RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 RPL36Q9Y3U8 105 aaKnown RBP6.47□□□□□ -1.37
HDAC3-216ENST00000523088 SNRNP200O75643 2136 aaKnown RBP6.47□□□□□ -1.37
HDAC3-216ENST00000523088 ASH1LQ9NR48 2969 aaKnown RBP6.47□□□□□ -1.37
HDAC3-216ENST00000523088 NUP210LQ5VU65 1888 aa6.47□□□□□ -1.37
HDAC3-216ENST00000523088 RP1L1Q8IWN7 2480 aaPredicted RBP6.47□□□□□ -1.37
HDAC3-216ENST00000523088 TRAV36DV7A0A075B6V5 113 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 A0A0B4J2E0 115 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 A0A0G2JLM5 398 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 LOC100130705A0A1B0GUX0 176 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 TINCRA0A1B0GVN0 87 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 A0A1B0GX12 115 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 hADV38S2A0JD32 116 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 FABP5P3A8MUU1 101 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 NPIPB6E9PJ23 425 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 C3orf80F5H4A9 247 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 M0R2Z0 102 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 NKX2-8O15522 239 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 SFTA3P0C7M3 94 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 FAM157CP0CG43 387 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 PGA3P0DJD8 388 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 GNB3P16520 340 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 ATF1P18846 271 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 EDN2P20800 178 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 CD34P28906 385 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 PRDX3P30048 256 aaKnown RBP6.46□□□□□ -1.38
HDAC3-216ENST00000523088 CX3CR1P49238 355 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 LHX2P50458 406 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 CLDN15P56746 228 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 LCN6P62502 163 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 SIRPAP78324 504 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 MALLQ13021 153 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 GINS1Q14691 196 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 MAD2L1BPQ15013 274 aaPredicted RBP6.46□□□□□ -1.38
HDAC3-216ENST00000523088 PCOLCEQ15113 449 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 ELAVL1Q15717 326 aaKnown RBP6.46□□□□□ -1.38
HDAC3-216ENST00000523088 SYPL1Q16563 259 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 CTU2Q2VPK5 515 aaKnown RBP6.46□□□□□ -1.38
HDAC3-216ENST00000523088 DEFB109BQ30KR1 87 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 VWA2Q5GFL6 755 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 DCST2Q5T1A1 773 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 TMEM200BQ69YZ2 307 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 ZNF787Q6DD87 383 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 C8orf82Q6P1X6 216 aaPredicted RBP6.46□□□□□ -1.38
HDAC3-216ENST00000523088 KRTCAP2Q8N6L1 136 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 KIR3DL3Q8N743 410 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 OR1B1Q8NGR6 318 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 OR2G3Q8NGZ4 309 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 OR52I2Q8NH67 350 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 NEIL3Q8TAT5 605 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 CT55Q8WUE5 264 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 RNF138Q8WVD3 245 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 ZDHHC16Q969W1 377 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 ZNF501Q96CX3 271 aaPredicted RBP6.46□□□□□ -1.38
HDAC3-216ENST00000523088 TBX15Q96SF7 602 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 NRTNQ99748 197 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 ATG5Q9H1Y0 275 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 POPDC3Q9HBV1 291 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 ASF1AQ9Y294 204 aa6.46□□□□□ -1.38
HDAC3-216ENST00000523088 FLNBO75369 2602 aaKnown RBP6.46□□□□□ -1.38
HDAC3-216ENST00000523088 KANTRA0A1W2PQU2 76 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 TMEM129A0AVI4 362 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 CDC14CA4D256 554 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 C2orf72A6NCS6 295 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 OR2W5A6NFC9 320 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 GGT3PA6NGU5 568 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 ZNF670-ZNF695F2Z2N8 137 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 ZNF195O14628 629 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 BCL2L11O43521 198 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 TRAF3IP2O43734 574 aaPredicted RBP6.45□□□□□ -1.38
HDAC3-216ENST00000523088 CLDN1O95832 211 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 CHRM4P08173 479 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 TRGC1P0CF51 173 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 HIST1H1DP16402 221 aaKnown RBP6.45□□□□□ -1.38
HDAC3-216ENST00000523088 SRIP30626 198 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 DCTP40126 519 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 OR1D4P47884 311 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 GSK3BP49841 420 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 TAS2R31P59538 309 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 RPS25P62851 125 aaKnown RBP6.45□□□□□ -1.38
HDAC3-216ENST00000523088 ZNF415Q09FC8 603 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 ZNF266Q14584 549 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 BATFQ16520 125 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 FAM174BQ3ZCQ3 159 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 SPANXN3Q5MJ09 141 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 AADACL2Q6P093 401 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 ARL9Q6T311 187 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 LINC00336Q6ZUF6 198 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 PPP1R27Q86WC6 154 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 STHQ8IWL8 128 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 OSR2Q8N2R0 312 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 CISD2Q8N5K1 135 aaKnown RBP6.45□□□□□ -1.38
HDAC3-216ENST00000523088 COX18Q8N8Q8 333 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 OR10Q1Q8NGQ4 319 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 OR4L1Q8NH43 312 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 NEU4Q8WWR8 484 aaPredicted RBP6.45□□□□□ -1.38
HDAC3-216ENST00000523088 SLC25A46Q96AG3 418 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 APH1AQ96BI3 265 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 MUCL1Q96DR8 90 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 PITX2Q99697 317 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 ANAPC13Q9BS18 74 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms