RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 Q6YL49 198 aa15.47■□□□□ 0.07
USP11-205ENST00000467378 MOB1BQ7L9L4 216 aa15.47■□□□□ 0.07
USP11-205ENST00000467378 LHFPL4Q7Z7J7 247 aa15.47■□□□□ 0.07
USP11-205ENST00000467378 PRR18Q8N4B5 295 aa15.47■□□□□ 0.07
USP11-205ENST00000467378 SETD6Q8TBK2 473 aa15.47■□□□□ 0.07
USP11-205ENST00000467378 PHF21AQ96BD5 680 aa15.47■□□□□ 0.07
USP11-205ENST00000467378 S100A16Q96FQ6 103 aaKnown RBP15.47■□□□□ 0.07
USP11-205ENST00000467378 RAB9BQ9NP90 201 aa15.47■□□□□ 0.07
USP11-205ENST00000467378 GFOD1Q9NXC2 390 aa15.47■□□□□ 0.07
USP11-205ENST00000467378 TBL2Q9Y4P3 447 aaKnown RBP15.47■□□□□ 0.07
USP11-205ENST00000467378 IGHV3-43A0A0B4J1X8 118 aa15.46■□□□□ 0.07
USP11-205ENST00000467378 SDCBPO00560 298 aaPredicted RBP15.46■□□□□ 0.07
USP11-205ENST00000467378 EIF4EP06730 217 aaKnown RBP15.46■□□□□ 0.07
USP11-205ENST00000467378 IGHV3-43DP0DP04 118 aa15.46■□□□□ 0.07
USP11-205ENST00000467378 MRPS15P82914 257 aaKnown RBP15.46■□□□□ 0.07
USP11-205ENST00000467378 SRSF4Q08170 494 aaKnown RBP15.46■□□□□ 0.07
USP11-205ENST00000467378 ARFRP1Q13795 201 aa15.46■□□□□ 0.07
USP11-205ENST00000467378 PNLIPRP3Q17RR3 467 aa15.46■□□□□ 0.07
USP11-205ENST00000467378 TMEM30BQ3MIR4 351 aa15.46■□□□□ 0.07
USP11-205ENST00000467378 HACD4Q5VWC8 232 aa15.46■□□□□ 0.07
USP11-205ENST00000467378 MZT2AQ6P582 158 aa15.46■□□□□ 0.07
USP11-205ENST00000467378 BEND2Q8NDZ0 799 aa15.46■□□□□ 0.07
USP11-205ENST00000467378 OR4P4Q8NGL7 312 aa15.46■□□□□ 0.07
USP11-205ENST00000467378 OR9G1Q8NH87 305 aa15.46■□□□□ 0.07
USP11-205ENST00000467378 AP3S1Q92572 193 aa15.46■□□□□ 0.07
USP11-205ENST00000467378 LEAP2Q969E1 77 aa15.46■□□□□ 0.07
USP11-205ENST00000467378 MEGF9Q9H1U4 602 aa15.46■□□□□ 0.07
USP11-205ENST00000467378 MGAT4AQ9UM21 535 aa15.46■□□□□ 0.07
USP11-205ENST00000467378 PSG11Q9UQ72 335 aa15.46■□□□□ 0.07
USP11-205ENST00000467378 FAM96BQ9Y3D0 163 aa15.46■□□□□ 0.07
USP11-205ENST00000467378 TMEM235A6NFC5 223 aa15.45■□□□□ 0.06
USP11-205ENST00000467378 CCDC160A6NGH7 325 aa15.45■□□□□ 0.06
USP11-205ENST00000467378 J3QR06 171 aa15.45■□□□□ 0.06
USP11-205ENST00000467378 XRCC3O43542 346 aa15.45■□□□□ 0.06
USP11-205ENST00000467378 HPGDSO60760 199 aa15.45■□□□□ 0.06
USP11-205ENST00000467378 IGHV3-7P01780 117 aa15.45■□□□□ 0.06
USP11-205ENST00000467378 APOA1P02647 267 aa15.45■□□□□ 0.06
USP11-205ENST00000467378 MELTFP08582 738 aa15.45■□□□□ 0.06
USP11-205ENST00000467378 FCGR3AP08637 254 aa15.45■□□□□ 0.06
USP11-205ENST00000467378 FBP1P09467 338 aa15.45■□□□□ 0.06
USP11-205ENST00000467378 SOX6P35712 828 aa15.45■□□□□ 0.06
USP11-205ENST00000467378 PRRX1P54821 245 aa15.45■□□□□ 0.06
USP11-205ENST00000467378 HTD2P86397 168 aa15.45■□□□□ 0.06
USP11-205ENST00000467378 C1QL4Q86Z23 238 aa15.45■□□□□ 0.06
USP11-205ENST00000467378 IZUMO1Q8IYV9 350 aa15.45■□□□□ 0.06
USP11-205ENST00000467378 DYNAPQ8N1N2 210 aa15.45■□□□□ 0.06
USP11-205ENST00000467378 ZNF596Q8TC21 504 aa15.45■□□□□ 0.06
USP11-205ENST00000467378 MMP27Q9H306 513 aa15.45■□□□□ 0.06
USP11-205ENST00000467378 CCDC59Q9P031 241 aaKnown RBP15.45■□□□□ 0.06
USP11-205ENST00000467378 RSL24D1Q9UHA3 163 aaKnown RBP15.45■□□□□ 0.06
USP11-205ENST00000467378 ZNF701M0R085 212 aaPredicted RBP15.44■□□□□ 0.06
USP11-205ENST00000467378 TOR1AO14656 332 aa15.44■□□□□ 0.06
USP11-205ENST00000467378 ELK1P19419 428 aa15.44■□□□□ 0.06
USP11-205ENST00000467378 HLA-DRB3P79483 266 aa15.44■□□□□ 0.06
USP11-205ENST00000467378 SRSF7Q16629 238 aaKnown RBP eCLIP15.44■□□□□ 0.06
USP11-205ENST00000467378 HLA-DRB5Q30154 266 aa15.44■□□□□ 0.06
USP11-205ENST00000467378 FBLN7Q53RD9 439 aa15.44■□□□□ 0.06
USP11-205ENST00000467378 MINOS1Q5TGZ0 78 aa15.44■□□□□ 0.06
USP11-205ENST00000467378 LDLRAD3Q86YD5 345 aa15.44■□□□□ 0.06
USP11-205ENST00000467378 DTX3Q8N9I9 347 aa15.44■□□□□ 0.06
USP11-205ENST00000467378 OR52L2PQ8NGH6 319 aa15.44■□□□□ 0.06
USP11-205ENST00000467378 ZDHHC16Q969W1 377 aa15.44■□□□□ 0.06
USP11-205ENST00000467378 GALMQ96C23 342 aa15.44■□□□□ 0.06
USP11-205ENST00000467378 MALSU1Q96EH3 234 aa15.44■□□□□ 0.06
USP11-205ENST00000467378 AUNIPQ9H7T9 357 aa15.44■□□□□ 0.06
USP11-205ENST00000467378 OR2S2Q9NQN1 319 aa15.44■□□□□ 0.06
USP11-205ENST00000467378 ZNRD1Q9P1U0 126 aa15.44■□□□□ 0.06
USP11-205ENST00000467378 ZNF230Q9UIE0 474 aaPredicted RBP15.44■□□□□ 0.06
USP11-205ENST00000467378 MINOS1-NBL1R4GNA1 71 aa15.44■□□□□ 0.06
USP11-205ENST00000467378 TRDCB7Z8K6 153 aa15.43■□□□□ 0.06
USP11-205ENST00000467378 M0QZ24 198 aa15.43■□□□□ 0.06
USP11-205ENST00000467378 SSX5O60225 188 aa15.43■□□□□ 0.06
USP11-205ENST00000467378 SCTP09683 121 aa15.43■□□□□ 0.06
USP11-205ENST00000467378 PAX6P26367 422 aa15.43■□□□□ 0.06
USP11-205ENST00000467378 HTR1DP28221 377 aa15.43■□□□□ 0.06
USP11-205ENST00000467378 TALDO1P37837 337 aa15.43■□□□□ 0.06
USP11-205ENST00000467378 GNG10P50151 68 aa15.43■□□□□ 0.06
USP11-205ENST00000467378 PITPNAQ00169 270 aa15.43■□□□□ 0.06
USP11-205ENST00000467378 Q3ZCU0 254 aa15.43■□□□□ 0.06
USP11-205ENST00000467378 MORN2Q502X0 79 aa15.43■□□□□ 0.06
USP11-205ENST00000467378 LINC00311Q8N616 119 aa15.43■□□□□ 0.06
USP11-205ENST00000467378 C8orf31Q8N9H6 132 aa15.43■□□□□ 0.06
USP11-205ENST00000467378 ZNF439Q8NDP4 499 aa15.43■□□□□ 0.06
USP11-205ENST00000467378 NUDCD2Q8WVJ2 157 aa15.43■□□□□ 0.06
USP11-205ENST00000467378 MAFIPQ8WZ33 124 aa15.43■□□□□ 0.06
USP11-205ENST00000467378 MMP28Q9H239 520 aa15.43■□□□□ 0.06
USP11-205ENST00000467378 JPT1Q9UK76 154 aa15.43■□□□□ 0.06
USP11-205ENST00000467378 SMIM31A0A1B0GVY4 71 aa15.42■□□□□ 0.06
USP11-205ENST00000467378 A0A1W2PPE3 182 aa15.42■□□□□ 0.06
USP11-205ENST00000467378 LY6LH3BQJ8 138 aa15.42■□□□□ 0.06
USP11-205ENST00000467378 BUB1B-PAK6H3BSN5 160 aa15.42■□□□□ 0.06
USP11-205ENST00000467378 HOXA3O43365 443 aaPredicted RBP15.42■□□□□ 0.06
USP11-205ENST00000467378 PTHLHP12272 177 aa15.42■□□□□ 0.06
USP11-205ENST00000467378 DTYMKP23919 212 aa15.42■□□□□ 0.06
USP11-205ENST00000467378 IER3P46695 156 aa15.42■□□□□ 0.06
USP11-205ENST00000467378 ZNF134P52741 427 aa15.42■□□□□ 0.06
USP11-205ENST00000467378 TAS2R20P59543 309 aa15.42■□□□□ 0.06
USP11-205ENST00000467378 GNG2P59768 71 aa15.42■□□□□ 0.06
USP11-205ENST00000467378 GNMTQ14749 295 aa15.42■□□□□ 0.06
USP11-205ENST00000467378 SLC9A3R2Q15599 337 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms