RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 B9D1Q9UPM9 204 aa3.45□□□□□ -1.86
LINC00561-201ENST00000565815 HEATR5BQ9P2D3 2071 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 MFNGO00587 321 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 SMPD2O60906 423 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 AKR7A3O95154 331 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 CT45A8P0DMV1 189 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 CT45A9P0DMV2 189 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 RAB5CP51148 216 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 DAP3P51398 398 aaKnown RBP3.44□□□□□ -1.86
LINC00561-201ENST00000565815 CAV2P51636 162 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 TAS2R46P59540 309 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 TMEM128Q5BJH2 165 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 CT45A2Q5DJT8 189 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 ADAMTSL4-AS1Q5T5F5 129 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 FAAP20Q6NZ36 180 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 NPSR1Q6W5P4 371 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 HOGA1Q86XE5 327 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 ANGPTL5Q86XS5 388 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 C10orf53Q8N6V4 93 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 ZNF615Q8N8J6 731 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 OR51L1Q8NGJ5 315 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 PSMF1Q92530 271 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 RNASE6Q93091 150 aaKnown RBP3.44□□□□□ -1.86
LINC00561-201ENST00000565815 C8orf44Q96CB5 159 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 ARL5BQ96KC2 179 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 SIGLEC12Q96PQ1 595 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 SAV1Q9H4B6 383 aaPredicted RBP3.44□□□□□ -1.86
LINC00561-201ENST00000565815 FANCFQ9NPI8 374 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 PARP11Q9NR21 331 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 CUTCQ9NTM9 273 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 MYEF2Q9P2K5 600 aaKnown RBP3.44□□□□□ -1.86
LINC00561-201ENST00000565815 CTSFQ9UBX1 484 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 KLHDC2Q9Y2U9 406 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 IGHV1-45A0A0A0MS14 117 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 IGLV1-36A0A0B4J1U3 117 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 FAM74A7A6NL05 159 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 A8MVM7 634 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 NPIPA5E9PKD4 350 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 SLC33A1O00400 549 aaPredicted RBP3.44□□□□□ -1.86
LINC00561-201ENST00000565815 SRSF10O75494 262 aaKnown RBP3.44□□□□□ -1.86
LINC00561-201ENST00000565815 CDK2AP2O75956 126 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 STATHP02808 62 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 COX6A1P12074 109 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 RPL35AP18077 110 aaKnown RBP3.44□□□□□ -1.86
LINC00561-201ENST00000565815 CXCR1P25024 350 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 SFTPDP35247 375 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 POLR2HP52434 150 aaKnown RBP3.44□□□□□ -1.86
LINC00561-201ENST00000565815 PEA15Q15121 130 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 FAM74A3Q4VXF1 159 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 DNLZQ5SXM8 178 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 GLYATL3Q5SZD4 288 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 OPN5Q6U736 354 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 DPY19L4Q7Z388 723 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 TMED4Q7Z7H5 227 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 PUSL1Q8N0Z8 303 aaKnown RBP3.44□□□□□ -1.86
LINC00561-201ENST00000565815 OR4D10Q8NGI6 311 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 OR1S2Q8NGQ3 325 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 ZPLD1Q8TCW7 415 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 ZNRF4Q8WWF5 429 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 SLC25A44Q96H78 314 aaPredicted RBP3.44□□□□□ -1.86
LINC00561-201ENST00000565815 C2orf50Q96LR7 162 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 C12orf57Q99622 126 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 NRTNQ99748 197 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 ZNF251Q9BRH9 671 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 TTTY10Q9BZA0 68 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 SYT4Q9H2B2 425 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 ZNF160Q9HCG1 818 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 UQCC1Q9NVA1 299 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 ZNF346Q9UL40 294 aaKnown RBP3.44□□□□□ -1.86
LINC00561-201ENST00000565815 NPIPA1Q9UND3 350 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 VSIG4Q9Y279 399 aa3.44□□□□□ -1.86
LINC00561-201ENST00000565815 PIGBOS1A0A0B4J2F0 54 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 A0A1B0GW64 132 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 OOEPA6NGQ2 149 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 C1orf196B1AJZ1 125 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 UTS2O95399 124 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 SFT2D2O95562 160 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 CST4P01036 141 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 HEXBP07686 556 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 NR2C1P13056 603 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 ZNF823P16415 610 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 NPBWR1P48145 328 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 SULT1A2P50226 295 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 EFNB2P52799 333 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 SUCLG1P53597 346 aaKnown RBP3.43□□□□□ -1.86
LINC00561-201ENST00000565815 CLDN17P56750 224 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 PPP1R1AQ13522 171 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 ATRAIDQ6UW56 229 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 GRINAQ7Z429 371 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 TRAPPC6BQ86SZ2 158 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 NAA40Q86UY6 237 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 ZNF561Q8N587 486 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 RELL2Q8NC24 303 aaPredicted RBP3.43□□□□□ -1.86
LINC00561-201ENST00000565815 LFNGQ8NES3 379 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 OR8G5Q8NG78 346 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 TERB2Q8NHR7 220 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 ZNF563Q8TA94 476 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 KCNG3Q8TAE7 436 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 NUBPLQ8TB37 319 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 TMEM234Q8WY98 164 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms