RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 CT45A3Q8NHU0 189 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 YTHDF1Q9BYJ9 559 aaKnown RBP9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 GNG12Q9UBI6 72 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 V9GY05 133 aa9.26□□□□□ -0.93
SH3RF1-205ENST00000511421 TRAV1-2A0A0B4J238 106 aa9.25□□□□□ -0.93
SH3RF1-205ENST00000511421 IGHV1-3A0A0C4DH29 117 aa9.25□□□□□ -0.93
SH3RF1-205ENST00000511421 TRDV1A0A1B0GX56 115 aa9.25□□□□□ -0.93
SH3RF1-205ENST00000511421 SH2D7A6NKC9 451 aaPredicted RBP9.25□□□□□ -0.93
SH3RF1-205ENST00000511421 CCRL2O00421 344 aa9.25□□□□□ -0.93
SH3RF1-205ENST00000511421 LDLRAD4O15165 306 aa9.25□□□□□ -0.93
SH3RF1-205ENST00000511421 SOCS1O15524 211 aa9.25□□□□□ -0.93
SH3RF1-205ENST00000511421 NAPSAO96009 420 aa9.25□□□□□ -0.93
SH3RF1-205ENST00000511421 GAPDHP04406 335 aaKnown RBP9.25□□□□□ -0.93
SH3RF1-205ENST00000511421 CD28P10747 220 aa9.25□□□□□ -0.93
SH3RF1-205ENST00000511421 REG1BP48304 166 aa9.25□□□□□ -0.93
SH3RF1-205ENST00000511421 ZNF137PP52743 207 aa9.25□□□□□ -0.93
SH3RF1-205ENST00000511421 TMEM50BP56557 158 aa9.25□□□□□ -0.93
SH3RF1-205ENST00000511421 CLDN12P56749 244 aa9.25□□□□□ -0.93
SH3RF1-205ENST00000511421 EBI3Q14213 229 aa9.25□□□□□ -0.93
SH3RF1-205ENST00000511421 C2orf68Q2NKX9 166 aa9.25□□□□□ -0.93
SH3RF1-205ENST00000511421 ABCA11PQ4W5N1 156 aa9.25□□□□□ -0.93
SH3RF1-205ENST00000511421 ZNF880Q6PDB4 577 aa9.25□□□□□ -0.93
SH3RF1-205ENST00000511421 SVOPQ8N4V2 548 aa9.25□□□□□ -0.93
SH3RF1-205ENST00000511421 OR51D1Q8NGF3 324 aa9.25□□□□□ -0.93
SH3RF1-205ENST00000511421 OR10V1Q8NGI7 309 aa9.25□□□□□ -0.93
SH3RF1-205ENST00000511421 KCNIP1Q9NZI2 227 aa9.25□□□□□ -0.93
SH3RF1-205ENST00000511421 LRRC42Q9Y546 428 aa9.25□□□□□ -0.93
SH3RF1-205ENST00000511421 M0QZK8 103 aa9.24□□□□□ -0.93
SH3RF1-205ENST00000511421 FBXO24O75426 580 aa9.24□□□□□ -0.93
SH3RF1-205ENST00000511421 CSF1P09603 554 aa9.24□□□□□ -0.93
SH3RF1-205ENST00000511421 GALP22466 123 aa9.24□□□□□ -0.93
SH3RF1-205ENST00000511421 PSMD7P51665 324 aa9.24□□□□□ -0.93
SH3RF1-205ENST00000511421 HTD2P86397 168 aa9.24□□□□□ -0.93
SH3RF1-205ENST00000511421 GNMTQ14749 295 aa9.24□□□□□ -0.93
SH3RF1-205ENST00000511421 HMGN3Q15651 99 aa9.24□□□□□ -0.93
SH3RF1-205ENST00000511421 C2orf76Q3KRA6 126 aa9.24□□□□□ -0.93
SH3RF1-205ENST00000511421 MORN2Q502X0 79 aa9.24□□□□□ -0.93
SH3RF1-205ENST00000511421 STEAP3Q658P3 488 aa9.24□□□□□ -0.93
SH3RF1-205ENST00000511421 OR52L2PQ8NGH6 319 aa9.24□□□□□ -0.93
SH3RF1-205ENST00000511421 RTN4IP1Q8WWV3 396 aaPredicted RBP9.24□□□□□ -0.93
SH3RF1-205ENST00000511421 FAM3DQ96BQ1 224 aa9.24□□□□□ -0.93
SH3RF1-205ENST00000511421 URM1Q9BTM9 101 aaKnown RBP9.24□□□□□ -0.93
SH3RF1-205ENST00000511421 OR2S2Q9NQN1 319 aa9.24□□□□□ -0.93
SH3RF1-205ENST00000511421 PLEKHJ1Q9NW61 149 aa9.24□□□□□ -0.93
SH3RF1-205ENST00000511421 MOB4Q9Y3A3 225 aa9.24□□□□□ -0.93
SH3RF1-205ENST00000511421 RRP15Q9Y3B9 282 aaKnown RBP9.24□□□□□ -0.93
SH3RF1-205ENST00000511421 TET2Q6N021 2002 aaPredicted RBP9.24□□□□□ -0.93
SH3RF1-205ENST00000511421 TRBV6-6A0A0A6YYG2 114 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 IGHV3-72A0A0B4J1Y9 119 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 IGKV1D-33P01593 117 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 IGKV1-33P01594 117 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 LPLP06858 475 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 TMEM11P17152 192 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 IL3RAP26951 378 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 OR10A3P58181 314 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 PLA2G7Q13093 441 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 HES1Q14469 280 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 HNF4GQ14541 408 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 ARSJQ5FYB0 599 aaPredicted RBP9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 HES5Q5TA89 166 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 MOB3BQ86TA1 216 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 IZUMO1Q8IYV9 350 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 FAM110DQ8TAY7 271 aaPredicted RBP9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 STEAP1Q9UHE8 339 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 JPT1Q9UK76 154 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 HSF4Q9ULV5 492 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 MEGF8Q7Z7M0 2845 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 NOTCH1P46531 2555 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 TMEM272A0A1B0GTI8 110 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 ADARB2-AS1A8MUL3 147 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 PDCD5O14737 125 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 PEX14O75381 377 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 PSMB9P28065 219 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 PPP1CCP36873 323 aaKnown RBP9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 VEGFCP49767 419 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 LY6G6FQ5SQ64 297 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 C22orf42Q6IC83 251 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 ZNF773Q6PK81 442 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 Q8N6K4 173 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 C5orf56Q8N8D9 126 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 FCGR1BQ92637 280 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 EAF1Q96JC9 268 aaPredicted RBP9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 CITED2Q99967 270 aaPredicted RBP9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 HDHD3Q9BSH5 251 aaPredicted RBP9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 AK3Q9UIJ7 227 aa9.23□□□□□ -0.93
SH3RF1-205ENST00000511421 IFITM5A6NNB3 132 aa9.22□□□□□ -0.93
SH3RF1-205ENST00000511421 ZNF736B4DX44 427 aaPredicted RBP9.22□□□□□ -0.93
SH3RF1-205ENST00000511421 FGF16O43320 207 aa9.22□□□□□ -0.93
SH3RF1-205ENST00000511421 YPEL1O60688 119 aa9.22□□□□□ -0.93
SH3RF1-205ENST00000511421 CD1BP29016 333 aa9.22□□□□□ -0.93
SH3RF1-205ENST00000511421 RANBP1P43487 201 aa9.22□□□□□ -0.93
SH3RF1-205ENST00000511421 CD83Q01151 205 aa9.22□□□□□ -0.93
SH3RF1-205ENST00000511421 PLAC9Q5JTB6 97 aa9.22□□□□□ -0.93
SH3RF1-205ENST00000511421 NR2C2APQ86WQ0 139 aa9.22□□□□□ -0.93
SH3RF1-205ENST00000511421 ODF3L1Q8IXM7 274 aa9.22□□□□□ -0.93
SH3RF1-205ENST00000511421 LYG1Q8N1E2 194 aa9.22□□□□□ -0.93
SH3RF1-205ENST00000511421 OR5AU1Q8NGC0 362 aa9.22□□□□□ -0.93
SH3RF1-205ENST00000511421 GALMQ96C23 342 aa9.22□□□□□ -0.93
SH3RF1-205ENST00000511421 ARHGAP5-AS1Q96IT6 56 aa9.22□□□□□ -0.93
SH3RF1-205ENST00000511421 YPEL2Q96QA6 119 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 190 ms