RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 VAMP2P63027 116 aa11.6□□□□□ -0.55
CDCA3-202ENST00000422785 SWI5Q1ZZU3 235 aa11.6□□□□□ -0.55
CDCA3-202ENST00000422785 C10orf91Q5T1B1 145 aa11.6□□□□□ -0.55
CDCA3-202ENST00000422785 LYPD6BQ8NI32 183 aa11.6□□□□□ -0.55
CDCA3-202ENST00000422785 UBALD1Q8TB05 177 aa11.6□□□□□ -0.55
CDCA3-202ENST00000422785 UFSP2Q9NUQ7 469 aa11.6□□□□□ -0.55
CDCA3-202ENST00000422785 RBM7Q9Y580 266 aaKnown RBP11.6□□□□□ -0.55
CDCA3-202ENST00000422785 IFNL4K9M1U5 179 aa11.6□□□□□ -0.55
CDCA3-202ENST00000422785 PITX3O75364 302 aa11.6□□□□□ -0.55
CDCA3-202ENST00000422785 OR8U9P0C7N5 309 aa11.6□□□□□ -0.55
CDCA3-202ENST00000422785 DANCRP0C864 163 aa11.6□□□□□ -0.55
CDCA3-202ENST00000422785 ARHGDIBP52566 201 aa11.6□□□□□ -0.55
CDCA3-202ENST00000422785 SMIM21Q3B7S5 101 aa11.6□□□□□ -0.55
CDCA3-202ENST00000422785 Q6ZRG5 221 aa11.6□□□□□ -0.55
CDCA3-202ENST00000422785 RPRMLQ8N4K4 120 aa11.6□□□□□ -0.55
CDCA3-202ENST00000422785 OR8U1Q8NH10 309 aa11.6□□□□□ -0.55
CDCA3-202ENST00000422785 S100PBPQ96BU1 408 aa11.6□□□□□ -0.55
CDCA3-202ENST00000422785 PARP12Q9H0J9 701 aaKnown RBP11.6□□□□□ -0.55
CDCA3-202ENST00000422785 TREM1Q9NP99 234 aa11.6□□□□□ -0.55
CDCA3-202ENST00000422785 PPP1R3CQ9UQK1 317 aa11.6□□□□□ -0.55
CDCA3-202ENST00000422785 OOEPA6NGQ2 149 aa11.59□□□□□ -0.55
CDCA3-202ENST00000422785 PROB1E7EW31 1015 aa11.59□□□□□ -0.55
CDCA3-202ENST00000422785 NDUFA2O43678 99 aa11.59□□□□□ -0.55
CDCA3-202ENST00000422785 PTBP3O95758 552 aaKnown RBP11.59□□□□□ -0.55
CDCA3-202ENST00000422785 ADCYAP1P18509 176 aa11.59□□□□□ -0.55
CDCA3-202ENST00000422785 KRTCAP3Q53RY4 240 aa11.59□□□□□ -0.55
CDCA3-202ENST00000422785 TMEM252Q8N6L7 170 aa11.59□□□□□ -0.55
CDCA3-202ENST00000422785 LSM10Q969L4 123 aaKnown RBP11.59□□□□□ -0.55
CDCA3-202ENST00000422785 GALMQ96C23 342 aa11.59□□□□□ -0.55
CDCA3-202ENST00000422785 GPR146Q96CH1 333 aa11.59□□□□□ -0.55
CDCA3-202ENST00000422785 LIN7CQ9NUP9 197 aaKnown RBP11.59□□□□□ -0.55
CDCA3-202ENST00000422785 UQCC1Q9NVA1 299 aa11.59□□□□□ -0.55
CDCA3-202ENST00000422785 KCNS2Q9ULS6 477 aa11.59□□□□□ -0.55
CDCA3-202ENST00000422785 RNF115Q9Y4L5 304 aa11.59□□□□□ -0.55
CDCA3-202ENST00000422785 SPENQ96T58 3664 aaKnown RBP11.59□□□□□ -0.55
CDCA3-202ENST00000422785 A0A0G2JRQ6 117 aa11.59□□□□□ -0.55
CDCA3-202ENST00000422785 C12orf77C9JDV5 145 aa11.59□□□□□ -0.55
CDCA3-202ENST00000422785 ZNF83P51522 516 aa11.59□□□□□ -0.55
CDCA3-202ENST00000422785 AESQ08117 197 aa11.59□□□□□ -0.55
CDCA3-202ENST00000422785 ZNF266Q14584 549 aa11.59□□□□□ -0.55
CDCA3-202ENST00000422785 ZNF273Q14593 569 aa11.59□□□□□ -0.55
CDCA3-202ENST00000422785 C3orf36Q3SXR2 165 aa11.59□□□□□ -0.55
CDCA3-202ENST00000422785 ZNF600Q6ZNG1 722 aa11.59□□□□□ -0.55
CDCA3-202ENST00000422785 SPAG16Q8N0X2 631 aa11.59□□□□□ -0.55
CDCA3-202ENST00000422785 TSNAXQ99598 290 aaKnown RBP11.59□□□□□ -0.55
CDCA3-202ENST00000422785 NKX6-2Q9C056 277 aaPredicted RBP11.59□□□□□ -0.55
CDCA3-202ENST00000422785 CHST1O43916 411 aa11.58□□□□□ -0.56
CDCA3-202ENST00000422785 TMEM50AO95807 157 aa11.58□□□□□ -0.56
CDCA3-202ENST00000422785 IGKV1-39P01597 117 aa11.58□□□□□ -0.56
CDCA3-202ENST00000422785 IGKV1D-39P04432 117 aa11.58□□□□□ -0.56
CDCA3-202ENST00000422785 CD200P41217 278 aa11.58□□□□□ -0.56
CDCA3-202ENST00000422785 OR3A1P47881 315 aa11.58□□□□□ -0.56
CDCA3-202ENST00000422785 RAB5CP51148 216 aa11.58□□□□□ -0.56
CDCA3-202ENST00000422785 HOXA4Q00056 320 aaPredicted RBP11.58□□□□□ -0.56
CDCA3-202ENST00000422785 LURAP1LQ8IV03 231 aa11.58□□□□□ -0.56
CDCA3-202ENST00000422785 SVBPQ8N300 66 aa11.58□□□□□ -0.56
CDCA3-202ENST00000422785 DRAM1Q8N682 238 aa11.58□□□□□ -0.56
CDCA3-202ENST00000422785 OR1L1Q8NH94 360 aa11.58□□□□□ -0.56
CDCA3-202ENST00000422785 COQ2Q96H96 371 aa11.58□□□□□ -0.56
CDCA3-202ENST00000422785 SFXN3Q9BWM7 321 aa11.58□□□□□ -0.56
CDCA3-202ENST00000422785 CARHSP1Q9Y2V2 147 aaKnown RBP11.58□□□□□ -0.56
CDCA3-202ENST00000422785 GVINP1Q7Z2Y8 2422 aa11.58□□□□□ -0.56
CDCA3-202ENST00000422785 F8W036 122 aa11.58□□□□□ -0.56
CDCA3-202ENST00000422785 WRBO00258 174 aa11.58□□□□□ -0.56
CDCA3-202ENST00000422785 MUC1P15941 1255 aaPredicted RBP11.58□□□□□ -0.56
CDCA3-202ENST00000422785 BAXQ07812 192 aa11.58□□□□□ -0.56
CDCA3-202ENST00000422785 SEC11CQ9BY50 192 aa11.58□□□□□ -0.56
CDCA3-202ENST00000422785 TOLLIPQ9H0E2 274 aa11.58□□□□□ -0.56
CDCA3-202ENST00000422785 SAV1Q9H4B6 383 aaPredicted RBP11.58□□□□□ -0.56
CDCA3-202ENST00000422785 TMEM231Q9H6L2 316 aa11.58□□□□□ -0.56
CDCA3-202ENST00000422785 LUZP4Q9P127 313 aa11.58□□□□□ -0.56
CDCA3-202ENST00000422785 HEATR1Q9H583 2144 aaKnown RBP11.58□□□□□ -0.56
CDCA3-202ENST00000422785 M0R1B8 84 aa11.57□□□□□ -0.56
CDCA3-202ENST00000422785 CEACAM8P31997 349 aaPredicted RBP11.57□□□□□ -0.56
CDCA3-202ENST00000422785 ASCL1P50553 236 aa11.57□□□□□ -0.56
CDCA3-202ENST00000422785 COL10A1Q03692 680 aa11.57□□□□□ -0.56
CDCA3-202ENST00000422785 MSMPQ1L6U9 139 aa11.57□□□□□ -0.56
CDCA3-202ENST00000422785 HSD17B11Q8NBQ5 300 aa11.57□□□□□ -0.56
CDCA3-202ENST00000422785 ZBTB34Q8NCN2 500 aa11.57□□□□□ -0.56
CDCA3-202ENST00000422785 OR2Z1Q8NG97 314 aa11.57□□□□□ -0.56
CDCA3-202ENST00000422785 LRRC29Q8WV35 223 aa11.57□□□□□ -0.56
CDCA3-202ENST00000422785 SH3BGRL3Q9H299 93 aa11.57□□□□□ -0.56
CDCA3-202ENST00000422785 CACFD1Q9UGQ2 172 aa11.57□□□□□ -0.56
CDCA3-202ENST00000422785 FAM96BQ9Y3D0 163 aa11.57□□□□□ -0.56
CDCA3-202ENST00000422785 RNF212BA8MTL3 300 aa11.57□□□□□ -0.56
CDCA3-202ENST00000422785 KIAA1324LA8MWY0 1029 aaPredicted RBP11.57□□□□□ -0.56
CDCA3-202ENST00000422785 RNASEK-C17orf49H0YIS7 233 aa11.57□□□□□ -0.56
CDCA3-202ENST00000422785 CD5P06127 495 aa11.57□□□□□ -0.56
CDCA3-202ENST00000422785 EPHA1P21709 976 aa11.57□□□□□ -0.56
CDCA3-202ENST00000422785 IL2RGP31785 369 aa11.57□□□□□ -0.56
CDCA3-202ENST00000422785 ID4P47928 161 aa11.57□□□□□ -0.56
CDCA3-202ENST00000422785 CLINT1Q14677 625 aa11.57□□□□□ -0.56
CDCA3-202ENST00000422785 ZNF585BQ52M93 769 aa11.57□□□□□ -0.56
CDCA3-202ENST00000422785 ODF3L1Q8IXM7 274 aa11.57□□□□□ -0.56
CDCA3-202ENST00000422785 RNASE11Q8TAA1 199 aaKnown RBP11.57□□□□□ -0.56
CDCA3-202ENST00000422785 FAM57AQ8TBR7 257 aa11.57□□□□□ -0.56
CDCA3-202ENST00000422785 MUCL1Q96DR8 90 aa11.57□□□□□ -0.56
CDCA3-202ENST00000422785 DUSP13Q9UII6 198 aa11.57□□□□□ -0.56
CDCA3-202ENST00000422785 STRAPQ9Y3F4 350 aaKnown RBP11.57□□□□□ -0.56
CDCA3-202ENST00000422785 MUC6Q6W4X9 2439 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms