□□□□□ -1.11
TPM4-207ENST00000588032 A0A1W2PPI3 338 aa8.1□□□□□ -1.11
TPM4-207ENST00000588032 RAB27BO00194 218 aa8.1□□□□□ -1.11
TPM4-207ENST00000588032 TIMM23O14925 209 aa8.1□□□□□ -1.11
TPM4-207ENST00000588032 AIREO43918 545 aa8.1□□□□□ -1.11
TPM4-207ENST00000588032 CD3GP09693 182 aa8.1□□□□□ -1.11
TPM4-207ENST00000588032 SLC2A2P11168 524 aaPredicted RBP8.1□□□□□ -1.11
TPM4-207ENST00000588032 ZNF134P52741 427 aa8.1□□□□□ -1.11
TPM4-207ENST00000588032 HABP2Q14520 560 aaPredicted RBP8.1□□□□□ -1.11
TPM4-207ENST00000588032 CT45A1Q5HYN5 189 aa8.1□□□□□ -1.11
TPM4-207ENST00000588032 PLAC9Q5JTB6 97 aa8.1□□□□□ -1.11
TPM4-207ENST00000588032 SFXN4Q6P4A7 337 aa8.1□□□□□ -1.11
TPM4-207ENST00000588032 TMEM219Q86XT9 240 aa8.1□□□□□ -1.11
TPM4-207ENST00000588032 OR52L2PQ8NGH6 319 aa8.1□□□□□ -1.11
TPM4-207ENST00000588032 OR10V1Q8NGI7 309 aa8.1□□□□□ -1.11
TPM4-207ENST00000588032 CT45A3Q8NHU0 189 aa8.1□□□□□ -1.11
TPM4-207ENST00000588032 SETD6Q8TBK2 473 aa8.1□□□□□ -1.11
TPM4-207ENST00000588032 ST6GALNAC6Q969X2 333 aa8.1□□□□□ -1.11
TPM4-207ENST00000588032 YIPF6Q96EC8 236 aa8.1□□□□□ -1.11
TPM4-207ENST00000588032 SLC25A33Q9BSK2 321 aa8.1□□□□□ -1.11
TPM4-207ENST00000588032 ATG5Q9H1Y0 275 aa8.1□□□□□ -1.11
TPM4-207ENST00000588032 Q9N2K0 584 aa8.1□□□□□ -1.11
TPM4-207ENST00000588032 DAPK2Q9UIK4 370 aa8.1□□□□□ -1.11
TPM4-207ENST00000588032 IGHV1-3A0A0C4DH29 117 aa8.09□□□□□ -1.11
TPM4-207ENST00000588032 TRDCB7Z8K6 153 aa8.09□□□□□ -1.11
TPM4-207ENST00000588032 ITGB1BP1O14713 200 aa8.09□□□□□ -1.11
TPM4-207ENST00000588032 LANCL1O43813 399 aa8.09□□□□□ -1.11
TPM4-207ENST00000588032 SNRNP70P08621 437 aaKnown RBP8.09□□□□□ -1.11
TPM4-207ENST00000588032 HIST1H1DP16402 221 aaKnown RBP8.09□□□□□ -1.11
TPM4-207ENST00000588032 ZBTB25P24278 435 aa8.09□□□□□ -1.11
TPM4-207ENST00000588032 CD24P25063 80 aa8.09□□□□□ -1.11
TPM4-207ENST00000588032 EFNB2P52799 333 aa8.09□□□□□ -1.11
TPM4-207ENST00000588032 MXD1Q05195 221 aa8.09□□□□□ -1.11
TPM4-207ENST00000588032 PLA2G7Q13093 441 aa8.09□□□□□ -1.11
TPM4-207ENST00000588032 EBI3Q14213 229 aa8.09□□□□□ -1.11
TPM4-207ENST00000588032 KIR2DS1Q14954 304 aa8.09□□□□□ -1.11
TPM4-207ENST00000588032 SRSF7Q16629 238 aaKnown RBP eCLIP8.09□□□□□ -1.11
TPM4-207ENST00000588032 MOB3BQ86TA1 216 aa8.09□□□□□ -1.11
TPM4-207ENST00000588032 DRAM1Q8N682 238 aa8.09□□□□□ -1.11
TPM4-207ENST00000588032 OR2AK2Q8NG84 335 aa8.09□□□□□ -1.11
TPM4-207ENST00000588032 OR56B4Q8NH76 319 aa8.09□□□□□ -1.11
TPM4-207ENST00000588032 RTN4IP1Q8WWV3 396 aaPredicted RBP8.09□□□□□ -1.11
TPM4-207ENST00000588032 IL1F10Q8WWZ1 152 aa8.09□□□□□ -1.11
TPM4-207ENST00000588032 CFHR4Q92496 578 aa8.09□□□□□ -1.11
TPM4-207ENST00000588032 CITED1Q99966 193 aa8.09□□□□□ -1.11
TPM4-207ENST00000588032 ABHD14AQ9BUJ0 271 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms