RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, human

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP188-208	ENST00000491502	RCC1	P18754	421 aa	Predicted RBP	11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	ZBTB25	P24278	435 aa		11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	NPY4R	P50391	375 aa		11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	EDDM3B	P56851	147 aa		11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	MEF2C	Q06413	473 aa	Predicted RBP	11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	CBX3	Q13185	183 aa		11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	ABCA11P	Q4W5N1	156 aa		11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	FAM201A	Q5SY85	155 aa		11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	CD276	Q5ZPR3	534 aa		11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	NLRC3	Q7RTR2	1065 aa		11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	AKAP14	Q86UN6	197 aa		11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	SLC25A42	Q86VD7	318 aa		11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	FAM185A	Q8N0U4	392 aa		11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	SPIC	Q8N5J4	248 aa		11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	CCDC71L	Q8N9Z2	235 aa		11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	ZNRF1	Q8ND25	227 aa		11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	MARCH1	Q8TCQ1	289 aa		11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	MOB3A	Q96BX8	217 aa		11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	MSI2	Q96DH6	328 aa	Known RBP	11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	SLC25A10	Q9UBX3	287 aa	Predicted RBP	11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	ZNF69	Q9UC07	566 aa		11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	METRN	Q9UJH8	293 aa		11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	CDC42EP3	Q9UKI2	254 aa		11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	KCNS2	Q9ULS6	477 aa		11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	GPR132	Q9UNW8	380 aa		11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	MAB21L2	Q9Y586	359 aa		11.19	□□□□□ -0.62
NUP188-208	ENST00000491502	SON	P18583	2426 aa	Known RBP	11.19	□□□□□ -0.62
NUP188-208	ENST00000491502		A0A0A6YYJ9	748 aa		11.18	□□□□□ -0.62
NUP188-208	ENST00000491502	PIGBOS1	A0A0B4J2F0	54 aa		11.18	□□□□□ -0.62
NUP188-208	ENST00000491502	ADAM20	O43506	726 aa		11.18	□□□□□ -0.62
NUP188-208	ENST00000491502	RGS11	O94810	467 aa		11.18	□□□□□ -0.62
NUP188-208	ENST00000491502	ZNF205	O95201	554 aa		11.18	□□□□□ -0.62
NUP188-208	ENST00000491502	TGFA	P01135	160 aa		11.18	□□□□□ -0.62
NUP188-208	ENST00000491502	SCT	P09683	121 aa		11.18	□□□□□ -0.62
NUP188-208	ENST00000491502	ANXA3	P12429	323 aa		11.18	□□□□□ -0.62
NUP188-208	ENST00000491502	ZNF16	P17020	682 aa	Predicted RBP	11.18	□□□□□ -0.62
NUP188-208	ENST00000491502	NDUFB7	P17568	137 aa		11.18	□□□□□ -0.62
NUP188-208	ENST00000491502	ANXA7	P20073	488 aa	Known RBP	11.18	□□□□□ -0.62
NUP188-208	ENST00000491502	GLIPR1	P48060	266 aa		11.18	□□□□□ -0.62
NUP188-208	ENST00000491502	TMEM155	Q4W5P6	130 aa		11.18	□□□□□ -0.62
NUP188-208	ENST00000491502	TMEM128	Q5BJH2	165 aa		11.18	□□□□□ -0.62
NUP188-208	ENST00000491502	IGSF11	Q5DX21	431 aa		11.18	□□□□□ -0.62
NUP188-208	ENST00000491502	LINC01356	Q8N9X3	169 aa		11.18	□□□□□ -0.62
NUP188-208	ENST00000491502	IL1F10	Q8WWZ1	152 aa		11.18	□□□□□ -0.62
NUP188-208	ENST00000491502	RAB39B	Q96DA2	213 aa		11.18	□□□□□ -0.62
NUP188-208	ENST00000491502	COQ2	Q96H96	371 aa		11.18	□□□□□ -0.62
NUP188-208	ENST00000491502	C1orf159	Q96HA4	380 aa		11.18	□□□□□ -0.62
NUP188-208	ENST00000491502	MIOX	Q9UGB7	285 aa		11.18	□□□□□ -0.62
NUP188-208	ENST00000491502	KCNIP3	Q9Y2W7	256 aa		11.18	□□□□□ -0.62
NUP188-208	ENST00000491502		A0A1W2PPH5	198 aa		11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	OR5H14	A6NHG9	310 aa		11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	SLC22A5	O76082	557 aa		11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	PPY	P01298	95 aa		11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	IFNA2	P01563	188 aa		11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	OR4E1	P0C645	316 aa		11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	RRAS2	P62070	204 aa	Predicted RBP	11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	HTD2	P86397	168 aa		11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	CR1L	Q2VPA4	569 aa		11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	AADACL3	Q5VUY0	350 aa		11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	ZNF660	Q6AZW8	331 aa	Predicted RBP	11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	SGPP2	Q8IWX5	399 aa		11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	CMTM1	Q8IZ96	169 aa		11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	PRR18	Q8N4B5	295 aa		11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	MRGPRD	Q8TDS7	321 aa		11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	ZNF431	Q8TF32	576 aa	Predicted RBP	11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	CORO2A	Q92828	525 aa		11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	ARL11	Q969Q4	196 aa		11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	TMEM246	Q9BRR3	403 aa		11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	BEX2	Q9BXY8	128 aa		11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	GHITM	Q9H3K2	345 aa		11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	GAL3ST2	Q9H3Q3	398 aa		11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	TAS2R3	Q9NYW6	316 aa		11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	VSIG4	Q9Y279	399 aa		11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	UBE2J1	Q9Y385	318 aa	Predicted RBP	11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	OR2W1	Q9Y3N9	320 aa		11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	RBM7	Q9Y580	266 aa	Known RBP	11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	JMJD1C	Q15652	2540 aa		11.17	□□□□□ -0.62
NUP188-208	ENST00000491502	TRBV23-1	A0A0A0MS06	115 aa		11.16	□□□□□ -0.62
NUP188-208	ENST00000491502	ZNF729	A6NN14	1252 aa	Predicted RBP	11.16	□□□□□ -0.62
NUP188-208	ENST00000491502		B4DSR2	109 aa		11.16	□□□□□ -0.62
NUP188-208	ENST00000491502	C12orf77	C9JDV5	145 aa		11.16	□□□□□ -0.62
NUP188-208	ENST00000491502	TUSC2	O75896	110 aa		11.16	□□□□□ -0.62
NUP188-208	ENST00000491502	CCNK	O75909	580 aa		11.16	□□□□□ -0.62
NUP188-208	ENST00000491502	IGHV2-70	P01814	119 aa		11.16	□□□□□ -0.62
NUP188-208	ENST00000491502	HBZ	P02008	142 aa		11.16	□□□□□ -0.62
NUP188-208	ENST00000491502	AKR1C4	P17516	323 aa		11.16	□□□□□ -0.62
NUP188-208	ENST00000491502	HNF1A	P20823	631 aa		11.16	□□□□□ -0.62
NUP188-208	ENST00000491502	AADAC	P22760	399 aa		11.16	□□□□□ -0.62
NUP188-208	ENST00000491502	NFYA	P23511	347 aa	Predicted RBP	11.16	□□□□□ -0.62
NUP188-208	ENST00000491502	CEACAM6	P40199	344 aa		11.16	□□□□□ -0.62
NUP188-208	ENST00000491502	LUM	P51884	338 aa	Predicted RBP	11.16	□□□□□ -0.62
NUP188-208	ENST00000491502	FXYD4	P59646	89 aa		11.16	□□□□□ -0.62
NUP188-208	ENST00000491502	C11orf91	Q3C1V1	193 aa		11.16	□□□□□ -0.62
NUP188-208	ENST00000491502	ZNF626	Q68DY1	528 aa		11.16	□□□□□ -0.62
NUP188-208	ENST00000491502	H1FOO	Q8IZA3	346 aa	Predicted RBP	11.16	□□□□□ -0.62
NUP188-208	ENST00000491502	FAM216B	Q8N7L0	139 aa		11.16	□□□□□ -0.62
NUP188-208	ENST00000491502	OR10A7	Q8NGE5	316 aa		11.16	□□□□□ -0.62
NUP188-208	ENST00000491502	CLDND2	Q8NHS1	167 aa		11.16	□□□□□ -0.62
NUP188-208	ENST00000491502	EDARADD	Q8WWZ3	215 aa		11.16	□□□□□ -0.62
NUP188-208	ENST00000491502	TOMM40L	Q969M1	308 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms