RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 PYHIN1Q6K0P9 492 aa13.02□□□□□ -0.33
GPC1-207ENST00000466624 BRD3OSQ6XYD6 125 aa13.02□□□□□ -0.33
GPC1-207ENST00000466624 SNX29P2Q8IUI4 249 aa13.02□□□□□ -0.33
GPC1-207ENST00000466624 PDZD9Q8IXQ8 264 aa13.02□□□□□ -0.33
GPC1-207ENST00000466624 PIP4P2Q8N4L2 257 aa13.02□□□□□ -0.33
GPC1-207ENST00000466624 LINC00311Q8N616 119 aa13.02□□□□□ -0.33
GPC1-207ENST00000466624 OR6Q1Q8NGQ2 317 aa13.02□□□□□ -0.33
GPC1-207ENST00000466624 YPEL2Q96QA6 119 aa13.02□□□□□ -0.33
GPC1-207ENST00000466624 SOSTQ9BQB4 213 aa13.02□□□□□ -0.33
GPC1-207ENST00000466624 ST6GALNAC5Q9BVH7 336 aa13.02□□□□□ -0.33
GPC1-207ENST00000466624 TOLLIPQ9H0E2 274 aa13.02□□□□□ -0.33
GPC1-207ENST00000466624 OR2S2Q9NQN1 319 aa13.02□□□□□ -0.33
GPC1-207ENST00000466624 GNG12Q9UBI6 72 aa13.02□□□□□ -0.33
GPC1-207ENST00000466624 ZNF69Q9UC07 566 aa13.02□□□□□ -0.33
GPC1-207ENST00000466624 PSG11Q9UQ72 335 aa13.02□□□□□ -0.33
GPC1-207ENST00000466624 IGHV3OR16-10A0A075B7F0 116 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 MEIOCA2RUB1 952 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 J3QR06 171 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 TOR1AO14656 332 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 CTDSPLO15194 276 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 ARG1P05089 322 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 CTXN2P0C2S0 81 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 GSTT2P0CG29 244 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 GSTT2BP0CG30 244 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 ZBTB25P24278 435 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 PTBP1P26599 531 aaKnown RBP eCLIP13.01□□□□□ -0.33
GPC1-207ENST00000466624 SAA4P35542 130 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 PRRX1P54821 245 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 HERPUD1Q15011 391 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 HLA-DRB5Q30154 266 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 MORN2Q502X0 79 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 MINOS1Q5TGZ0 78 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 RUSC1-AS1Q66K80 236 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 LINC00299Q6ZSB3 139 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 CCDC190Q86UF4 302 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 LURAP1LQ8IV03 231 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 ZNF439Q8NDP4 499 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 BEST4Q8NFU0 473 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 IL1F10Q8WWZ1 152 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 MAFIPQ8WZ33 124 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 CREB3L1Q96BA8 519 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 ABHD1Q96SE0 405 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 ANXA10Q9UJ72 324 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 MINOS1-NBL1R4GNA1 71 aa13.01□□□□□ -0.33
GPC1-207ENST00000466624 MXRA5Q9NR99 2828 aa13□□□□□ -0.33
GPC1-207ENST00000466624 IGKV1D-8A0A087WSZ0 117 aa13□□□□□ -0.33
GPC1-207ENST00000466624 TRBV6-7A0A0A0MS04 114 aa13□□□□□ -0.33
GPC1-207ENST00000466624 IGHV3-43A0A0B4J1X8 118 aa13□□□□□ -0.33
GPC1-207ENST00000466624 IGKV1-6A0A0C4DH72 117 aa13□□□□□ -0.33
GPC1-207ENST00000466624 FABP12A6NFH5 140 aa13□□□□□ -0.33
GPC1-207ENST00000466624 ITGB1BP1O14713 200 aa13□□□□□ -0.33
GPC1-207ENST00000466624 IGHV3-43DP0DP04 118 aa13□□□□□ -0.33
GPC1-207ENST00000466624 NAT1P18440 290 aa13□□□□□ -0.33
GPC1-207ENST00000466624 ETV6P41212 452 aa13□□□□□ -0.33
GPC1-207ENST00000466624 LGALS4P56470 323 aa13□□□□□ -0.33
GPC1-207ENST00000466624 IL18Q14116 193 aa13□□□□□ -0.33
GPC1-207ENST00000466624 C5orf24Q7Z6I8 188 aa13□□□□□ -0.33
GPC1-207ENST00000466624 GVQW1Q8N7I0 195 aa13□□□□□ -0.33
GPC1-207ENST00000466624 OR52L2PQ8NGH6 319 aa13□□□□□ -0.33
GPC1-207ENST00000466624 OR4P4Q8NGL7 312 aa13□□□□□ -0.33
GPC1-207ENST00000466624 GCDHQ92947 438 aaPredicted RBP13□□□□□ -0.33
GPC1-207ENST00000466624 MMP28Q9H239 520 aa13□□□□□ -0.33
GPC1-207ENST00000466624 PRDM13Q9H4Q3 707 aa13□□□□□ -0.33
GPC1-207ENST00000466624 IFT46Q9NQC8 304 aa13□□□□□ -0.33
GPC1-207ENST00000466624 PTTG2Q9NZH5 202 aa13□□□□□ -0.33
GPC1-207ENST00000466624 AMMECR1Q9Y4X0 333 aaPredicted RBP13□□□□□ -0.33
GPC1-207ENST00000466624 FAM172BPA6NC97 362 aa12.99□□□□□ -0.33
GPC1-207ENST00000466624 GABARAPH6UMI1 98 aa12.99□□□□□ -0.33
GPC1-207ENST00000466624 HTR1DP28221 377 aa12.99□□□□□ -0.33
GPC1-207ENST00000466624 PPP1CCP36873 323 aaKnown RBP12.99□□□□□ -0.33
GPC1-207ENST00000466624 SSBP1Q04837 148 aaKnown RBP12.99□□□□□ -0.33
GPC1-207ENST00000466624 GNMTQ14749 295 aa12.99□□□□□ -0.33
GPC1-207ENST00000466624 UTF1Q5T230 341 aa12.99□□□□□ -0.33
GPC1-207ENST00000466624 SLC25A48Q6ZT89 311 aaKnown RBP12.99□□□□□ -0.33
GPC1-207ENST00000466624 FAM216AQ8WUB2 273 aa12.99□□□□□ -0.33
GPC1-207ENST00000466624 SNAPC3Q92966 411 aa12.99□□□□□ -0.33
GPC1-207ENST00000466624 SLC23A1Q9UHI7 598 aa12.99□□□□□ -0.33
GPC1-207ENST00000466624 A0A0U1RQK1 487 aa12.98□□□□□ -0.33
GPC1-207ENST00000466624 A0A1W2PRD5 423 aa12.98□□□□□ -0.33
GPC1-207ENST00000466624 A0A1W2PRF3 423 aa12.98□□□□□ -0.33
GPC1-207ENST00000466624 A0A1W2PRM7 423 aa12.98□□□□□ -0.33
GPC1-207ENST00000466624 BUB1B-PAK6H3BSN5 160 aa12.98□□□□□ -0.33
GPC1-207ENST00000466624 HSPA12AO43301 675 aa12.98□□□□□ -0.33
GPC1-207ENST00000466624 FBP1P09467 338 aa12.98□□□□□ -0.33
GPC1-207ENST00000466624 RCVRNP35243 200 aa12.98□□□□□ -0.33
GPC1-207ENST00000466624 ACTBP60709 375 aa12.98□□□□□ -0.33
GPC1-207ENST00000466624 ACTG1P63261 375 aa12.98□□□□□ -0.33
GPC1-207ENST00000466624 MADCAM1Q13477 382 aa12.98□□□□□ -0.33
GPC1-207ENST00000466624 IGSF11Q5DX21 431 aa12.98□□□□□ -0.33
GPC1-207ENST00000466624 SPANXN2Q5MJ10 180 aa12.98□□□□□ -0.33
GPC1-207ENST00000466624 FAM131AQ6UXB0 335 aa12.98□□□□□ -0.33
GPC1-207ENST00000466624 BCL6BQ8N143 479 aaPredicted RBP12.98□□□□□ -0.33
GPC1-207ENST00000466624 OR10V1Q8NGI7 309 aa12.98□□□□□ -0.33
GPC1-207ENST00000466624 OR10J5Q8NHC4 309 aa12.98□□□□□ -0.33
GPC1-207ENST00000466624 SMIM4Q8WVI0 70 aa12.98□□□□□ -0.33
GPC1-207ENST00000466624 FCAMRQ8WWV6 532 aa12.98□□□□□ -0.33
GPC1-207ENST00000466624 EDARADDQ8WWZ3 215 aa12.98□□□□□ -0.33
GPC1-207ENST00000466624 LEAP2Q969E1 77 aa12.98□□□□□ -0.33
GPC1-207ENST00000466624 MALSU1Q96EH3 234 aa12.98□□□□□ -0.33
GPC1-207ENST00000466624 AJUBAQ96IF1 538 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 301.1 ms