RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 FOXE3Q13461 319 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 RSU1Q15404 277 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 DEFB136Q30KP8 78 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 ATAD3CQ5T2N8 411 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 ELP2Q6IA86 826 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 SYS1Q8N2H4 156 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 C5orf56Q8N8D9 126 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 CHST4Q8NCG5 386 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 PXT1Q8NFP0 134 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 OR13C5Q8NGS8 318 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 OR10X1Q8NGY0 326 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 RHOXF1Q8NHV9 184 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 HAVCR2Q8TDQ0 301 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 APH1BQ8WW43 257 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 TRIM63Q969Q1 353 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 CREB3L1Q96BA8 519 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 DPCDQ9BVM2 203 aaPredicted RBP3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 RHOFQ9HBH0 211 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 FAM118AQ9NWS6 357 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 CLEC2DQ9UHP7 191 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 ST3GAL6Q9Y274 331 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 MOB4Q9Y3A3 225 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 HSPE1-MOB4S4R3N1 261 aa3.69□□□□□ -1.82
GTF3C3-208ENST00000455546 IGHV1-3A0A0C4DH29 117 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 MAGEA13PA6NCF6 341 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 TMEM212A6NML5 194 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 SNTNA6NMZ2 147 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 OOSP1A8MZH6 123 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 C15orf65H3BRN8 121 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 AP4M1O00189 453 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 CCRL2O00421 344 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 SDCBPO00560 298 aaPredicted RBP3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 SLC31A2O15432 143 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 WBP4O75554 376 aaKnown RBP3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 OR7C1O76099 320 aaPredicted RBP3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 LALBAP00709 142 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 IL1AP01583 271 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 GAPDHP04406 335 aaKnown RBP3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 IL6RP08887 468 aaPredicted RBP3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 ZNF93P35789 620 aaPredicted RBP3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 F2RL1P55085 397 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 RAB25P57735 213 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 TIRAPP58753 221 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 EGFEM1PQ0D2K5 195 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 RAB40BQ12829 278 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 MADCAM1Q13477 382 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 SLC22A6Q4U2R8 563 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 DDI2Q5TDH0 399 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 CCDC144NLQ6NUI1 221 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 MZT2AQ6P582 158 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 ASCL4Q6XD76 172 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 OR2W3Q7Z3T1 314 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 SLC35E3Q7Z769 313 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 STPG2Q8N412 459 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 ZFP41Q8N8Y5 198 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 Q8N9W7 124 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 KLHL30-AS1Q8NEE0 82 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 Q8NFD4 153 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 OR4K15Q8NH41 348 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 OR52N1Q8NH53 320 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 NEK7Q8TDX7 302 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 CHPT1Q8WUD6 406 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 ARL11Q969Q4 196 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 TMEM106AQ96A25 262 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 MRPL48Q96GC5 212 aaKnown RBP3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 RITA1Q96K30 269 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 Q96MT0 163 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 METTL9Q9H1A3 318 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 BANF2Q9H503 90 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 DCLRE1BQ9H816 532 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 SEPSECSQ9HD40 501 aaKnown RBP3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 PLSCR3Q9NRY6 295 aa3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 RPL36Q9Y3U8 105 aaKnown RBP3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 AMMECR1Q9Y4X0 333 aaPredicted RBP3.68□□□□□ -1.82
GTF3C3-208ENST00000455546 TNCP24821 2201 aa3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 TRAV8-7A0A075B6U6 113 aa3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 PNMA8CA0A1B0GUJ8 204 aa3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 HMX3A6NHT5 357 aa3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 M0QZK8 103 aa3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 AIPO00170 330 aa3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 CCL24O00175 119 aa3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 HSD17B6O14756 317 aa3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 OGG1O15527 345 aa3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 MPZL2O60487 215 aa3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 ACTL6BO94805 426 aa3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 DUS4LO95620 317 aaKnown RBP3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 BAG2O95816 211 aa3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 IGHG2P01859 326 aa3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 MT-ND4P03905 459 aa3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 MAS1P04201 325 aa3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 RCC1P18754 421 aaPredicted RBP3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 GZMHP20718 246 aa3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 BDKRB2P30411 391 aa3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 MYCNOSP40205 109 aa3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 RAB7AP51149 207 aa3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 LUMP51884 338 aaPredicted RBP3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 RBM11P57052 281 aaKnown RBP3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 EBI3Q14213 229 aa3.67□□□□□ -1.82
GTF3C3-208ENST00000455546 IL13RA2Q14627 380 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms