RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 ADORA2A-AS1P86434 159 aa16.58■□□□□ 0.25
PDLIM5-205ENST00000380180 C6orf183Q5T699 404 aa16.58■□□□□ 0.25
PDLIM5-205ENST00000380180 SELENOHQ8IZQ5 122 aaKnown RBP16.58■□□□□ 0.25
PDLIM5-205ENST00000380180 FAM222BQ8WU58 562 aa16.58■□□□□ 0.25
PDLIM5-205ENST00000380180 ERGIC1Q969X5 290 aa16.58■□□□□ 0.25
PDLIM5-205ENST00000380180 LURAP1Q96LR2 239 aa16.58■□□□□ 0.25
PDLIM5-205ENST00000380180 DCTN5Q9BTE1 182 aa16.58■□□□□ 0.25
PDLIM5-205ENST00000380180 GSX2Q9BZM3 304 aa16.58■□□□□ 0.25
PDLIM5-205ENST00000380180 PPP1R3CQ9UQK1 317 aa16.58■□□□□ 0.25
PDLIM5-205ENST00000380180 RPS10-NUDT3A0A1W2PQS6 291 aa16.58■□□□□ 0.24
PDLIM5-205ENST00000380180 MEX3AA1L020 520 aaKnown RBP16.58■□□□□ 0.24
PDLIM5-205ENST00000380180 ADH4P08319 380 aa16.58■□□□□ 0.24
PDLIM5-205ENST00000380180 UCP1P25874 307 aa16.58■□□□□ 0.24
PDLIM5-205ENST00000380180 SSTR5P35346 364 aa16.58■□□□□ 0.24
PDLIM5-205ENST00000380180 FAM53AQ6NSI3 398 aaPredicted RBP16.58■□□□□ 0.24
PDLIM5-205ENST00000380180 TGIF2LYQ8IUE0 185 aa16.58■□□□□ 0.24
PDLIM5-205ENST00000380180 DMRTC2Q8IXT2 367 aaPredicted RBP16.58■□□□□ 0.24
PDLIM5-205ENST00000380180 OR52L2PQ8NGH6 319 aa16.58■□□□□ 0.24
PDLIM5-205ENST00000380180 OR52M1Q8NGK5 317 aa16.58■□□□□ 0.24
PDLIM5-205ENST00000380180 PPP1R35Q8TAP8 253 aa16.58■□□□□ 0.24
PDLIM5-205ENST00000380180 LINC01560Q8TB33 94 aa16.58■□□□□ 0.24
PDLIM5-205ENST00000380180 RELNP78509 3460 aa16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 MSGN1A6NI15 193 aa16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 VSTM5A8MXK1 200 aa16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 H0Y980 276 aa16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 K7N7A8 449 aa16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 B3GALNT1O75752 331 aa16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 SCGB1D2O95969 90 aa16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 GRNP28799 593 aaKnown RBP16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 CLLU1Q5K131 121 aa16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 Q8TCH9 128 aa16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 RNASE6Q93091 150 aaKnown RBP16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 ARL11Q969Q4 196 aa16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 AKR1E2Q96JD6 320 aa16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 DIRC2Q96SL1 478 aa16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 USF3Q68DE3 2245 aa16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 E7EQL1 145 aa16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 MGST3O14880 152 aa16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 MBPP02686 304 aaPredicted RBP16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 OR51H1Q8NH63 302 aa16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 ST8SIA2Q92186 375 aa16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 NEUROG1Q92886 237 aa16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 ARPC5LQ9BPX5 153 aa16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 NDRG3Q9UGV2 375 aa16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 LSM5Q9Y4Y9 91 aaKnown RBP16.57■□□□□ 0.24
PDLIM5-205ENST00000380180 KALRNO60229 2985 aa16.56■□□□□ 0.24
PDLIM5-205ENST00000380180 DEDDO75618 318 aa16.56■□□□□ 0.24
PDLIM5-205ENST00000380180 CD55P08174 381 aa16.56■□□□□ 0.24
PDLIM5-205ENST00000380180 TNFRSF1AP19438 455 aa16.56■□□□□ 0.24
PDLIM5-205ENST00000380180 NUP62P37198 522 aaPredicted RBP16.56■□□□□ 0.24
PDLIM5-205ENST00000380180 RAB14P61106 215 aa16.56■□□□□ 0.24
PDLIM5-205ENST00000380180 TLE1Q04724 770 aa16.56■□□□□ 0.24
PDLIM5-205ENST00000380180 GNMTQ14749 295 aa16.56■□□□□ 0.24
PDLIM5-205ENST00000380180 CDSNQ15517 529 aa16.56■□□□□ 0.24
PDLIM5-205ENST00000380180 OR5D13Q8NGL4 314 aa16.56■□□□□ 0.24
PDLIM5-205ENST00000380180 RFESDQ8TAC1 157 aa16.56■□□□□ 0.24
PDLIM5-205ENST00000380180 SCARB1Q8WTV0 552 aa16.56■□□□□ 0.24
PDLIM5-205ENST00000380180 FAM210AQ96ND0 272 aa16.56■□□□□ 0.24
PDLIM5-205ENST00000380180 ZNF471Q9BX82 626 aaPredicted RBP16.56■□□□□ 0.24
PDLIM5-205ENST00000380180 KCNS2Q9ULS6 477 aa16.56■□□□□ 0.24
PDLIM5-205ENST00000380180 SMG1Q96Q15 3661 aaKnown RBP16.55■□□□□ 0.24
PDLIM5-205ENST00000380180 ODAMA1E959 279 aa16.55■□□□□ 0.24
PDLIM5-205ENST00000380180 RLN2P04090 185 aa16.55■□□□□ 0.24
PDLIM5-205ENST00000380180 UBA52P62987 128 aaKnown RBP16.55■□□□□ 0.24
PDLIM5-205ENST00000380180 DEFB108BQ8NET1 73 aa16.55■□□□□ 0.24
PDLIM5-205ENST00000380180 RBPMSQ93062 196 aaKnown RBP16.55■□□□□ 0.24
PDLIM5-205ENST00000380180 AQP10Q96PS8 301 aa16.55■□□□□ 0.24
PDLIM5-205ENST00000380180 TOLLIPQ9H0E2 274 aa16.55■□□□□ 0.24
PDLIM5-205ENST00000380180 DCAF16Q9NXF7 216 aa16.55■□□□□ 0.24
PDLIM5-205ENST00000380180 ITPR1Q14643 2758 aa16.55■□□□□ 0.24
PDLIM5-205ENST00000380180 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.55■□□□□ 0.24
PDLIM5-205ENST00000380180 C15orf65H3BRN8 121 aa16.55■□□□□ 0.24
PDLIM5-205ENST00000380180 IRF2P14316 349 aa16.55■□□□□ 0.24
PDLIM5-205ENST00000380180 SMCO1Q147U7 214 aa16.55■□□□□ 0.24
PDLIM5-205ENST00000380180 TRAT1Q6PIZ9 186 aa16.55■□□□□ 0.24
PDLIM5-205ENST00000380180 NINJ1Q92982 152 aa16.55■□□□□ 0.24
PDLIM5-205ENST00000380180 OR2S2Q9NQN1 319 aa16.55■□□□□ 0.24
PDLIM5-205ENST00000380180 LINC00862A6NCI5 91 aa16.54■□□□□ 0.24
PDLIM5-205ENST00000380180 F5H0A9 414 aaPredicted RBP16.54■□□□□ 0.24
PDLIM5-205ENST00000380180 CD3EP07766 207 aa16.54■□□□□ 0.24
PDLIM5-205ENST00000380180 SELLP14151 372 aa16.54■□□□□ 0.24
PDLIM5-205ENST00000380180 PPP1CCP36873 323 aaKnown RBP16.54■□□□□ 0.24
PDLIM5-205ENST00000380180 STUMQ69YW2 141 aa16.54■□□□□ 0.24
PDLIM5-205ENST00000380180 ZNF561Q8N587 486 aa16.54■□□□□ 0.24
PDLIM5-205ENST00000380180 DRAM1Q8N682 238 aa16.54■□□□□ 0.24
PDLIM5-205ENST00000380180 GALNT11Q8NCW6 608 aa16.54■□□□□ 0.24
PDLIM5-205ENST00000380180 RNF150Q9ULK6 438 aa16.54■□□□□ 0.24
PDLIM5-205ENST00000380180 HCFC1P51610 2035 aa16.54■□□□□ 0.24
PDLIM5-205ENST00000380180 YLPM1P49750 1951 aaKnown RBP16.54■□□□□ 0.24
PDLIM5-205ENST00000380180 IGHV3-43A0A0B4J1X8 118 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 K7EPK0 472 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 SPINT2O43291 252 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 WNT2P09544 360 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 IGHV3-43DP0DP04 118 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 GZMHP20718 246 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 EDDM3BP56851 147 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 ESCO2Q56NI9 601 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 FAM71E2Q8N5Q1 922 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 OR4D5Q8NGN0 318 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 SDSLQ96GA7 329 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms