RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 ZNF627Q7L945 461 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR2L13Q8N349 312 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR2C3Q8N628 320 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 TMEM251Q8N6I4 163 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR5H2Q8NGV7 314 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR6N2Q8NGY6 317 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR4C3Q8NH37 302 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 RNF128Q8TEB7 428 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 MBD3L1Q8WWY6 194 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 UBE2E3Q969T4 207 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 FAM46BQ96A09 425 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 DAZAP1Q96EP5 407 aaKnown RBP4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 PELI1Q96FA3 418 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 DGAT2Q96PD7 388 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 RASL10BQ96S79 203 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 ATP5SQ99766 215 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 SPIN2AQ99865 258 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 SPIN2BQ9BPZ2 258 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 TXNDC17Q9BRA2 123 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 RSPO3Q9BXY4 272 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 ULBP2Q9BZM5 246 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 RTN4RQ9BZR6 473 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 NPFFR1Q9GZQ6 430 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 EGLN3Q9H6Z9 239 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 IL23AQ9NPF7 189 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 SIGLEC8Q9NYZ4 499 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 IL36GQ9NZH8 169 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 C1RLQ9NZP8 487 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 RNF115Q9Y4L5 304 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 TMEM14AQ9Y6G1 99 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 MYO10Q9HD67 2058 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 SIP14410 1827 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 CKAP5Q14008 2032 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 PIKFYVEQ9Y2I7 2098 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 COL11A1P12107 1806 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 NUP98P52948 1817 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 LOC102724200A0A096LPH7 203 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 TRBV5-7A0A0A0MS05 114 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 C7orf71A4D174 169 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 GAGE12JA6NER3 117 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 GLOD5A6NK44 160 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 CD300LBA8K4G0 201 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 H7C1C5 153 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 F2RL2O00254 374 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 SIVA1O15304 175 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 NKX2-8O15522 239 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 MLNRO43193 412 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 GAGE7O76087 117 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 HLA-DQA2P01906 255 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 ADH4P08319 380 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 GAGE12FP0CL80 117 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 GAGE12GP0CL81 117 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 GAGE12IP0CL82 117 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 CT45A6P0DMU7 189 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 CT45A5P0DMU8 189 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 CT45A7P0DMV0 189 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 CEBPBP17676 345 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 PMCHP20382 165 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 SLC6A6P31641 620 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 DRD3P35462 400 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF93P35789 620 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 PPP1CCP36873 323 aaKnown RBP4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 CLDN6P56747 220 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 RPL15P61313 204 aaKnown RBP4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 GNB2P62879 340 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 GNG3P63215 75 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 SERF2P84101 59 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 GAGE4Q13068 117 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 PDE7AQ13946 482 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 NFATC4Q14934 902 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 LRRC75BQ2VPJ9 315 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 HLA-DRB5Q30154 266 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 GAGE13Q4V321 117 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 PDLIM3Q53GG5 364 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 CT45A1Q5HYN5 189 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 CLEC12AQ5QGZ9 265 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 SP5Q6BEB4 398 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF788Q6ZQV5 615 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 Q6ZS92 163 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 Q6ZSR6 202 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 BHLHA9Q7RTU4 235 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 H2BFWTQ7Z2G1 175 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 ADGRE4PQ86SQ3 457 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 CDC20BQ86Y33 519 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 FAM219AQ8IW50 185 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF595Q8IYB9 648 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 UMODL1-AS1Q8N2C9 162 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 CLDN19Q8N6F1 224 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 NPWQ8N729 165 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR4F17Q8NGA8 305 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR51A4Q8NGJ6 313 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 CT45A3Q8NHU0 189 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 PP6455Q8WZ26 134 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 NRGNQ92686 78 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 NEUROG1Q92886 237 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR4F4Q96R69 305 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 TBX5Q99593 518 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 TIMP4Q99727 224 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 KXD1Q9BQD3 176 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 SLC25A33Q9BSK2 321 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms