RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 OR2S2Q9NQN1 319 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 GFOD1Q9NXC2 390 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 KLK11Q9UBX7 282 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 SLC23A1Q9UHI7 598 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 JPT1Q9UK76 154 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 ANAPC10Q9UM13 185 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 ZNF469Q96JG9 3925 aaPredicted RBP8.32□□□□□ -1.08
UPF2-204ENST00000460569 IGHV2-26A0A0B4J1V2 119 aa8.31□□□□□ -1.08
UPF2-204ENST00000460569 IGKV1-6A0A0C4DH72 117 aa8.31□□□□□ -1.08
UPF2-204ENST00000460569 A0A1W2PRD5 423 aa8.31□□□□□ -1.08
UPF2-204ENST00000460569 A0A1W2PRF3 423 aa8.31□□□□□ -1.08
UPF2-204ENST00000460569 A0A1W2PRM7 423 aa8.31□□□□□ -1.08
UPF2-204ENST00000460569 RNASEK-C17orf49H0YIS7 233 aa8.31□□□□□ -1.08
UPF2-204ENST00000460569 GSTZ1O43708 216 aaPredicted RBP8.31□□□□□ -1.08
UPF2-204ENST00000460569 HNF1AP20823 631 aa8.31□□□□□ -1.08
UPF2-204ENST00000460569 HLA-DMAP28067 261 aa8.31□□□□□ -1.08
UPF2-204ENST00000460569 PPP1CCP36873 323 aaKnown RBP8.31□□□□□ -1.08
UPF2-204ENST00000460569 LOXL3P58215 753 aa8.31□□□□□ -1.08
UPF2-204ENST00000460569 TAS2R46P59540 309 aa8.31□□□□□ -1.08
UPF2-204ENST00000460569 IGSF11Q5DX21 431 aa8.31□□□□□ -1.08
UPF2-204ENST00000460569 FAM120AOSQ5T036 256 aa8.31□□□□□ -1.08
UPF2-204ENST00000460569 UTF1Q5T230 341 aa8.31□□□□□ -1.08
UPF2-204ENST00000460569 GPR157Q5UAW9 335 aa8.31□□□□□ -1.08
UPF2-204ENST00000460569 STEAP3Q658P3 488 aa8.31□□□□□ -1.08
UPF2-204ENST00000460569 FAM53AQ6NSI3 398 aaPredicted RBP8.31□□□□□ -1.08
UPF2-204ENST00000460569 C1orf229Q6ZS94 237 aaPredicted RBP8.31□□□□□ -1.08
UPF2-204ENST00000460569 TEX29Q8N6K0 151 aa8.31□□□□□ -1.08
UPF2-204ENST00000460569 TNFRSF14Q92956 283 aa8.31□□□□□ -1.08
UPF2-204ENST00000460569 CLEC7AQ9BXN2 247 aa8.31□□□□□ -1.08
UPF2-204ENST00000460569 OR1A1Q9P1Q5 309 aa8.31□□□□□ -1.08
UPF2-204ENST00000460569 MTFP1Q9UDX5 166 aa8.31□□□□□ -1.08
UPF2-204ENST00000460569 SONP18583 2426 aaKnown RBP8.3□□□□□ -1.08
UPF2-204ENST00000460569 A0A087X0M5 115 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 CENPVL3A0A0U1RRI6 287 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 A0A1B0GX30 115 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 ZNF736B4DX44 427 aaPredicted RBP8.3□□□□□ -1.08
UPF2-204ENST00000460569 RGS11O94810 467 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 DIRAS3O95661 229 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 PMP2P02689 132 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 IGHV4-38-2P0DP08 117 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 NAT1P18440 290 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 ZBTB25P24278 435 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 CD34P28906 385 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 HRH1P35367 487 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 CEACAM6P40199 344 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 OR3A3P47888 321 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 SSBP1Q04837 148 aaKnown RBP8.3□□□□□ -1.08
UPF2-204ENST00000460569 CDK10Q15131 360 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 KLF17Q5JT82 389 aaPredicted RBP8.3□□□□□ -1.08
UPF2-204ENST00000460569 RUSC1-AS1Q66K80 236 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 HCP5Q6MZN7 132 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 ABHD12Q8N2K0 398 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 GDPD1Q8N9F7 314 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 OR5AP2Q8NGF4 316 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 OR5H2Q8NGV7 314 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 OR10J5Q8NHC4 309 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 NANPQ8TBE9 248 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 TRIM63Q969Q1 353 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 THAP7Q9BT49 309 aaPredicted RBP8.3□□□□□ -1.08
UPF2-204ENST00000460569 WDR12Q9GZL7 423 aaKnown RBP8.3□□□□□ -1.08
UPF2-204ENST00000460569 NECAP2Q9NVZ3 263 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 EHFQ9NZC4 300 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 ZNF69Q9UC07 566 aa8.3□□□□□ -1.08
UPF2-204ENST00000460569 RBMX2Q9Y388 322 aaKnown RBP8.3□□□□□ -1.08
UPF2-204ENST00000460569 HIVEP2P31629 2446 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 TRBV6-7A0A0A0MS04 114 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 IGHV1-69DA0A0B4J2H0 117 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 A0A1W2PPE3 182 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 TOR1AO14656 332 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 LANCL1O43813 399 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 YPEL1O60688 119 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 FSHBP01225 129 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 IGHV1-69P01742 117 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 ARG1P05089 322 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 CSF1P09603 554 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 CTXN2P0C2S0 81 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 SRP14P37108 136 aaKnown RBP8.29□□□□□ -1.08
UPF2-204ENST00000460569 UBE2E1P51965 193 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 PRRX1P54821 245 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 TAS2R19P59542 299 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 ZNF846Q147U1 533 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 Q3ZCU0 254 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 MORN2Q502X0 79 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 ACTBL2Q562R1 376 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 RNASE10Q5GAN6 216 aaKnown RBP8.29□□□□□ -1.08
UPF2-204ENST00000460569 TRIQKQ629K1 86 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 ZNF626Q68DY1 528 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 BRD3OSQ6XYD6 125 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 TMEM229BQ8NBD8 167 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 OR2AK2Q8NG84 335 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 OR11H6Q8NGC7 330 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 OR9G1Q8NH87 305 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 EDARADDQ8WWZ3 215 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 YPEL2Q96QA6 119 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 SDHCQ99643 169 aaPredicted RBP8.29□□□□□ -1.08
UPF2-204ENST00000460569 ABHD14AQ9BUJ0 271 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 PARP12Q9H0J9 701 aaKnown RBP8.29□□□□□ -1.08
UPF2-204ENST00000460569 TMEM160Q9NX00 188 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 RDH8Q9NYR8 311 aa8.29□□□□□ -1.08
UPF2-204ENST00000460569 TAS2R8Q9NYW2 309 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms