RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 ZNF546Q86UE3 836 aa24.27■■□□□ 1.48
CTDNEP1-208ENST00000573600 TGIF2LYQ8IUE0 185 aa24.27■■□□□ 1.48
CTDNEP1-208ENST00000573600 ITLN2Q8WWU7 325 aaPredicted RBP24.27■■□□□ 1.48
CTDNEP1-208ENST00000573600 TMEM106BQ9NUM4 274 aa24.27■■□□□ 1.48
CTDNEP1-208ENST00000573600 OR6C3Q9NZP0 311 aa24.27■■□□□ 1.48
CTDNEP1-208ENST00000573600 UBE2J1Q9Y385 318 aaPredicted RBP24.27■■□□□ 1.48
CTDNEP1-208ENST00000573600 DSCAMO60469 2012 aa24.26■■□□□ 1.47
CTDNEP1-208ENST00000573600 RAI1Q7Z5J4 1906 aaPredicted RBP24.26■■□□□ 1.47
CTDNEP1-208ENST00000573600 NKX6-3A6NJ46 265 aa24.26■■□□□ 1.47
CTDNEP1-208ENST00000573600 MPTX1A8MV57 137 aa24.26■■□□□ 1.47
CTDNEP1-208ENST00000573600 PGLYRP1O75594 196 aaPredicted RBP24.26■■□□□ 1.47
CTDNEP1-208ENST00000573600 WNT2P09544 360 aa24.26■■□□□ 1.47
CTDNEP1-208ENST00000573600 DCAF16Q9NXF7 216 aa24.26■■□□□ 1.47
CTDNEP1-208ENST00000573600 TANC2Q9HCD6 1990 aa24.25■■□□□ 1.47
CTDNEP1-208ENST00000573600 PPIAL4EA0A075B759 164 aa24.25■■□□□ 1.47
CTDNEP1-208ENST00000573600 PPIAL4DF5H284 164 aa24.25■■□□□ 1.47
CTDNEP1-208ENST00000573600 C15orf65H3BRN8 121 aa24.25■■□□□ 1.47
CTDNEP1-208ENST00000573600 ZG16O60844 167 aa24.25■■□□□ 1.47
CTDNEP1-208ENST00000573600 GYPAP02724 150 aa24.25■■□□□ 1.47
CTDNEP1-208ENST00000573600 PPIAL4FP0DN26 164 aa24.25■■□□□ 1.47
CTDNEP1-208ENST00000573600 SSTR5P35346 364 aa24.25■■□□□ 1.47
CTDNEP1-208ENST00000573600 EDDM3BP56851 147 aa24.25■■□□□ 1.47
CTDNEP1-208ENST00000573600 C14orf79Q96F83 325 aa24.25■■□□□ 1.47
CTDNEP1-208ENST00000573600 TMEM56Q96MV1 263 aa24.25■■□□□ 1.47
CTDNEP1-208ENST00000573600 RAB9BQ9NP90 201 aa24.25■■□□□ 1.47
CTDNEP1-208ENST00000573600 PPIAL4AQ9Y536 164 aa24.25■■□□□ 1.47
CTDNEP1-208ENST00000573600 TMEM56-RWDD3S4R434 201 aa24.25■■□□□ 1.47
CTDNEP1-208ENST00000573600 TPRP12270 2363 aaKnown RBP24.24■■□□□ 1.47
CTDNEP1-208ENST00000573600 SIGLEC5O15389 551 aa24.24■■□□□ 1.47
CTDNEP1-208ENST00000573600 OR52L2PQ8NGH6 319 aa24.24■■□□□ 1.47
CTDNEP1-208ENST00000573600 CCL13Q99616 98 aa24.24■■□□□ 1.47
CTDNEP1-208ENST00000573600 MFFQ9GZY8 342 aa24.24■■□□□ 1.47
CTDNEP1-208ENST00000573600 TMED3Q9Y3Q3 217 aa24.24■■□□□ 1.47
CTDNEP1-208ENST00000573600 PIGBOS1A0A0B4J2F0 54 aa24.24■■□□□ 1.47
CTDNEP1-208ENST00000573600 H0Y980 276 aa24.24■■□□□ 1.47
CTDNEP1-208ENST00000573600 OR8U9P0C7N5 309 aa24.24■■□□□ 1.47
CTDNEP1-208ENST00000573600 IL15RAQ13261 267 aa24.24■■□□□ 1.47
CTDNEP1-208ENST00000573600 OPCMLQ14982 345 aa24.24■■□□□ 1.47
CTDNEP1-208ENST00000573600 IAH1Q2TAA2 248 aaPredicted RBP24.24■■□□□ 1.47
CTDNEP1-208ENST00000573600 OR8U1Q8NH10 309 aa24.24■■□□□ 1.47
CTDNEP1-208ENST00000573600 CCL17Q92583 94 aa24.24■■□□□ 1.47
CTDNEP1-208ENST00000573600 OR2S2Q9NQN1 319 aa24.24■■□□□ 1.47
CTDNEP1-208ENST00000573600 F2RP25116 425 aa24.23■■□□□ 1.47
CTDNEP1-208ENST00000573600 UCP1P25874 307 aa24.23■■□□□ 1.47
CTDNEP1-208ENST00000573600 S100A11P31949 105 aa24.23■■□□□ 1.47
CTDNEP1-208ENST00000573600 ZBTB34Q8NCN2 500 aa24.23■■□□□ 1.47
CTDNEP1-208ENST00000573600 DCTN5Q9BTE1 182 aa24.23■■□□□ 1.47
CTDNEP1-208ENST00000573600 TNFSF18Q9UNG2 199 aa24.23■■□□□ 1.47
CTDNEP1-208ENST00000573600 DUXBA0A1W2PPF3 345 aa24.22■■□□□ 1.47
CTDNEP1-208ENST00000573600 PET100P0DJ07 73 aa24.22■■□□□ 1.47
CTDNEP1-208ENST00000573600 MEX3BQ6ZN04 569 aaKnown RBP24.22■■□□□ 1.47
CTDNEP1-208ENST00000573600 TMUB2Q71RG4 321 aa24.22■■□□□ 1.47
CTDNEP1-208ENST00000573600 ZNF767PQ75MW2 155 aa24.22■■□□□ 1.47
CTDNEP1-208ENST00000573600 LYZL2Q7Z4W2 148 aa24.22■■□□□ 1.47
CTDNEP1-208ENST00000573600 HEXA-AS1Q9H8Q6 139 aa24.22■■□□□ 1.47
CTDNEP1-208ENST00000573600 GSKIPQ9P0R6 139 aa24.22■■□□□ 1.47
CTDNEP1-208ENST00000573600 KCNS2Q9ULS6 477 aa24.22■■□□□ 1.47
CTDNEP1-208ENST00000573600 NBASA2RRP1 2371 aa24.22■■□□□ 1.47
CTDNEP1-208ENST00000573600 IGLV2-14P01704 120 aa24.21■■□□□ 1.47
CTDNEP1-208ENST00000573600 PPOXP50336 477 aa24.21■■□□□ 1.47
CTDNEP1-208ENST00000573600 MSMO1Q15800 293 aa24.21■■□□□ 1.47
CTDNEP1-208ENST00000573600 ZNF695Q8IW36 515 aa24.21■■□□□ 1.47
CTDNEP1-208ENST00000573600 LHFPL5Q8TAF8 219 aa24.21■■□□□ 1.47
CTDNEP1-208ENST00000573600 FAM216AQ8WUB2 273 aa24.21■■□□□ 1.47
CTDNEP1-208ENST00000573600 PARP12Q9H0J9 701 aaKnown RBP24.21■■□□□ 1.47
CTDNEP1-208ENST00000573600 ARFGEF3Q5TH69 2177 aa24.21■■□□□ 1.47
CTDNEP1-208ENST00000573600 A0A0D9SG52 128 aa24.21■■□□□ 1.47
CTDNEP1-208ENST00000573600 IGHV1-69-2A0A0G2JMI3 117 aa24.21■■□□□ 1.47
CTDNEP1-208ENST00000573600 TNFSF12O43508 249 aa24.21■■□□□ 1.47
CTDNEP1-208ENST00000573600 CDS2O95674 445 aa24.21■■□□□ 1.47
CTDNEP1-208ENST00000573600 SELLP14151 372 aa24.21■■□□□ 1.47
CTDNEP1-208ENST00000573600 ZNF345Q14585 488 aa24.21■■□□□ 1.47
CTDNEP1-208ENST00000573600 TMEM268Q5VZI3 342 aa24.21■■□□□ 1.47
CTDNEP1-208ENST00000573600 ZNF645Q8N7E2 425 aa24.21■■□□□ 1.47
CTDNEP1-208ENST00000573600 IL22RA2Q969J5 263 aa24.21■■□□□ 1.47
CTDNEP1-208ENST00000573600 MBD2Q9UBB5 411 aa24.21■■□□□ 1.47
CTDNEP1-208ENST00000573600 JPT1Q9UK76 154 aa24.21■■□□□ 1.47
CTDNEP1-208ENST00000573600 OR2F2O95006 317 aa24.2■■□□□ 1.46
CTDNEP1-208ENST00000573600 OR2F1Q13607 317 aa24.2■■□□□ 1.46
CTDNEP1-208ENST00000573600 GNMTQ14749 295 aa24.2■■□□□ 1.46
CTDNEP1-208ENST00000573600 ESCO2Q56NI9 601 aa24.2■■□□□ 1.46
CTDNEP1-208ENST00000573600 FAM216BQ8N7L0 139 aa24.2■■□□□ 1.46
CTDNEP1-208ENST00000573600 RFESDQ8TAC1 157 aa24.2■■□□□ 1.46
CTDNEP1-208ENST00000573600 ARL6Q9H0F7 186 aa24.2■■□□□ 1.46
CTDNEP1-208ENST00000573600 A0A1B0GW55 424 aa24.19■■□□□ 1.46
CTDNEP1-208ENST00000573600 F2RL2O00254 374 aa24.19■■□□□ 1.46
CTDNEP1-208ENST00000573600 DUX4L2P0CJ85 424 aa24.19■■□□□ 1.46
CTDNEP1-208ENST00000573600 DUX4L3P0CJ86 424 aa24.19■■□□□ 1.46
CTDNEP1-208ENST00000573600 DUX4L4P0CJ87 422 aa24.19■■□□□ 1.46
CTDNEP1-208ENST00000573600 DUX4L5P0CJ88 424 aa24.19■■□□□ 1.46
CTDNEP1-208ENST00000573600 DUX4L6P0CJ89 424 aa24.19■■□□□ 1.46
CTDNEP1-208ENST00000573600 DUX4L7P0CJ90 424 aa24.19■■□□□ 1.46
CTDNEP1-208ENST00000573600 PRSS54Q6PEW0 395 aa24.19■■□□□ 1.46
CTDNEP1-208ENST00000573600 DUX4L9Q6RFH8 374 aaPredicted RBP24.19■■□□□ 1.46
CTDNEP1-208ENST00000573600 SELENOHQ8IZQ5 122 aaKnown RBP24.19■■□□□ 1.46
CTDNEP1-208ENST00000573600 SLC35G3Q8N808 338 aa24.19■■□□□ 1.46
CTDNEP1-208ENST00000573600 OR8H1Q8NGG4 311 aa24.19■■□□□ 1.46
CTDNEP1-208ENST00000573600 DUX4Q9UBX2 424 aa24.19■■□□□ 1.46
CTDNEP1-208ENST00000573600 ANKHD1Q8IWZ3 2542 aaKnown RBP24.18■■□□□ 1.46
CTDNEP1-208ENST00000573600 TRGV10A0A0A0MS01 117 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms