RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 FOXE3Q13461 319 aa13.21□□□□□ -0.29
CPSF1-207ENST00000531727 GPR50Q13585 617 aa13.21□□□□□ -0.29
CPSF1-207ENST00000531727 LAIR2Q6ISS4 152 aa13.21□□□□□ -0.29
CPSF1-207ENST00000531727 FAM71E2Q8N5Q1 922 aa13.21□□□□□ -0.29
CPSF1-207ENST00000531727 NKAIN3Q8N8D7 197 aa13.21□□□□□ -0.29
CPSF1-207ENST00000531727 RNF152Q8N8N0 203 aa13.21□□□□□ -0.29
CPSF1-207ENST00000531727 THRSPQ92748 146 aa13.21□□□□□ -0.29
CPSF1-207ENST00000531727 DUX3Q96PT4 197 aa13.21□□□□□ -0.29
CPSF1-207ENST00000531727 PSORS1C1Q9UIG5 152 aa13.21□□□□□ -0.29
CPSF1-207ENST00000531727 UBE2QL1A1L167 161 aa13.2□□□□□ -0.3
CPSF1-207ENST00000531727 CCL24O00175 119 aa13.2□□□□□ -0.3
CPSF1-207ENST00000531727 MYL12BO14950 172 aa13.2□□□□□ -0.3
CPSF1-207ENST00000531727 LANCL1O43813 399 aa13.2□□□□□ -0.3
CPSF1-207ENST00000531727 F2RL1P55085 397 aa13.2□□□□□ -0.3
CPSF1-207ENST00000531727 WNT4P56705 351 aa13.2□□□□□ -0.3
CPSF1-207ENST00000531727 CFHR3Q02985 330 aa13.2□□□□□ -0.3
CPSF1-207ENST00000531727 CXorf66Q5JRM2 361 aaPredicted RBP13.2□□□□□ -0.3
CPSF1-207ENST00000531727 STEAP3Q658P3 488 aa13.2□□□□□ -0.3
CPSF1-207ENST00000531727 SIGIRRQ6IA17 410 aa13.2□□□□□ -0.3
CPSF1-207ENST00000531727 UNQ9370/PRO34162Q6UXP9 181 aa13.2□□□□□ -0.3
CPSF1-207ENST00000531727 C8orf59Q8N0T1 100 aaPredicted RBP13.2□□□□□ -0.3
CPSF1-207ENST00000531727 TFAP2CQ92754 450 aa13.2□□□□□ -0.3
CPSF1-207ENST00000531727 HSPB9Q9BQS6 159 aa13.2□□□□□ -0.3
CPSF1-207ENST00000531727 UQCC2Q9BRT2 126 aa13.2□□□□□ -0.3
CPSF1-207ENST00000531727 DCLRE1BQ9H816 532 aa13.2□□□□□ -0.3
CPSF1-207ENST00000531727 TAF9BQ9HBM6 251 aa13.2□□□□□ -0.3
CPSF1-207ENST00000531727 PLCXD1Q9NUJ7 323 aa13.2□□□□□ -0.3
CPSF1-207ENST00000531727 MBNL3Q9NUK0 354 aaKnown RBP13.2□□□□□ -0.3
CPSF1-207ENST00000531727 ZMAT5Q9UDW3 170 aaKnown RBP13.2□□□□□ -0.3
CPSF1-207ENST00000531727 PDCD6O75340 191 aa13.19□□□□□ -0.3
CPSF1-207ENST00000531727 ELANEP08246 267 aa13.19□□□□□ -0.3
CPSF1-207ENST00000531727 GNAO1P09471 354 aa13.19□□□□□ -0.3
CPSF1-207ENST00000531727 MAPK3P27361 379 aaPredicted RBP13.19□□□□□ -0.3
CPSF1-207ENST00000531727 SOX6P35712 828 aa13.19□□□□□ -0.3
CPSF1-207ENST00000531727 CDX1P47902 265 aaPredicted RBP13.19□□□□□ -0.3
CPSF1-207ENST00000531727 GP2P55259 537 aaKnown RBP13.19□□□□□ -0.3
CPSF1-207ENST00000531727 LSAMPQ13449 338 aa13.19□□□□□ -0.3
CPSF1-207ENST00000531727 KIR2DS1Q14954 304 aa13.19□□□□□ -0.3
CPSF1-207ENST00000531727 MORN2Q502X0 79 aa13.19□□□□□ -0.3
CPSF1-207ENST00000531727 C11orf87Q6NUJ2 197 aa13.19□□□□□ -0.3
CPSF1-207ENST00000531727 LCNL1Q6ZST4 164 aa13.19□□□□□ -0.3
CPSF1-207ENST00000531727 AHSA2Q719I0 299 aa13.19□□□□□ -0.3
CPSF1-207ENST00000531727 ZNF554Q86TJ5 538 aa13.19□□□□□ -0.3
CPSF1-207ENST00000531727 OR8U1Q8NH10 309 aa13.19□□□□□ -0.3
CPSF1-207ENST00000531727 FBLIM1Q8WUP2 373 aa13.19□□□□□ -0.3
CPSF1-207ENST00000531727 RBMXL1Q96E39 390 aaKnown RBP13.19□□□□□ -0.3
CPSF1-207ENST00000531727 CYYR1Q96J86 154 aa13.19□□□□□ -0.3
CPSF1-207ENST00000531727 OR2S2Q9NQN1 319 aa13.19□□□□□ -0.3
CPSF1-207ENST00000531727 KCNIP1Q9NZI2 227 aa13.19□□□□□ -0.3
CPSF1-207ENST00000531727 GHRLQ9UBU3 117 aa13.19□□□□□ -0.3
CPSF1-207ENST00000531727 ZNF580Q9UK33 172 aa13.19□□□□□ -0.3
CPSF1-207ENST00000531727 IGHG4P01861 327 aa13.18□□□□□ -0.3
CPSF1-207ENST00000531727 IGF1P05019 195 aa13.18□□□□□ -0.3
CPSF1-207ENST00000531727 VDAC1P21796 283 aa13.18□□□□□ -0.3
CPSF1-207ENST00000531727 RAB25P57735 213 aa13.18□□□□□ -0.3
CPSF1-207ENST00000531727 DGCR2P98153 550 aa13.18□□□□□ -0.3
CPSF1-207ENST00000531727 CD69Q07108 199 aa13.18□□□□□ -0.3
CPSF1-207ENST00000531727 DCTN2Q13561 401 aaKnown RBP13.18□□□□□ -0.3
CPSF1-207ENST00000531727 GNMTQ14749 295 aa13.18□□□□□ -0.3
CPSF1-207ENST00000531727 RCN1Q15293 331 aa13.18□□□□□ -0.3
CPSF1-207ENST00000531727 DEFB136Q30KP8 78 aa13.18□□□□□ -0.3
CPSF1-207ENST00000531727 NANOGP1Q8N7R0 232 aa13.18□□□□□ -0.3
CPSF1-207ENST00000531727 MRPL30Q8TCC3 161 aaKnown RBP13.18□□□□□ -0.3
CPSF1-207ENST00000531727 FAM46BQ96A09 425 aa13.18□□□□□ -0.3
CPSF1-207ENST00000531727 B9D2Q9BPU9 175 aa13.18□□□□□ -0.3
CPSF1-207ENST00000531727 ABHD14AQ9BUJ0 271 aa13.18□□□□□ -0.3
CPSF1-207ENST00000531727 CST11Q9H112 138 aa13.18□□□□□ -0.3
CPSF1-207ENST00000531727 JPT1Q9UK76 154 aa13.18□□□□□ -0.3
CPSF1-207ENST00000531727 HTD2P86397 168 aa13.17□□□□□ -0.3
CPSF1-207ENST00000531727 C5orf24Q7Z6I8 188 aa13.17□□□□□ -0.3
CPSF1-207ENST00000531727 ODF3L1Q8IXM7 274 aa13.17□□□□□ -0.3
CPSF1-207ENST00000531727 BPIFB6Q8NFQ5 453 aa13.17□□□□□ -0.3
CPSF1-207ENST00000531727 OR52L2PQ8NGH6 319 aa13.17□□□□□ -0.3
CPSF1-207ENST00000531727 FKBP14Q9NWM8 211 aa13.17□□□□□ -0.3
CPSF1-207ENST00000531727 ZNF107Q9UII5 783 aaPredicted RBP13.17□□□□□ -0.3
CPSF1-207ENST00000531727 UBBP0CG47 229 aa13.16□□□□□ -0.3
CPSF1-207ENST00000531727 OR5H8P0DN80 308 aa13.16□□□□□ -0.3
CPSF1-207ENST00000531727 PSMB8P28062 276 aa13.16□□□□□ -0.3
CPSF1-207ENST00000531727 PPP1CCP36873 323 aaKnown RBP13.16□□□□□ -0.3
CPSF1-207ENST00000531727 MMDQ15546 238 aa13.16□□□□□ -0.3
CPSF1-207ENST00000531727 NKAPLQ5M9Q1 402 aa13.16□□□□□ -0.3
CPSF1-207ENST00000531727 C6orf141Q5SZD1 244 aa13.16□□□□□ -0.3
CPSF1-207ENST00000531727 OR5M8Q8NGP6 311 aa13.16□□□□□ -0.3
CPSF1-207ENST00000531727 C4orf3Q8WVX3 66 aa13.16□□□□□ -0.3
CPSF1-207ENST00000531727 KCTD7Q96MP8 289 aa13.16□□□□□ -0.3
CPSF1-207ENST00000531727 ERGIC3Q9Y282 383 aa13.16□□□□□ -0.3
CPSF1-207ENST00000531727 DNAH9Q9NYC9 4486 aa13.15□□□□□ -0.3
CPSF1-207ENST00000531727 YPEL1O60688 119 aa13.15□□□□□ -0.3
CPSF1-207ENST00000531727 RAMP3O60896 148 aa13.15□□□□□ -0.3
CPSF1-207ENST00000531727 RGS11O94810 467 aa13.15□□□□□ -0.3
CPSF1-207ENST00000531727 SLC2A2P11168 524 aaPredicted RBP13.15□□□□□ -0.3
CPSF1-207ENST00000531727 MYF6P23409 242 aa13.15□□□□□ -0.3
CPSF1-207ENST00000531727 CHATP28329 748 aa13.15□□□□□ -0.3
CPSF1-207ENST00000531727 INSL4Q14641 139 aa13.15□□□□□ -0.3
CPSF1-207ENST00000531727 ACSM3Q53FZ2 586 aa13.15□□□□□ -0.3
CPSF1-207ENST00000531727 LY6G6FQ5SQ64 297 aa13.15□□□□□ -0.3
CPSF1-207ENST00000531727 C9orf66Q5T8R8 295 aa13.15□□□□□ -0.3
CPSF1-207ENST00000531727 OGFRL1Q5TC84 451 aaPredicted RBP13.15□□□□□ -0.3
CPSF1-207ENST00000531727 GALMQ96C23 342 aa13.15□□□□□ -0.3
CPSF1-207ENST00000531727 NEDD4LQ96PU5 975 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms