RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 CD200R1Q8TD46 325 aa2.93□□□□□ -1.94
LEMD3-206ENST00000545026 LMX1AQ8TE12 382 aa2.93□□□□□ -1.94
LEMD3-206ENST00000545026 SMIM12Q96EX1 92 aa2.93□□□□□ -1.94
LEMD3-206ENST00000545026 BRD4O60885 1362 aaPredicted RBP2.92□□□□□ -1.94
LEMD3-206ENST00000545026 GOLGA6L10A6NI86 522 aa2.92□□□□□ -1.94
LEMD3-206ENST00000545026 FTCDNL1E5RQL4 147 aa2.92□□□□□ -1.94
LEMD3-206ENST00000545026 H3BSA7 217 aa2.92□□□□□ -1.94
LEMD3-206ENST00000545026 K7EQS6 105 aa2.92□□□□□ -1.94
LEMD3-206ENST00000545026 ADAP1O75689 374 aa2.92□□□□□ -1.94
LEMD3-206ENST00000545026 YEATS4O95619 227 aa2.92□□□□□ -1.94
LEMD3-206ENST00000545026 FBP1P09467 338 aa2.92□□□□□ -1.94
LEMD3-206ENST00000545026 F8A1P23610 371 aa2.92□□□□□ -1.94
LEMD3-206ENST00000545026 COILP38432 576 aaPredicted RBP2.92□□□□□ -1.94
LEMD3-206ENST00000545026 DEFA6Q01524 100 aa2.92□□□□□ -1.94
LEMD3-206ENST00000545026 BSPH1Q075Z2 132 aa2.92□□□□□ -1.94
LEMD3-206ENST00000545026 PDGFRLQ15198 375 aa2.92□□□□□ -1.94
LEMD3-206ENST00000545026 CST6Q15828 149 aa2.92□□□□□ -1.94
LEMD3-206ENST00000545026 TRMT12Q53H54 448 aaKnown RBP2.92□□□□□ -1.94
LEMD3-206ENST00000545026 OTUD6BQ8N6M0 293 aa2.92□□□□□ -1.94
LEMD3-206ENST00000545026 OR10D4PQ8NGN7 298 aa2.92□□□□□ -1.94
LEMD3-206ENST00000545026 C7orf50Q9BRJ6 194 aaKnown RBP2.92□□□□□ -1.94
LEMD3-206ENST00000545026 ZNF426Q9BUY5 554 aa2.92□□□□□ -1.94
LEMD3-206ENST00000545026 CEP170Q5SW79 1584 aa2.91□□□□□ -1.94
LEMD3-206ENST00000545026 F5H5T6 163 aa2.91□□□□□ -1.94
LEMD3-206ENST00000545026 CETN3O15182 167 aa2.91□□□□□ -1.94
LEMD3-206ENST00000545026 OCMP0CE72 109 aaPredicted RBP2.91□□□□□ -1.94
LEMD3-206ENST00000545026 CRABP1P29762 137 aa2.91□□□□□ -1.94
LEMD3-206ENST00000545026 AGTR1P30556 359 aa2.91□□□□□ -1.94
LEMD3-206ENST00000545026 PSMB3P49720 205 aa2.91□□□□□ -1.94
LEMD3-206ENST00000545026 C1DQ13901 141 aaKnown RBP2.91□□□□□ -1.94
LEMD3-206ENST00000545026 C4orf26Q17RF5 130 aa2.91□□□□□ -1.94
LEMD3-206ENST00000545026 LRRC26Q2I0M4 334 aa2.91□□□□□ -1.94
LEMD3-206ENST00000545026 TMPPEQ6ZT21 453 aa2.91□□□□□ -1.94
LEMD3-206ENST00000545026 FUNDC1Q8IVP5 155 aa2.91□□□□□ -1.94
LEMD3-206ENST00000545026 ZFAND2AQ8N6M9 145 aa2.91□□□□□ -1.94
LEMD3-206ENST00000545026 TMEM75Q8N9X5 138 aa2.91□□□□□ -1.94
LEMD3-206ENST00000545026 TNFAIP8L1Q8WVP5 186 aa2.91□□□□□ -1.94
LEMD3-206ENST00000545026 EBNA1BP2Q99848 306 aaKnown RBP2.91□□□□□ -1.94
LEMD3-206ENST00000545026 UBQLN4Q9NRR5 601 aa2.91□□□□□ -1.94
LEMD3-206ENST00000545026 LINC00527Q9UJ94 153 aa2.91□□□□□ -1.94
LEMD3-206ENST00000545026 VPREB3Q9UKI3 123 aa2.91□□□□□ -1.94
LEMD3-206ENST00000545026 CRB1P82279 1406 aa2.91□□□□□ -1.94
LEMD3-206ENST00000545026 PLXNB1O43157 2135 aa2.9□□□□□ -1.94
LEMD3-206ENST00000545026 ATP6V1G2O95670 118 aa2.9□□□□□ -1.95
LEMD3-206ENST00000545026 CTSGP08311 255 aa2.9□□□□□ -1.95
LEMD3-206ENST00000545026 CLDN12P56749 244 aa2.9□□□□□ -1.95
LEMD3-206ENST00000545026 CLEC12BQ2HXU8 276 aa2.9□□□□□ -1.95
LEMD3-206ENST00000545026 TBC1D28Q2M2D7 210 aa2.9□□□□□ -1.95
LEMD3-206ENST00000545026 TCF24Q7RTU0 167 aa2.9□□□□□ -1.95
LEMD3-206ENST00000545026 MSRB3Q8IXL7 192 aa2.9□□□□□ -1.95
LEMD3-206ENST00000545026 RBP7Q96R05 134 aa2.9□□□□□ -1.95
LEMD3-206ENST00000545026 TMEM208Q9BTX3 173 aa2.9□□□□□ -1.95
LEMD3-206ENST00000545026 METTL9Q9H1A3 318 aa2.9□□□□□ -1.95
LEMD3-206ENST00000545026 IMP3Q9NV31 184 aaKnown RBP2.9□□□□□ -1.95
LEMD3-206ENST00000545026 WASHC3Q9Y3C0 194 aa2.9□□□□□ -1.95
LEMD3-206ENST00000545026 DAPL1A0PJW8 107 aa2.89□□□□□ -1.95
LEMD3-206ENST00000545026 SDHAF1A6NFY7 115 aa2.89□□□□□ -1.95
LEMD3-206ENST00000545026 ITGB1BP1O14713 200 aa2.89□□□□□ -1.95
LEMD3-206ENST00000545026 MAPK14Q16539 360 aa2.89□□□□□ -1.95
LEMD3-206ENST00000545026 SDHAF4Q5VUM1 108 aa2.89□□□□□ -1.95
LEMD3-206ENST00000545026 SPATA31B1PQ5VZV4 182 aa2.89□□□□□ -1.95
LEMD3-206ENST00000545026 RIBC1Q8N443 379 aaPredicted RBP2.89□□□□□ -1.95
LEMD3-206ENST00000545026 OR10P1Q8NGE3 313 aa2.89□□□□□ -1.95
LEMD3-206ENST00000545026 MRPL16Q9NX20 251 aaKnown RBP2.89□□□□□ -1.95
LEMD3-206ENST00000545026 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.89□□□□□ -1.95
LEMD3-206ENST00000545026 MYO5BQ9ULV0 1848 aa2.89□□□□□ -1.95
LEMD3-206ENST00000545026 IGSF23A1L1A6 192 aa2.88□□□□□ -1.95
LEMD3-206ENST00000545026 KLRC4-KLRK1H3BQV0 150 aa2.88□□□□□ -1.95
LEMD3-206ENST00000545026 CCRL2O00421 344 aa2.88□□□□□ -1.95
LEMD3-206ENST00000545026 ARL6IP5O75915 188 aa2.88□□□□□ -1.95
LEMD3-206ENST00000545026 ORM2P19652 201 aa2.88□□□□□ -1.95
LEMD3-206ENST00000545026 GZMMP51124 257 aa2.88□□□□□ -1.95
LEMD3-206ENST00000545026 MAP3K7CLP57077 242 aa2.88□□□□□ -1.95
LEMD3-206ENST00000545026 HLA-DRB5Q30154 266 aa2.88□□□□□ -1.95
LEMD3-206ENST00000545026 PLEKHG7Q6ZR37 379 aa2.88□□□□□ -1.95
LEMD3-206ENST00000545026 Q6ZRU5 148 aa2.88□□□□□ -1.95
LEMD3-206ENST00000545026 MFSD8Q8NHS3 518 aa2.88□□□□□ -1.95
LEMD3-206ENST00000545026 PPCDCQ96CD2 204 aa2.88□□□□□ -1.95
LEMD3-206ENST00000545026 LLPHQ9BRT6 129 aaKnown RBP2.88□□□□□ -1.95
LEMD3-206ENST00000545026 DCUN1D5Q9BTE7 237 aa2.88□□□□□ -1.95
LEMD3-206ENST00000545026 GLS2Q9UI32 602 aa2.88□□□□□ -1.95
LEMD3-206ENST00000545026 TP53TG1Q9Y2A0 90 aa2.88□□□□□ -1.95
LEMD3-206ENST00000545026 METTL15A6NJ78 407 aa2.87□□□□□ -1.95
LEMD3-206ENST00000545026 A8MWP6 167 aa2.87□□□□□ -1.95
LEMD3-206ENST00000545026 G3V3Q6 166 aa2.87□□□□□ -1.95
LEMD3-206ENST00000545026 ATP8B1O43520 1251 aa2.87□□□□□ -1.95
LEMD3-206ENST00000545026 CD40LGP29965 261 aa2.87□□□□□ -1.95
LEMD3-206ENST00000545026 PDK2Q15119 407 aa2.87□□□□□ -1.95
LEMD3-206ENST00000545026 DNAL1Q4LDG9 190 aa2.87□□□□□ -1.95
LEMD3-206ENST00000545026 DRAM2Q6UX65 266 aa2.87□□□□□ -1.95
LEMD3-206ENST00000545026 SCGB1D4Q6XE38 83 aa2.87□□□□□ -1.95
LEMD3-206ENST00000545026 OR51H1Q8NH63 302 aa2.87□□□□□ -1.95
LEMD3-206ENST00000545026 MED18Q9BUE0 208 aa2.87□□□□□ -1.95
LEMD3-206ENST00000545026 MRPS16Q9Y3D3 137 aaKnown RBP2.87□□□□□ -1.95
LEMD3-206ENST00000545026 SNX10Q9Y5X0 201 aa2.87□□□□□ -1.95
LEMD3-206ENST00000545026 COL18A1P39060 1754 aa2.87□□□□□ -1.95
LEMD3-206ENST00000545026 C3orf84H3BNL1 204 aa2.86□□□□□ -1.95
LEMD3-206ENST00000545026 ZNF73O43830 326 aaPredicted RBP2.86□□□□□ -1.95
LEMD3-206ENST00000545026 FUSP35637 526 aaKnown RBP eCLIP2.86□□□□□ -1.95
LEMD3-206ENST00000545026 RPL14P50914 215 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms