RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 SLC17A2O00624 439 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 PDCD5O14737 125 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 LANCL1O43813 399 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 YPEL1O60688 119 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 MOSP00540 346 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 HSMCR30P0CW71 290 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 VSIG8P0DPA2 414 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 ARSBP15848 533 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 JUNBP17275 347 aaPredicted RBP13.32□□□□□ -0.28
USB1-211ENST00000565662 GALP22466 123 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 CD24P25063 80 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 CHATP28329 748 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 GABARAPL2P60520 117 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 C9orf152Q5JTZ5 239 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 SLC35E3Q7Z769 313 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 SVOPQ8N4V2 548 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 OR4K15Q8NH41 348 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 NRG4Q8WWG1 115 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 LEAP2Q969E1 77 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 ST6GALNAC6Q969X2 333 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 FAM46BQ96A09 425 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 YPEL2Q96QA6 119 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 MGLLQ99685 303 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 CHCHD6Q9BRQ6 235 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 ABHD14AQ9BUJ0 271 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 OR2S2Q9NQN1 319 aa13.32□□□□□ -0.28
USB1-211ENST00000565662 TCRBV4S1A1TA0A5B7 111 aa13.31□□□□□ -0.28
USB1-211ENST00000565662 TMEM14DPA8MWL7 114 aa13.31□□□□□ -0.28
USB1-211ENST00000565662 AP4M1O00189 453 aa13.31□□□□□ -0.28
USB1-211ENST00000565662 IGHG2P01859 326 aa13.31□□□□□ -0.28
USB1-211ENST00000565662 PF4P02776 101 aa13.31□□□□□ -0.28
USB1-211ENST00000565662 OR5H8P0DN80 308 aa13.31□□□□□ -0.28
USB1-211ENST00000565662 NKAPLQ5M9Q1 402 aa13.31□□□□□ -0.28
USB1-211ENST00000565662 KPRPQ5T749 579 aaPredicted RBP13.31□□□□□ -0.28
USB1-211ENST00000565662 PRR18Q8N4B5 295 aa13.31□□□□□ -0.28
USB1-211ENST00000565662 ZFP57Q9NU63 452 aa13.31□□□□□ -0.28
USB1-211ENST00000565662 PLEKHJ1Q9NW61 149 aa13.31□□□□□ -0.28
USB1-211ENST00000565662 ZNF580Q9UK33 172 aa13.31□□□□□ -0.28
USB1-211ENST00000565662 HSF4Q9ULV5 492 aa13.31□□□□□ -0.28
USB1-211ENST00000565662 TRBV6-6A0A0A6YYG2 114 aa13.3□□□□□ -0.28
USB1-211ENST00000565662 UBE2QL1A1L167 161 aa13.3□□□□□ -0.28
USB1-211ENST00000565662 SERPINE3A8MV23 424 aa13.3□□□□□ -0.28
USB1-211ENST00000565662 ITGB1BP1O14713 200 aa13.3□□□□□ -0.28
USB1-211ENST00000565662 IGHV3-7P01780 117 aa13.3□□□□□ -0.28
USB1-211ENST00000565662 AMY1AP04745 511 aa13.3□□□□□ -0.28
USB1-211ENST00000565662 AMY2AP04746 511 aa13.3□□□□□ -0.28
USB1-211ENST00000565662 RAB11BQ15907 218 aa13.3□□□□□ -0.28
USB1-211ENST00000565662 SAMD5Q5TGI4 173 aa13.3□□□□□ -0.28
USB1-211ENST00000565662 SIGIRRQ6IA17 410 aa13.3□□□□□ -0.28
USB1-211ENST00000565662 ZNF439Q8NDP4 499 aa13.3□□□□□ -0.28
USB1-211ENST00000565662 OR2AK2Q8NG84 335 aa13.3□□□□□ -0.28
USB1-211ENST00000565662 MRPL30Q8TCC3 161 aaKnown RBP13.3□□□□□ -0.28
USB1-211ENST00000565662 EDARADDQ8WWZ3 215 aa13.3□□□□□ -0.28
USB1-211ENST00000565662 CHMP1AQ9HD42 196 aaPredicted RBP13.3□□□□□ -0.28
USB1-211ENST00000565662 ZNF581Q9P0T4 197 aa13.3□□□□□ -0.28
USB1-211ENST00000565662 PIPOXQ9P0Z9 390 aa13.3□□□□□ -0.28
USB1-211ENST00000565662 ZMAT5Q9UDW3 170 aaKnown RBP13.3□□□□□ -0.28
USB1-211ENST00000565662 VWFP04275 2813 aa13.3□□□□□ -0.28
USB1-211ENST00000565662 PLXNB1O43157 2135 aa13.3□□□□□ -0.28
USB1-211ENST00000565662 TRAV39A0A0B4J263 110 aa13.29□□□□□ -0.28
USB1-211ENST00000565662 RCC1P18754 421 aaPredicted RBP13.29□□□□□ -0.28
USB1-211ENST00000565662 CD33P20138 364 aa13.29□□□□□ -0.28
USB1-211ENST00000565662 MYL9P24844 172 aa13.29□□□□□ -0.28
USB1-211ENST00000565662 BLVRBP30043 206 aaPredicted RBP13.29□□□□□ -0.28
USB1-211ENST00000565662 VHLP40337 213 aa13.29□□□□□ -0.28
USB1-211ENST00000565662 MRPS15P82914 257 aaKnown RBP13.29□□□□□ -0.28
USB1-211ENST00000565662 ARL6IP1Q15041 203 aa13.29□□□□□ -0.28
USB1-211ENST00000565662 HMGN3Q15651 99 aa13.29□□□□□ -0.28
USB1-211ENST00000565662 TMEM95Q3KNT9 176 aa13.29□□□□□ -0.28
USB1-211ENST00000565662 MORN2Q502X0 79 aa13.29□□□□□ -0.28
USB1-211ENST00000565662 OR56B1Q8NGI3 324 aa13.29□□□□□ -0.28
USB1-211ENST00000565662 FCGR1BQ92637 280 aa13.29□□□□□ -0.28
USB1-211ENST00000565662 RCC1LQ96I51 464 aaKnown RBP13.29□□□□□ -0.28
USB1-211ENST00000565662 EAF1Q96JC9 268 aaPredicted RBP13.29□□□□□ -0.28
USB1-211ENST00000565662 RASL11BQ9BPW5 248 aa13.29□□□□□ -0.28
USB1-211ENST00000565662 ABCG5Q9H222 651 aa13.29□□□□□ -0.28
USB1-211ENST00000565662 IGHV3-43A0A0B4J1X8 118 aa13.28□□□□□ -0.28
USB1-211ENST00000565662 NCBP2LA6PVI3 153 aaKnown RBP13.28□□□□□ -0.28
USB1-211ENST00000565662 NAPSAO96009 420 aa13.28□□□□□ -0.28
USB1-211ENST00000565662 IGHV3-43DP0DP04 118 aa13.28□□□□□ -0.28
USB1-211ENST00000565662 CALRP27797 417 aaKnown RBP13.28□□□□□ -0.28
USB1-211ENST00000565662 P2RY14Q15391 338 aa13.28□□□□□ -0.28
USB1-211ENST00000565662 KHDC1LQ5JSQ8 128 aa13.28□□□□□ -0.28
USB1-211ENST00000565662 FAM27D1Q5T7N8 215 aa13.28□□□□□ -0.28
USB1-211ENST00000565662 Q6ZS46 218 aa13.28□□□□□ -0.28
USB1-211ENST00000565662 LYG1Q8N1E2 194 aa13.28□□□□□ -0.28
USB1-211ENST00000565662 Q8N6K4 173 aa13.28□□□□□ -0.28
USB1-211ENST00000565662 TMEM203Q969S6 136 aa13.28□□□□□ -0.28
USB1-211ENST00000565662 CNBD2Q96M20 576 aa13.28□□□□□ -0.28
USB1-211ENST00000565662 S1PR3Q99500 378 aa13.28□□□□□ -0.28
USB1-211ENST00000565662 YTHDF1Q9BYJ9 559 aaKnown RBP13.28□□□□□ -0.28
USB1-211ENST00000565662 C12orf4Q9NQ89 552 aa13.28□□□□□ -0.28
USB1-211ENST00000565662 V9GY05 133 aa13.28□□□□□ -0.28
USB1-211ENST00000565662 TRAV1-2A0A0B4J238 106 aa13.27□□□□□ -0.29
USB1-211ENST00000565662 A0A1W2PPE3 182 aa13.27□□□□□ -0.29
USB1-211ENST00000565662 ADARB2-AS1A8MUL3 147 aa13.27□□□□□ -0.29
USB1-211ENST00000565662 DIRAS3O95661 229 aa13.27□□□□□ -0.29
USB1-211ENST00000565662 GP2P55259 537 aaKnown RBP13.27□□□□□ -0.29
USB1-211ENST00000565662 QRFPP83859 136 aa13.27□□□□□ -0.29
USB1-211ENST00000565662 UNC119Q13432 240 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms