RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 ZNF439Q8NDP4 499 aa18.29■□□□□ 0.52
SFSWAP-204ENST00000535399 OR10V1Q8NGI7 309 aa18.29■□□□□ 0.52
SFSWAP-204ENST00000535399 CMSS1Q9BQ75 279 aaKnown RBP18.29■□□□□ 0.52
SFSWAP-204ENST00000535399 ATG5Q9H1Y0 275 aa18.29■□□□□ 0.52
SFSWAP-204ENST00000535399 TENM1Q9UKZ4 2725 aa18.28■□□□□ 0.52
SFSWAP-204ENST00000535399 OOSP1A8MZH6 123 aa18.28■□□□□ 0.52
SFSWAP-204ENST00000535399 SLC31A2O15432 143 aa18.28■□□□□ 0.52
SFSWAP-204ENST00000535399 GNB3P16520 340 aa18.28■□□□□ 0.52
SFSWAP-204ENST00000535399 RAG2P55895 527 aa18.28■□□□□ 0.52
SFSWAP-204ENST00000535399 SCAND1P57086 179 aa18.28■□□□□ 0.52
SFSWAP-204ENST00000535399 NCS1P62166 190 aa18.28■□□□□ 0.52
SFSWAP-204ENST00000535399 HTD2P86397 168 aa18.28■□□□□ 0.52
SFSWAP-204ENST00000535399 MADCAM1Q13477 382 aa18.28■□□□□ 0.52
SFSWAP-204ENST00000535399 GNMTQ14749 295 aa18.28■□□□□ 0.52
SFSWAP-204ENST00000535399 DHRS7BQ6IAN0 325 aaPredicted RBP18.28■□□□□ 0.52
SFSWAP-204ENST00000535399 OR52L2PQ8NGH6 319 aa18.28■□□□□ 0.52
SFSWAP-204ENST00000535399 OR5H6Q8NGV6 325 aa18.28■□□□□ 0.52
SFSWAP-204ENST00000535399 OR10X1Q8NGY0 326 aa18.28■□□□□ 0.52
SFSWAP-204ENST00000535399 SETD6Q8TBK2 473 aa18.28■□□□□ 0.52
SFSWAP-204ENST00000535399 RPEQ96AT9 228 aa18.28■□□□□ 0.52
SFSWAP-204ENST00000535399 Q9N2K0 584 aa18.28■□□□□ 0.52
SFSWAP-204ENST00000535399 OR2S2Q9NQN1 319 aa18.28■□□□□ 0.52
SFSWAP-204ENST00000535399 JPT1Q9UK76 154 aa18.28■□□□□ 0.52
SFSWAP-204ENST00000535399 POM121CA8CG34 1229 aa18.27■□□□□ 0.52
SFSWAP-204ENST00000535399 CHST1O43916 411 aa18.27■□□□□ 0.52
SFSWAP-204ENST00000535399 MDKP21741 143 aaPredicted RBP18.27■□□□□ 0.52
SFSWAP-204ENST00000535399 DIAPH2-AS1Q14236 149 aa18.27■□□□□ 0.52
SFSWAP-204ENST00000535399 LIAT1Q6ZQX7 453 aa18.27■□□□□ 0.52
SFSWAP-204ENST00000535399 GALMQ96C23 342 aa18.27■□□□□ 0.52
SFSWAP-204ENST00000535399 SLC25A38Q96DW6 304 aa18.27■□□□□ 0.52
SFSWAP-204ENST00000535399 OCSTAMPQ9BR26 566 aa18.27■□□□□ 0.52
SFSWAP-204ENST00000535399 NAA50Q9GZZ1 169 aaKnown RBP18.27■□□□□ 0.52
SFSWAP-204ENST00000535399 ETV7Q9Y603 341 aa18.27■□□□□ 0.52
SFSWAP-204ENST00000535399 TMEM127O75204 238 aa18.26■□□□□ 0.51
SFSWAP-204ENST00000535399 ZNF134P52741 427 aa18.26■□□□□ 0.51
SFSWAP-204ENST00000535399 MORN2Q502X0 79 aa18.26■□□□□ 0.51
SFSWAP-204ENST00000535399 CT45A1Q5HYN5 189 aa18.26■□□□□ 0.51
SFSWAP-204ENST00000535399 CCDC144NLQ6NUI1 221 aa18.26■□□□□ 0.51
SFSWAP-204ENST00000535399 Q6ZSV7 163 aa18.26■□□□□ 0.51
SFSWAP-204ENST00000535399 SLC25A48Q6ZT89 311 aaKnown RBP18.26■□□□□ 0.51
SFSWAP-204ENST00000535399 ANKRD13BQ86YJ7 626 aa18.26■□□□□ 0.51
SFSWAP-204ENST00000535399 OR4F5Q8NH21 305 aa18.26■□□□□ 0.51
SFSWAP-204ENST00000535399 CT45A3Q8NHU0 189 aa18.26■□□□□ 0.51
SFSWAP-204ENST00000535399 TOMM40LQ969M1 308 aa18.26■□□□□ 0.51
SFSWAP-204ENST00000535399 RHBDL2Q9NX52 303 aa18.26■□□□□ 0.51
SFSWAP-204ENST00000535399 ABRACLQ9P1F3 81 aa18.26■□□□□ 0.51
SFSWAP-204ENST00000535399 MGAT4AQ9UM21 535 aa18.26■□□□□ 0.51
SFSWAP-204ENST00000535399 MMP24Q9Y5R2 645 aa18.26■□□□□ 0.51
SFSWAP-204ENST00000535399 SERPINE3A8MV23 424 aa18.25■□□□□ 0.51
SFSWAP-204ENST00000535399 GABARAPO95166 117 aa18.25■□□□□ 0.51
SFSWAP-204ENST00000535399 CD3GP09693 182 aa18.25■□□□□ 0.51
SFSWAP-204ENST00000535399 PPP1CCP36873 323 aaKnown RBP18.25■□□□□ 0.51
SFSWAP-204ENST00000535399 SERPINB10P48595 397 aa18.25■□□□□ 0.51
SFSWAP-204ENST00000535399 VBP1P61758 197 aa18.25■□□□□ 0.51
SFSWAP-204ENST00000535399 HLA-DRB3P79483 266 aa18.25■□□□□ 0.51
SFSWAP-204ENST00000535399 TMEM219Q86XT9 240 aa18.25■□□□□ 0.51
SFSWAP-204ENST00000535399 CROCCP3Q8IVE0 287 aa18.25■□□□□ 0.51
SFSWAP-204ENST00000535399 ST6GALNAC6Q969X2 333 aa18.25■□□□□ 0.51
SFSWAP-204ENST00000535399 RAB18Q9NP72 206 aa18.25■□□□□ 0.51
SFSWAP-204ENST00000535399 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.25■□□□□ 0.51
SFSWAP-204ENST00000535399 A0A075B6Q4 140 aa18.24■□□□□ 0.51
SFSWAP-204ENST00000535399 A0A1W2PPI3 338 aa18.24■□□□□ 0.51
SFSWAP-204ENST00000535399 YPEL1O60688 119 aa18.24■□□□□ 0.51
SFSWAP-204ENST00000535399 TSPAN9O75954 239 aa18.24■□□□□ 0.51
SFSWAP-204ENST00000535399 CD24P25063 80 aa18.24■□□□□ 0.51
SFSWAP-204ENST00000535399 BRS3P32247 399 aa18.24■□□□□ 0.51
SFSWAP-204ENST00000535399 RAB7AP51149 207 aa18.24■□□□□ 0.51
SFSWAP-204ENST00000535399 ARHGDIBP52566 201 aa18.24■□□□□ 0.51
SFSWAP-204ENST00000535399 FBLN7Q53RD9 439 aa18.24■□□□□ 0.51
SFSWAP-204ENST00000535399 LY6G6FQ5SQ64 297 aa18.24■□□□□ 0.51
SFSWAP-204ENST00000535399 STEAP3Q658P3 488 aa18.24■□□□□ 0.51
SFSWAP-204ENST00000535399 IL1F10Q8WWZ1 152 aa18.24■□□□□ 0.51
SFSWAP-204ENST00000535399 YPEL2Q96QA6 119 aa18.24■□□□□ 0.51
SFSWAP-204ENST00000535399 PITPNC1Q9UKF7 332 aa18.24■□□□□ 0.51
SFSWAP-204ENST00000535399 ELF5Q9UKW6 265 aaPredicted RBP18.24■□□□□ 0.51
SFSWAP-204ENST00000535399 SPATA2Q9UM82 520 aa18.24■□□□□ 0.51
SFSWAP-204ENST00000535399 TIMM23O14925 209 aa18.23■□□□□ 0.51
SFSWAP-204ENST00000535399 SCGNO76038 276 aa18.23■□□□□ 0.51
SFSWAP-204ENST00000535399 FCGR3AP08637 254 aa18.23■□□□□ 0.51
SFSWAP-204ENST00000535399 SCTP09683 121 aa18.23■□□□□ 0.51
SFSWAP-204ENST00000535399 MNDAP41218 407 aa18.23■□□□□ 0.51
SFSWAP-204ENST00000535399 ZNF137PP52743 207 aa18.23■□□□□ 0.51
SFSWAP-204ENST00000535399 ZNF816Q0VGE8 651 aaPredicted RBP18.23■□□□□ 0.51
SFSWAP-204ENST00000535399 ARL6IP1Q15041 203 aa18.23■□□□□ 0.51
SFSWAP-204ENST00000535399 CTF1Q16619 201 aa18.23■□□□□ 0.51
SFSWAP-204ENST00000535399 CDNFQ49AH0 187 aa18.23■□□□□ 0.51
SFSWAP-204ENST00000535399 GPR107Q5VW38 600 aa18.23■□□□□ 0.51
SFSWAP-204ENST00000535399 OR8H3Q8N146 312 aa18.23■□□□□ 0.51
SFSWAP-204ENST00000535399 SLC25A46Q96AG3 418 aa18.23■□□□□ 0.51
SFSWAP-204ENST00000535399 C16orf95Q9H693 158 aa18.23■□□□□ 0.51
SFSWAP-204ENST00000535399 BEX1Q9HBH7 125 aa18.23■□□□□ 0.51
SFSWAP-204ENST00000535399 A0A1B0GUS0 222 aa18.22■□□□□ 0.51
SFSWAP-204ENST00000535399 CLPSL1A2RUU4 121 aa18.22■□□□□ 0.51
SFSWAP-204ENST00000535399 FAM90A9PA6NNJ1 464 aa18.22■□□□□ 0.51
SFSWAP-204ENST00000535399 TRDCB7Z8K6 153 aa18.22■□□□□ 0.51
SFSWAP-204ENST00000535399 HSD17B6O14756 317 aa18.22■□□□□ 0.51
SFSWAP-204ENST00000535399 MRPS15P82914 257 aaKnown RBP18.22■□□□□ 0.51
SFSWAP-204ENST00000535399 ZNF260Q3ZCT1 412 aa18.22■□□□□ 0.51
SFSWAP-204ENST00000535399 GPR141Q7Z602 305 aa18.22■□□□□ 0.51
SFSWAP-204ENST00000535399 DRAM1Q8N682 238 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms