RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	ATP6V1G2-DDX39B	F2Z307	99 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006		H0YIZ8	118 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006		K7EM74	188 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	IFNL4	K9M1U5	179 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	SPINT2	O43291	252 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	JTB	O76095	146 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	IGKV1-13	P0DP09	117 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	SFTPC	P11686	197 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	EPHA1	P21709	976 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	UCP1	P25874	307 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	GLRX	P35754	106 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	P2RY1	P47900	373 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	CEBPD	P49716	269 aa	Predicted RBP	9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	KRBOX4	Q5JUW0	171 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006		Q6ZPA2	131 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	FAM90A1	Q86YD7	464 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	WFDC8	Q8IUA0	241 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	BVES	Q8NE79	360 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	PRR7	Q8TB68	274 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	GLYATL2	Q8WU03	294 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	MSI2	Q96DH6	328 aa	Known RBP	9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	RRNAD1	Q96FB5	475 aa	Known RBP	9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	NARS2	Q96I59	477 aa	Known RBP	9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	SLX1A	Q9BQ83	275 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	PLEKHF2	Q9H8W4	249 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	TAF9B	Q9HBM6	251 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	NGB	Q9NPG2	151 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	OR1A1	Q9P1Q5	309 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	FBXL17	Q9UF56	701 aa		9.09	□□□□□ -0.95
SPIDR-222	ENST00000524006	MYO9A	B2RTY4	2548 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	DSCAML1	Q8TD84	2053 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	TRAV39	A0A0B4J263	110 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	NKX2-6	A6NCS4	301 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	MFSD2B	A6NFX1	497 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	MSGN1	A6NI15	193 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	ZNF705E	A8MWA4	302 aa	Predicted RBP	9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	NUDT19	A8MXV4	375 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	C16orf97	H3BN30	126 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	WNT9B	O14905	357 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	KCNAB3	O43448	404 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	ADAM20	O43506	726 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	SPRY3	O43610	288 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	SSSCA1	O60232	199 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	IGHV3-13	P01766	116 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	MBP	P02686	304 aa	Predicted RBP	9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	GAPDH	P04406	335 aa	Known RBP	9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	HKR1	P10072	659 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	ZNF250	P15622	560 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	VDAC1	P21796	283 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	F2R	P25116	425 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	OR3A1	P47881	315 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	CAV2	P51636	162 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	P2RX3	P56373	397 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	COL10A1	Q03692	680 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	TLE1	Q04724	770 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	EDDM3A	Q14507	147 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	GPR157	Q5UAW9	335 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	ZNF324B	Q6AW86	544 aa	Predicted RBP	9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	SELENOH	Q8IZQ5	122 aa	Known RBP	9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	RPRML	Q8N4K4	120 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	TMED6	Q8WW62	240 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	TMEM56	Q96MV1	263 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	SMIM3	Q9BZL3	60 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	PPP1R3C	Q9UQK1	317 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	WIPI2	Q9Y4P8	454 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	TMEM56-RWDD3	S4R434	201 aa		9.08	□□□□□ -0.96
SPIDR-222	ENST00000524006	SPTBN1	Q01082	2364 aa	Known RBP	9.07	□□□□□ -0.96
SPIDR-222	ENST00000524006	RP1L1	Q8IWN7	2480 aa	Predicted RBP	9.07	□□□□□ -0.96
SPIDR-222	ENST00000524006	IGKV1-6	A0A0C4DH72	117 aa		9.07	□□□□□ -0.96
SPIDR-222	ENST00000524006		A0A0G2JNJ9	132 aa		9.07	□□□□□ -0.96
SPIDR-222	ENST00000524006	NKX6-3	A6NJ46	265 aa		9.07	□□□□□ -0.96
SPIDR-222	ENST00000524006	TEX46	H3BTG2	121 aa		9.07	□□□□□ -0.96
SPIDR-222	ENST00000524006	PGLYRP1	O75594	196 aa	Predicted RBP	9.07	□□□□□ -0.96
SPIDR-222	ENST00000524006	CEACAM6	P40199	344 aa		9.07	□□□□□ -0.96
SPIDR-222	ENST00000524006	RPL23A	P62750	156 aa	Known RBP	9.07	□□□□□ -0.96
SPIDR-222	ENST00000524006	BLOC1S1	P78537	153 aa		9.07	□□□□□ -0.96
SPIDR-222	ENST00000524006	TNFAIP6	P98066	277 aa	Predicted RBP	9.07	□□□□□ -0.96
SPIDR-222	ENST00000524006	C20orf204	Q6ZNR8	217 aa		9.07	□□□□□ -0.96
SPIDR-222	ENST00000524006		Q6ZR03	302 aa		9.07	□□□□□ -0.96
SPIDR-222	ENST00000524006	MOGAT3	Q86VF5	341 aa		9.07	□□□□□ -0.96
SPIDR-222	ENST00000524006	LDLRAD3	Q86YD5	345 aa		9.07	□□□□□ -0.96
SPIDR-222	ENST00000524006	FAM219A	Q8IW50	185 aa		9.07	□□□□□ -0.96
SPIDR-222	ENST00000524006	ZBTB34	Q8NCN2	500 aa		9.07	□□□□□ -0.96
SPIDR-222	ENST00000524006	MEGF10	Q96KG7	1140 aa		9.07	□□□□□ -0.96
SPIDR-222	ENST00000524006	OR2V2	Q96R30	315 aa		9.07	□□□□□ -0.96
SPIDR-222	ENST00000524006	MBNL3	Q9NUK0	354 aa	Known RBP	9.07	□□□□□ -0.96
SPIDR-222	ENST00000524006		Q9UFV3	132 aa		9.07	□□□□□ -0.96
SPIDR-222	ENST00000524006	NUP50	Q9UKX7	468 aa		9.07	□□□□□ -0.96
SPIDR-222	ENST00000524006	ITPR2	Q14571	2701 aa		9.06	□□□□□ -0.96
SPIDR-222	ENST00000524006	HCFC1	P51610	2035 aa		9.06	□□□□□ -0.96
SPIDR-222	ENST00000524006	ZSCAN5B	A6NJL1	495 aa		9.06	□□□□□ -0.96
SPIDR-222	ENST00000524006		A8MXE2	369 aa		9.06	□□□□□ -0.96
SPIDR-222	ENST00000524006	MED6	O75586	246 aa		9.06	□□□□□ -0.96
SPIDR-222	ENST00000524006	PTBP3	O95758	552 aa	Known RBP	9.06	□□□□□ -0.96
SPIDR-222	ENST00000524006	HBZ	P02008	142 aa		9.06	□□□□□ -0.96
SPIDR-222	ENST00000524006	OR8U9	P0C7N5	309 aa		9.06	□□□□□ -0.96
SPIDR-222	ENST00000524006	MMP9	P14780	707 aa		9.06	□□□□□ -0.96
SPIDR-222	ENST00000524006	PTAFR	P25105	342 aa		9.06	□□□□□ -0.96
SPIDR-222	ENST00000524006	LMO1	P25800	156 aa		9.06	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms