RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 MUC1P15941 1255 aaPredicted RBP17.04■□□□□ 0.32
SMG8-203ENST00000578922 GNLYP22749 145 aa17.04■□□□□ 0.32
SMG8-203ENST00000578922 LPAR6P43657 344 aa17.04■□□□□ 0.32
SMG8-203ENST00000578922 MZT1Q08AG7 82 aa17.04■□□□□ 0.32
SMG8-203ENST00000578922 FBXL19-AS1Q494R0 122 aa17.04■□□□□ 0.32
SMG8-203ENST00000578922 SSX8Q7RTT4 187 aa17.04■□□□□ 0.32
SMG8-203ENST00000578922 LINC00518Q8N0U6 118 aa17.04■□□□□ 0.32
SMG8-203ENST00000578922 UBAC2Q8NBM4 344 aa17.04■□□□□ 0.32
SMG8-203ENST00000578922 LRRC29Q8WV35 223 aa17.04■□□□□ 0.32
SMG8-203ENST00000578922 ITLN1Q8WWA0 313 aa17.04■□□□□ 0.32
SMG8-203ENST00000578922 SUCNR1Q9BXA5 334 aa17.04■□□□□ 0.32
SMG8-203ENST00000578922 ESRP2Q9H6T0 727 aaKnown RBP17.04■□□□□ 0.32
SMG8-203ENST00000578922 SPACA1Q9HBV2 294 aa17.04■□□□□ 0.32
SMG8-203ENST00000578922 KCNJ16Q9NPI9 418 aa17.04■□□□□ 0.32
SMG8-203ENST00000578922 CFAP46Q8IYW2 2715 aa17.03■□□□□ 0.32
SMG8-203ENST00000578922 E5RGE8 158 aa17.03■□□□□ 0.32
SMG8-203ENST00000578922 ZNF728P0DKX0 622 aa17.03■□□□□ 0.32
SMG8-203ENST00000578922 CD200P41217 278 aa17.03■□□□□ 0.32
SMG8-203ENST00000578922 MOGAT3Q86VF5 341 aa17.03■□□□□ 0.32
SMG8-203ENST00000578922 LYPD6BQ8NI32 183 aa17.03■□□□□ 0.32
SMG8-203ENST00000578922 MEGF10Q96KG7 1140 aa17.03■□□□□ 0.32
SMG8-203ENST00000578922 NAA60Q9H7X0 242 aa17.03■□□□□ 0.32
SMG8-203ENST00000578922 ZNF286AQ9HBT8 521 aa17.03■□□□□ 0.32
SMG8-203ENST00000578922 NSG2Q9Y328 171 aa17.03■□□□□ 0.32
SMG8-203ENST00000578922 PKDREJQ9NTG1 2253 aa17.02■□□□□ 0.32
SMG8-203ENST00000578922 CACNA1DQ01668 2161 aa17.02■□□□□ 0.32
SMG8-203ENST00000578922 FBXO24O75426 580 aa17.02■□□□□ 0.32
SMG8-203ENST00000578922 PIGPP57054 158 aa17.02■□□□□ 0.32
SMG8-203ENST00000578922 NCMAPQ5T1S8 102 aa17.02■□□□□ 0.32
SMG8-203ENST00000578922 FOXRED2Q8IWF2 684 aa17.02■□□□□ 0.32
SMG8-203ENST00000578922 ARV1Q9H2C2 271 aa17.02■□□□□ 0.32
SMG8-203ENST00000578922 TMEM231Q9H6L2 316 aa17.02■□□□□ 0.32
SMG8-203ENST00000578922 HES4Q9HCC6 221 aa17.02■□□□□ 0.32
SMG8-203ENST00000578922 TREM2Q9NZC2 230 aa17.02■□□□□ 0.32
SMG8-203ENST00000578922 FBXL17Q9UF56 701 aa17.02■□□□□ 0.32
SMG8-203ENST00000578922 ANKHD1Q8IWZ3 2542 aaKnown RBP17.02■□□□□ 0.32
SMG8-203ENST00000578922 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.02■□□□□ 0.31
SMG8-203ENST00000578922 SLC33A1O00400 549 aaPredicted RBP17.02■□□□□ 0.31
SMG8-203ENST00000578922 SH2D1BO14796 132 aa17.02■□□□□ 0.31
SMG8-203ENST00000578922 HAND1O96004 215 aa17.02■□□□□ 0.31
SMG8-203ENST00000578922 IGHV1-46P01743 117 aa17.02■□□□□ 0.31
SMG8-203ENST00000578922 PMELP40967 661 aa17.02■□□□□ 0.31
SMG8-203ENST00000578922 TMEM33P57088 247 aa17.02■□□□□ 0.31
SMG8-203ENST00000578922 CBLN2Q8IUK8 224 aa17.02■□□□□ 0.31
SMG8-203ENST00000578922 ZCCHC24Q8N2G6 241 aaKnown RBP17.02■□□□□ 0.31
SMG8-203ENST00000578922 COMMD1Q8N668 190 aa17.02■□□□□ 0.31
SMG8-203ENST00000578922 PTBP3O95758 552 aaKnown RBP17.01■□□□□ 0.31
SMG8-203ENST00000578922 EGR1P18146 543 aa17.01■□□□□ 0.31
SMG8-203ENST00000578922 RCC1P18754 421 aaPredicted RBP17.01■□□□□ 0.31
SMG8-203ENST00000578922 NPBWR1P48145 328 aa17.01■□□□□ 0.31
SMG8-203ENST00000578922 DVL1P1P54792 670 aaPredicted RBP17.01■□□□□ 0.31
SMG8-203ENST00000578922 UCP3P55916 312 aa17.01■□□□□ 0.31
SMG8-203ENST00000578922 TMEM187Q14656 261 aa17.01■□□□□ 0.31
SMG8-203ENST00000578922 ZNF146Q15072 292 aa17.01■□□□□ 0.31
SMG8-203ENST00000578922 ABCA11PQ4W5N1 156 aa17.01■□□□□ 0.31
SMG8-203ENST00000578922 ACP7Q6ZNF0 438 aa17.01■□□□□ 0.31
SMG8-203ENST00000578922 C20orf204Q6ZNR8 217 aa17.01■□□□□ 0.31
SMG8-203ENST00000578922 DMRTC2Q8IXT2 367 aaPredicted RBP17.01■□□□□ 0.31
SMG8-203ENST00000578922 TRAV39A0A0B4J263 110 aa17.01■□□□□ 0.31
SMG8-203ENST00000578922 SHISA9B4DS77 424 aa17.01■□□□□ 0.31
SMG8-203ENST00000578922 NAPSAO96009 420 aa17.01■□□□□ 0.31
SMG8-203ENST00000578922 HMGN3Q15651 99 aa17.01■□□□□ 0.31
SMG8-203ENST00000578922 GPR157Q5UAW9 335 aa17.01■□□□□ 0.31
SMG8-203ENST00000578922 FIP1L1Q6UN15 594 aaKnown RBP17.01■□□□□ 0.31
SMG8-203ENST00000578922 LIME1Q9H400 295 aa17.01■□□□□ 0.31
SMG8-203ENST00000578922 FAM212BQ9NTI7 297 aaPredicted RBP17.01■□□□□ 0.31
SMG8-203ENST00000578922 FAM96BQ9Y3D0 163 aa17.01■□□□□ 0.31
SMG8-203ENST00000578922 H7C1Q1 480 aa17■□□□□ 0.31
SMG8-203ENST00000578922 PLAUP00749 431 aa17■□□□□ 0.31
SMG8-203ENST00000578922 ACAA1P09110 424 aaPredicted RBP17■□□□□ 0.31
SMG8-203ENST00000578922 HOXA1P49639 335 aaPredicted RBP17■□□□□ 0.31
SMG8-203ENST00000578922 TNFAIP6P98066 277 aaPredicted RBP17■□□□□ 0.31
SMG8-203ENST00000578922 SWI5Q1ZZU3 235 aa17■□□□□ 0.31
SMG8-203ENST00000578922 IGSF11Q5DX21 431 aa17■□□□□ 0.31
SMG8-203ENST00000578922 SPIN3Q5JUX0 258 aa17■□□□□ 0.31
SMG8-203ENST00000578922 RTN4IP1Q8WWV3 396 aaPredicted RBP17■□□□□ 0.31
SMG8-203ENST00000578922 SAV1Q9H4B6 383 aaPredicted RBP17■□□□□ 0.31
SMG8-203ENST00000578922 Q9N2K0 584 aa17■□□□□ 0.31
SMG8-203ENST00000578922 LSM5Q9Y4Y9 91 aaKnown RBP17■□□□□ 0.31
SMG8-203ENST00000578922 SPTBN1Q01082 2364 aaKnown RBP17■□□□□ 0.31
SMG8-203ENST00000578922 SFTA3P0C7M3 94 aa16.99■□□□□ 0.31
SMG8-203ENST00000578922 PLPPR1Q8TBJ4 325 aa16.99■□□□□ 0.31
SMG8-203ENST00000578922 MRPL30Q8TCC3 161 aaKnown RBP16.99■□□□□ 0.31
SMG8-203ENST00000578922 IFT22Q9H7X7 185 aa16.99■□□□□ 0.31
SMG8-203ENST00000578922 BORCS7-ASMTA0A0B4J1R7 106 aa16.99■□□□□ 0.31
SMG8-203ENST00000578922 E7EQL1 145 aa16.99■□□□□ 0.31
SMG8-203ENST00000578922 PSPNO60542 156 aa16.99■□□□□ 0.31
SMG8-203ENST00000578922 CD3EP07766 207 aa16.99■□□□□ 0.31
SMG8-203ENST00000578922 SEC11BP0C7V7 166 aa16.99■□□□□ 0.31
SMG8-203ENST00000578922 TLE1Q04724 770 aa16.99■□□□□ 0.31
SMG8-203ENST00000578922 LIAT1Q6ZQX7 453 aa16.99■□□□□ 0.31
SMG8-203ENST00000578922 IGHV3OR15-7A0A075B7D8 119 aa16.98■□□□□ 0.31
SMG8-203ENST00000578922 ZG16O60844 167 aa16.98■□□□□ 0.31
SMG8-203ENST00000578922 MBPP02686 304 aaPredicted RBP16.98■□□□□ 0.31
SMG8-203ENST00000578922 SCTP09683 121 aa16.98■□□□□ 0.31
SMG8-203ENST00000578922 PAX6P26367 422 aa16.98■□□□□ 0.31
SMG8-203ENST00000578922 RAB13P51153 203 aa16.98■□□□□ 0.31
SMG8-203ENST00000578922 CCL8P80075 99 aa16.98■□□□□ 0.31
SMG8-203ENST00000578922 SMIM21Q3B7S5 101 aa16.98■□□□□ 0.31
SMG8-203ENST00000578922 Q6ZRG5 221 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms