RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 CRTAPO75718 401 aaPredicted RBP13.39□□□□□ -0.27
CPSF4-203ENST00000430038 CD1AP06126 327 aa13.39□□□□□ -0.27
CPSF4-203ENST00000430038 FUT3P21217 361 aa13.39□□□□□ -0.27
CPSF4-203ENST00000430038 CNTFRP26992 372 aa13.39□□□□□ -0.27
CPSF4-203ENST00000430038 DEFB121Q5J5C9 76 aa13.39□□□□□ -0.27
CPSF4-203ENST00000430038 C6orf141Q5SZD1 244 aa13.39□□□□□ -0.27
CPSF4-203ENST00000430038 LRRTM1Q86UE6 522 aa13.39□□□□□ -0.27
CPSF4-203ENST00000430038 CDH26Q8IXH8 852 aa13.39□□□□□ -0.27
CPSF4-203ENST00000430038 C8orf59Q8N0T1 100 aaPredicted RBP13.39□□□□□ -0.27
CPSF4-203ENST00000430038 ZFP57Q9NU63 452 aa13.39□□□□□ -0.27
CPSF4-203ENST00000430038 GNG12Q9UBI6 72 aa13.39□□□□□ -0.27
CPSF4-203ENST00000430038 CASQ2O14958 399 aaPredicted RBP13.38□□□□□ -0.27
CPSF4-203ENST00000430038 PPP1CCP36873 323 aaKnown RBP13.38□□□□□ -0.27
CPSF4-203ENST00000430038 MYCNOSP40205 109 aa13.38□□□□□ -0.27
CPSF4-203ENST00000430038 Q3ZCU0 254 aa13.38□□□□□ -0.27
CPSF4-203ENST00000430038 ZNF695Q8IW36 515 aa13.38□□□□□ -0.27
CPSF4-203ENST00000430038 FOXRED2Q8IWF2 684 aa13.38□□□□□ -0.27
CPSF4-203ENST00000430038 STX19Q8N4C7 294 aa13.38□□□□□ -0.27
CPSF4-203ENST00000430038 TFAP2CQ92754 450 aa13.38□□□□□ -0.27
CPSF4-203ENST00000430038 SULT4A1Q9BR01 284 aa13.38□□□□□ -0.27
CPSF4-203ENST00000430038 SPACA1Q9HBV2 294 aa13.38□□□□□ -0.27
CPSF4-203ENST00000430038 LSM2Q9Y333 95 aaKnown RBP13.38□□□□□ -0.27
CPSF4-203ENST00000430038 FAM90A10PA6NDY2 464 aa13.37□□□□□ -0.27
CPSF4-203ENST00000430038 FAM90A7PA6NKC0 464 aa13.37□□□□□ -0.27
CPSF4-203ENST00000430038 NUDT19A8MXV4 375 aa13.37□□□□□ -0.27
CPSF4-203ENST00000430038 FAM90A23PA8MXZ1 464 aa13.37□□□□□ -0.27
CPSF4-203ENST00000430038 H0YHG0 523 aa13.37□□□□□ -0.27
CPSF4-203ENST00000430038 AP4M1O00189 453 aa13.37□□□□□ -0.27
CPSF4-203ENST00000430038 SPINT2O43291 252 aa13.37□□□□□ -0.27
CPSF4-203ENST00000430038 DUS4LO95620 317 aaKnown RBP13.37□□□□□ -0.27
CPSF4-203ENST00000430038 VSIG8P0DPA2 414 aa13.37□□□□□ -0.27
CPSF4-203ENST00000430038 SNRPBP14678 240 aaKnown RBP13.37□□□□□ -0.27
CPSF4-203ENST00000430038 HTR2CP28335 458 aa13.37□□□□□ -0.27
CPSF4-203ENST00000430038 TAS2R43P59537 309 aa13.37□□□□□ -0.27
CPSF4-203ENST00000430038 MED21Q13503 144 aa13.37□□□□□ -0.27
CPSF4-203ENST00000430038 KIAA0141Q14154 515 aaPredicted RBP13.37□□□□□ -0.27
CPSF4-203ENST00000430038 PNLIPRP3Q17RR3 467 aa13.37□□□□□ -0.27
CPSF4-203ENST00000430038 ACSM3Q53FZ2 586 aa13.37□□□□□ -0.27
CPSF4-203ENST00000430038 TEX38Q6PEX7 206 aa13.37□□□□□ -0.27
CPSF4-203ENST00000430038 RNF152Q8N8N0 203 aa13.37□□□□□ -0.27
CPSF4-203ENST00000430038 OR51D1Q8NGF3 324 aa13.37□□□□□ -0.27
CPSF4-203ENST00000430038 NICN1Q9BSH3 213 aa13.37□□□□□ -0.27
CPSF4-203ENST00000430038 OR2S2Q9NQN1 319 aa13.37□□□□□ -0.27
CPSF4-203ENST00000430038 NKX1-2Q9UD57 310 aaPredicted RBP13.37□□□□□ -0.27
CPSF4-203ENST00000430038 CCL24O00175 119 aa13.36□□□□□ -0.27
CPSF4-203ENST00000430038 PDCD6O75340 191 aa13.36□□□□□ -0.27
CPSF4-203ENST00000430038 CD37P11049 281 aa13.36□□□□□ -0.27
CPSF4-203ENST00000430038 SLC2A2P11168 524 aaPredicted RBP13.36□□□□□ -0.27
CPSF4-203ENST00000430038 CHATP28329 748 aa13.36□□□□□ -0.27
CPSF4-203ENST00000430038 OR3A3P47888 321 aa13.36□□□□□ -0.27
CPSF4-203ENST00000430038 SLC35B1P78383 322 aa13.36□□□□□ -0.27
CPSF4-203ENST00000430038 QRFPP83859 136 aa13.36□□□□□ -0.27
CPSF4-203ENST00000430038 UNC119Q13432 240 aa13.36□□□□□ -0.27
CPSF4-203ENST00000430038 LSAMPQ13449 338 aa13.36□□□□□ -0.27
CPSF4-203ENST00000430038 GPR50Q13585 617 aa13.36□□□□□ -0.27
CPSF4-203ENST00000430038 C6orf183Q5T699 404 aa13.36□□□□□ -0.27
CPSF4-203ENST00000430038 C6orf201Q7Z4U5 140 aa13.36□□□□□ -0.27
CPSF4-203ENST00000430038 GFI1Q99684 422 aa13.36□□□□□ -0.27
CPSF4-203ENST00000430038 RASL11BQ9BPW5 248 aa13.36□□□□□ -0.27
CPSF4-203ENST00000430038 UQCC2Q9BRT2 126 aa13.36□□□□□ -0.27
CPSF4-203ENST00000430038 FAAP24Q9BTP7 215 aa13.36□□□□□ -0.27
CPSF4-203ENST00000430038 MRPL20Q9BYC9 149 aaKnown RBP13.36□□□□□ -0.27
CPSF4-203ENST00000430038 C8orf4Q9NR00 106 aa13.36□□□□□ -0.27
CPSF4-203ENST00000430038 A0A0A6YYD4 124 aa13.35□□□□□ -0.27
CPSF4-203ENST00000430038 MYL12BO14950 172 aa13.35□□□□□ -0.27
CPSF4-203ENST00000430038 LANCL1O43813 399 aa13.35□□□□□ -0.27
CPSF4-203ENST00000430038 GLAP06280 429 aa13.35□□□□□ -0.27
CPSF4-203ENST00000430038 CDK1P06493 297 aa13.35□□□□□ -0.27
CPSF4-203ENST00000430038 IL3RAP26951 378 aa13.35□□□□□ -0.27
CPSF4-203ENST00000430038 NKAPLQ5M9Q1 402 aa13.35□□□□□ -0.27
CPSF4-203ENST00000430038 C1orf100Q5SVJ3 147 aa13.35□□□□□ -0.27
CPSF4-203ENST00000430038 COMMD1Q8N668 190 aa13.35□□□□□ -0.27
CPSF4-203ENST00000430038 NABP2Q9BQ15 211 aa13.35□□□□□ -0.27
CPSF4-203ENST00000430038 PARP12Q9H0J9 701 aaKnown RBP13.35□□□□□ -0.27
CPSF4-203ENST00000430038 KLK15Q9H2R5 256 aa13.35□□□□□ -0.27
CPSF4-203ENST00000430038 ZNF107Q9UII5 783 aaPredicted RBP13.35□□□□□ -0.27
CPSF4-203ENST00000430038 RYR3Q15413 4870 aa13.34□□□□□ -0.27
CPSF4-203ENST00000430038 PTGES3LE9PB15 166 aa13.34□□□□□ -0.27
CPSF4-203ENST00000430038 G3V318 75 aa13.34□□□□□ -0.27
CPSF4-203ENST00000430038 CA11O75493 328 aa13.34□□□□□ -0.27
CPSF4-203ENST00000430038 IGHG4P01861 327 aa13.34□□□□□ -0.27
CPSF4-203ENST00000430038 MYF6P23409 242 aa13.34□□□□□ -0.27
CPSF4-203ENST00000430038 PSMB8P28062 276 aa13.34□□□□□ -0.27
CPSF4-203ENST00000430038 PPIFP30405 207 aaKnown RBP13.34□□□□□ -0.27
CPSF4-203ENST00000430038 SOX6P35712 828 aa13.34□□□□□ -0.27
CPSF4-203ENST00000430038 CDX1P47902 265 aaPredicted RBP13.34□□□□□ -0.27
CPSF4-203ENST00000430038 LUMP51884 338 aaPredicted RBP13.34□□□□□ -0.27
CPSF4-203ENST00000430038 GABPB1Q06547 395 aaPredicted RBP13.34□□□□□ -0.27
CPSF4-203ENST00000430038 FOXE3Q13461 319 aa13.34□□□□□ -0.27
CPSF4-203ENST00000430038 KIR2DS1Q14954 304 aa13.34□□□□□ -0.27
CPSF4-203ENST00000430038 STEAP3Q658P3 488 aa13.34□□□□□ -0.27
CPSF4-203ENST00000430038 KCTD7Q96MP8 289 aa13.34□□□□□ -0.27
CPSF4-203ENST00000430038 ZNF251Q9BRH9 671 aa13.34□□□□□ -0.27
CPSF4-203ENST00000430038 TMED9Q9BVK6 235 aa13.34□□□□□ -0.27
CPSF4-203ENST00000430038 YPEL1O60688 119 aa13.33□□□□□ -0.28
CPSF4-203ENST00000430038 IGF1P05019 195 aa13.33□□□□□ -0.28
CPSF4-203ENST00000430038 RPS27AP62979 156 aaKnown RBP13.33□□□□□ -0.28
CPSF4-203ENST00000430038 HTD2P86397 168 aa13.33□□□□□ -0.28
CPSF4-203ENST00000430038 IRF3Q14653 427 aa13.33□□□□□ -0.28
CPSF4-203ENST00000430038 HMGN3Q15651 99 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms