RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 IGHV3-13P01766 116 aa10.62□□□□□ -0.71
LIN54-210ENST00000510877 ANXA7P20073 488 aaKnown RBP10.62□□□□□ -0.71
LIN54-210ENST00000510877 PSMB6P28072 239 aa10.62□□□□□ -0.71
LIN54-210ENST00000510877 CMTM1Q8IZ96 169 aa10.62□□□□□ -0.71
LIN54-210ENST00000510877 CLDND2Q8NHS1 167 aa10.62□□□□□ -0.71
LIN54-210ENST00000510877 RBMXL1Q96E39 390 aaKnown RBP10.62□□□□□ -0.71
LIN54-210ENST00000510877 SOX7Q9BT81 388 aa10.62□□□□□ -0.71
LIN54-210ENST00000510877 VAMP8Q9BV40 100 aa10.62□□□□□ -0.71
LIN54-210ENST00000510877 RNF167Q9H6Y7 350 aa10.62□□□□□ -0.71
LIN54-210ENST00000510877 MED9Q9NWA0 146 aa10.62□□□□□ -0.71
LIN54-210ENST00000510877 TNRC6AQ8NDV7 1962 aaKnown RBP10.62□□□□□ -0.71
LIN54-210ENST00000510877 DEFB108AA8MXU0 73 aa10.62□□□□□ -0.71
LIN54-210ENST00000510877 IGHV1-46P01743 117 aa10.62□□□□□ -0.71
LIN54-210ENST00000510877 IGHV4-39P01824 125 aa10.62□□□□□ -0.71
LIN54-210ENST00000510877 C1QCP02747 245 aa10.62□□□□□ -0.71
LIN54-210ENST00000510877 FAM106CPP0CH98 169 aa10.62□□□□□ -0.71
LIN54-210ENST00000510877 CRYBB2P43320 205 aa10.62□□□□□ -0.71
LIN54-210ENST00000510877 MFGE8Q08431 387 aaPredicted RBP10.62□□□□□ -0.71
LIN54-210ENST00000510877 TPBGQ13641 420 aa10.62□□□□□ -0.71
LIN54-210ENST00000510877 SEM1Q6ZVN7 128 aa10.62□□□□□ -0.71
LIN54-210ENST00000510877 OR4X2Q8NGF9 303 aa10.62□□□□□ -0.71
LIN54-210ENST00000510877 OR8B12Q8NGG6 310 aa10.62□□□□□ -0.71
LIN54-210ENST00000510877 EDARADDQ8WWZ3 215 aa10.62□□□□□ -0.71
LIN54-210ENST00000510877 ZNF714Q96N38 554 aa10.62□□□□□ -0.71
LIN54-210ENST00000510877 TCRBV5S2A0A599 114 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 CEACAM18A8MTB9 384 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 PTGFRP43088 359 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 TAS2R46P59540 309 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 FGF12P61328 243 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 HIST1H3AP68431 136 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 OR2B11Q5JQS5 317 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 ATPAF1Q5TC12 328 aaPredicted RBP10.61□□□□□ -0.71
LIN54-210ENST00000510877 CHAC2Q8WUX2 184 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 NICN1Q9BSH3 213 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 HOXB5P09067 269 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 RPL29P47914 159 aaKnown RBP10.61□□□□□ -0.71
LIN54-210ENST00000510877 TMEM183BQ1AE95 376 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 ACOT6Q3I5F7 207 aaPredicted RBP10.61□□□□□ -0.71
LIN54-210ENST00000510877 PHYHD1Q5SRE7 291 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 Q6ZRG5 221 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 ZNF695Q8IW36 515 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 ZNF286AQ9HBT8 521 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 HRASLSQ9HDD0 168 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 NOX4Q9NPH5 578 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 TIMM8BQ9Y5J9 83 aaPredicted RBP10.61□□□□□ -0.71
LIN54-210ENST00000510877 GPR37O15354 613 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 IGF2P01344 180 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 COL8A2P25067 703 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 HTR1DP28221 377 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 DVL1P1P54792 670 aaPredicted RBP10.61□□□□□ -0.71
LIN54-210ENST00000510877 TMEM267Q0VDI3 215 aaPredicted RBP10.61□□□□□ -0.71
LIN54-210ENST00000510877 CATR1Q13166 79 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 MPPED2Q15777 294 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 NKAIN3Q8N8D7 197 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 SLC25A19Q9HC21 320 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 MDFIC2A0A1B0GVS7 189 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 TEX30Q5JUR7 227 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 FAM201AQ5SY85 155 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 GHSRQ92847 366 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 POM121L2Q96KW2 1035 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 ST6GALNAC5Q9BVH7 336 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 TMEM231Q9H6L2 316 aa10.61□□□□□ -0.71
LIN54-210ENST00000510877 CCKARP32238 428 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 ECI1P42126 302 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 OR10A3P58181 314 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 FAM162BQ5T6X4 162 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 LYG1Q8N1E2 194 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 RFLNBQ8N5W9 214 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 C11orf44Q8N8P7 122 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 PDCD1LG2Q9BQ51 273 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 BET1LQ9NYM9 111 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 SETXQ7Z333 2677 aaKnown RBP10.6□□□□□ -0.71
LIN54-210ENST00000510877 FREM1Q5H8C1 2179 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 J3QLI3 93 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 PTBP3O95758 552 aaKnown RBP10.6□□□□□ -0.71
LIN54-210ENST00000510877 LY6G6DO95868 133 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 HAND1O96004 215 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 SRPXP78539 464 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 C8orf46Q8TAG6 207 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 SEC11CQ9BY50 192 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 TINAGL1Q9GZM7 467 aaPredicted RBP10.6□□□□□ -0.71
LIN54-210ENST00000510877 MUC22E2RYF6 1773 aaPredicted RBP10.6□□□□□ -0.71
LIN54-210ENST00000510877 ARRDC5A6NEK1 342 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 NPIPB7O75200 414 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 SFTA3P0C7M3 94 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 METTL15P1P0C7V9 234 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 GPR12P47775 334 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 KRTAP10-9P60411 292 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 ENDOGQ14249 297 aaKnown RBP10.6□□□□□ -0.71
LIN54-210ENST00000510877 CLINT1Q14677 625 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 CST9LP1Q5W188 147 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 OSR2Q8N2R0 312 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 ZNF383Q8NA42 475 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 RNF133Q8WVZ7 376 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 RSRP1Q9BUV0 290 aa10.6□□□□□ -0.71
LIN54-210ENST00000510877 MMP15P51511 669 aa10.59□□□□□ -0.71
LIN54-210ENST00000510877 FXYD4P59646 89 aa10.59□□□□□ -0.71
LIN54-210ENST00000510877 P2RY14Q15391 338 aa10.59□□□□□ -0.71
LIN54-210ENST00000510877 DEFB121Q5J5C9 76 aa10.59□□□□□ -0.71
LIN54-210ENST00000510877 C10orf111Q8N326 155 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms