RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 PHLDA2Q53GA4 152 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 ESCO2Q56NI9 601 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 SPRNQ5BIV9 151 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 FAM201AQ5SY85 155 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 AADACL3Q5VUY0 350 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 THOC7Q6I9Y2 204 aaKnown RBP5.16□□□□□ -1.58
LIG3-206ENST00000586058 C11orf71Q6IPW1 123 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 KCTD9Q7L273 389 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 H1FOOQ8IZA3 346 aaPredicted RBP5.16□□□□□ -1.58
LIG3-206ENST00000586058 LGI3Q8N145 548 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 ZNF645Q8N7E2 425 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 TPRX1Q8N7U7 411 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 ZBTB34Q8NCN2 500 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 OR10A7Q8NGE5 316 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 OR52B4Q8NGK2 314 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 OR13A1Q8NGR1 328 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 CAPSLQ8WWF8 208 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 RTN4IP1Q8WWV3 396 aaPredicted RBP5.16□□□□□ -1.58
LIG3-206ENST00000586058 COQ2Q96H96 371 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 SPIN2AQ99865 258 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 SPIN2BQ9BPZ2 258 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 PIMREGQ9BSJ6 248 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 RSRP1Q9BUV0 290 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 TMPRSS13Q9BYE2 586 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 ZNF436Q9C0F3 470 aaPredicted RBP5.16□□□□□ -1.58
LIG3-206ENST00000586058 OR2D2Q9H210 308 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 GHITMQ9H3K2 345 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 RANBP3Q9H6Z4 567 aaPredicted RBP5.16□□□□□ -1.58
LIG3-206ENST00000586058 NAA60Q9H7X0 242 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 PLEKHF2Q9H8W4 249 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 CALYQ9NYX4 217 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 KAAG1Q9UBP8 84 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 CLN8Q9UBY8 286 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 PRRC2CQ9Y520 2896 aaKnown RBP5.16□□□□□ -1.58
LIG3-206ENST00000586058 ICE1Q9Y2F5 2266 aa5.15□□□□□ -1.58
LIG3-206ENST00000586058 A0A0B4J2A0 478 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 C3orf85A0A1B0GTC6 90 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 DUXBA0A1W2PPF3 345 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 A1L4Q6 167 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 CRYM-AS1A6NIL9 109 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 DVL1O14640 695 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 IGHV2-70P01814 119 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 SERPINE2P07093 398 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 SOD3P08294 240 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 GIPP09681 153 aaPredicted RBP5.15□□□□□ -1.59
LIG3-206ENST00000586058 SULT1A3P0DMM9 295 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 SULT1A4P0DMN0 295 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 PI3P19957 117 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 NFYBP25208 207 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 GNRHRP30968 328 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 SSTR5P35346 364 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 NUP62P37198 522 aaPredicted RBP5.15□□□□□ -1.59
LIG3-206ENST00000586058 TMEM33P57088 247 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 RAP2BP61225 183 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 RND3P61587 244 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 HERPUD1Q15011 391 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 FCN2Q15485 313 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 MSMO1Q15800 293 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 LTC4SQ16873 150 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 AVPI1Q5T686 147 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 CLEC2AQ6UVW9 174 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 ZNF695Q8IW36 515 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 TCTE3Q8IZS6 198 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 TCTEX1D1Q8N7M0 179 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 OR1L1Q8NH94 360 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 MITD1Q8WV92 249 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 HYLS1Q96M11 299 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 TMEM246Q9BRR3 403 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 SHARPINQ9H0F6 387 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 C5orf66Q9H5L9 145 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 ZFP57Q9NU63 452 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 IDI2-AS1Q9NZ38 188 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 OR1A1Q9P1Q5 309 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 SHPKQ9UHJ6 478 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 MAB21L2Q9Y586 359 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 ACACBO00763 2458 aa5.15□□□□□ -1.59
LIG3-206ENST00000586058 ATRXP46100 2492 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 ANKHD1Q8IWZ3 2542 aaKnown RBP5.14□□□□□ -1.59
LIG3-206ENST00000586058 IGHV3-43A0A0B4J1X8 118 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 TRAV39A0A0B4J263 110 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 KBTBD11-OT1A0A1B0GTJ5 212 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 C13orf42A0A1B0GVH6 325 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 PRSS47A8MTI9 375 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 A8MV72 311 aaPredicted RBP5.14□□□□□ -1.59
LIG3-206ENST00000586058 H0Y980 276 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 NDUFS8O00217 210 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 TOR1AO14656 332 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 MPPED1O15442 326 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 YPEL1O60688 119 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 TUSC2O75896 110 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 C1QBP02746 253 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 TFF1P04155 84 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 LIPFP07098 398 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 OR8U9P0C7N5 309 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 IGHV3-43DP0DP04 118 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 VSIG10L2P0DP72 767 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 RPA2P15927 270 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 DNASE1P24855 282 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 SSTR2P30874 369 aa5.14□□□□□ -1.59
LIG3-206ENST00000586058 PPP1CCP36873 323 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms