RNA–Protein interactions for RNA: ENST00000556839.5

RALGAPA1-215, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 3

Gene RALGAPA1, Length 1,305 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-215	ENST00000556839	HPDL	Q96IR7	371 aa		4.38	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	CIB3	Q96Q77	187 aa	Predicted RBP	4.38	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	TRIB3	Q96RU7	358 aa		4.38	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	TMEM133	Q9H2Q1	129 aa		4.38	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	IFI27L2	Q9H2X8	130 aa		4.38	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	MAP1LC3A	Q9H492	121 aa		4.38	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	RPS6KB2	Q9UBS0	482 aa		4.38	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	RPL36	Q9Y3U8	105 aa	Known RBP	4.38	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	MAST2	Q6P0Q8	1798 aa		4.38	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	MYH14	Q7Z406	1995 aa	Known RBP	4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	ROBO1	Q9Y6N7	1651 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	PLXND1	Q9Y4D7	1925 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839		A0A0A6YYD5	115 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	TRBV9	A0A0B4J1U6	114 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	ZNF816-ZNF321P	A0A0X1KG74	233 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	LOC100130705	A0A1B0GUX0	176 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839		A0A1B0GVY2	172 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	IDS	B3KWA1	339 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839		J3KT08	172 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	ZNF207	O43670	478 aa	Known RBP	4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	HPN	P05981	417 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	H2AFZ	P0C0S5	128 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	CT62	P0C5K7	136 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	OR4A8	P0C604	315 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	SLC35G6	P0C7Q6	338 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	IGLC1	P0CG04	106 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	FAM157C	P0CG43	387 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	CD34	P28906	385 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	SNCA	P37840	140 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	TSFM	P43897	325 aa	Known RBP	4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	CX3CR1	P49238	355 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	POLR2H	P52434	150 aa	Known RBP	4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	CRIP2	P52943	208 aa	Predicted RBP	4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	PDX1	P52945	283 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	DVL1P1	P54792	670 aa	Predicted RBP	4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	MEF2B	Q02080	365 aa	Predicted RBP	4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	IL17A	Q16552	155 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	RPEL1	Q2QD12	228 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	ARL9	Q6T311	187 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	CD164L2	Q6UWJ8	174 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	APOOL	Q6UXV4	268 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839		Q6ZSR9	355 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	ACOT1	Q86TX2	421 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	FBXO16	Q8IX29	292 aa	Predicted RBP	4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	MMD2	Q8IY49	270 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	ZNF567	Q8N184	647 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	OR5AP2	Q8NGF4	316 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	OR5A1	Q8NGJ0	315 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	OR6T1	Q8NGN1	323 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	OR1J4	Q8NGS1	313 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	OR2G3	Q8NGZ4	309 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	SFXN5	Q8TD22	340 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	BLNK	Q8WV28	456 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	PELI1	Q96FA3	418 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	PEBP4	Q96S96	227 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	TBX15	Q96SF7	602 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	GPER1	Q99527	375 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	NRTN	Q99748	197 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	ADAT1	Q9BUB4	502 aa	Known RBP	4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	PRORY	Q9H606	182 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	PELI2	Q9HAT8	420 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	POPDC3	Q9HBV1	291 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	SLC52A3	Q9NQ40	469 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	TMEM30A	Q9NV96	361 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	ZNF319	Q9P2F9	582 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	UQCR10	Q9UDW1	63 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	CACFD1	Q9UGQ2	172 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	HDGFL3	Q9Y3E1	203 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	ENPP4	Q9Y6X5	453 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	STRCP1	A6NGW2	1772 aa		4.37	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	LAMB1	P07942	1786 aa		4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	DDX60L	Q5H9U9	1706 aa	Known RBP	4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839		A0A087WWC5	75 aa		4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	SPAAR	A0A1B0GVQ0	90 aa		4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	FAM166B	A8MTA8	275 aa		4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	PRR32	B1ATL7	298 aa		4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839		F5H5K5	113 aa		4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839		F8VVB4	439 aa		4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839		F8VWA3	439 aa		4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839		K7EPK0	472 aa		4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	CCL24	O00175	119 aa		4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	OR2A4	O95047	310 aa		4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	SP9	P0CG40	484 aa		4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	LIMS3	P0CW19	117 aa		4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	LIMS4	P0CW20	117 aa		4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	CT45A6	P0DMU7	189 aa		4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	CT45A5	P0DMU8	189 aa		4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	CT45A7	P0DMV0	189 aa		4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	ERG	P11308	486 aa		4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	TCN2	P20062	427 aa		4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	CSRP1	P21291	193 aa	Known RBP	4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	IDS	P22304	550 aa		4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	CD1C	P29017	333 aa		4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	OR1D4	P47884	311 aa		4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	ZNF140	P52738	457 aa	Predicted RBP	4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	B3GALT5-AS1	P59052	145 aa		4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	RPL27	P61353	136 aa	Known RBP	4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	RPS15A	P62244	130 aa	Known RBP	4.36	□□□□□ -1.71
RALGAPA1-215	ENST00000556839	RPS25	P62851	125 aa	Known RBP	4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms