RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 SPTBN2O15020 2390 aa10.27□□□□□ -0.77
DEPDC1-201ENST00000370966 C11orf94C9JXX5 98 aa10.27□□□□□ -0.77
DEPDC1-201ENST00000370966 ARG1P05089 322 aa10.27□□□□□ -0.77
DEPDC1-201ENST00000370966 SLC25A5P05141 298 aaKnown RBP10.27□□□□□ -0.77
DEPDC1-201ENST00000370966 FABP4P15090 132 aa10.27□□□□□ -0.77
DEPDC1-201ENST00000370966 AESQ08117 197 aa10.27□□□□□ -0.77
DEPDC1-201ENST00000370966 MARS2Q96GW9 593 aaKnown RBP10.27□□□□□ -0.77
DEPDC1-201ENST00000370966 FAM103A1Q9BTL3 118 aaKnown RBP10.27□□□□□ -0.77
DEPDC1-201ENST00000370966 NPTNQ9Y639 398 aa10.27□□□□□ -0.77
DEPDC1-201ENST00000370966 A0A0G2JK05 382 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 FAM90A27PA6NNH2 459 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 ASCL5Q7RTU5 278 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 H1FOOQ8IZA3 346 aaPredicted RBP10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 Q96M66 194 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 AQP10Q96PS8 301 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 NRIP2Q9BQI9 281 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 HES7Q9BYE0 225 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 OR5AC2Q9NZP5 309 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 DOCK6Q96HP0 2047 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 LRRC3CA6NJW4 275 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 GATCO43716 136 aaKnown RBP10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 WDR73Q6P4I2 378 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 ZNF488Q96MN9 340 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 ZNF71Q9NQZ8 489 aaPredicted RBP10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 TMEM74BQ9NUR3 256 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 SERTM2A0A1B0GWG4 89 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 PRR33A8MZF0 331 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 TGFBR3LH3BV60 316 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 NPY1RP25929 384 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 PRDX2P32119 198 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 H2BFSP57053 126 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 UBE2L3P68036 154 aaKnown RBP10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 TGIF2LYQ8IUE0 185 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 TGIF2LXQ8IUE1 241 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 OR11H4Q8NGC9 324 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 WIPI2Q9Y4P8 454 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 ZNF318Q5VUA4 2279 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 KRTDAPP60985 99 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 FAM117AQ9C073 453 aa10.26□□□□□ -0.77
DEPDC1-201ENST00000370966 FAM74A7A6NL05 159 aa10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 COX7A1P24310 79 aa10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 G6PCP35575 357 aa10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 LTBRP36941 435 aa10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 NHLH2Q02577 135 aa10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 UBE2V2Q15819 145 aa10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 SNAI3Q3KNW1 292 aa10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 SLC24A4Q8NFF2 622 aa10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 OR10G8Q8NGN5 311 aa10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 ISOC2Q96AB3 205 aa10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 YTHDF2Q9Y5A9 579 aaKnown RBP10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 H3BQ15 152 aa10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 J3QW42 95 aa10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 ERVH48-1M5A8F1 160 aa10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 FCN1O00602 326 aa10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 HIST1H3AP68431 136 aa10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 FAM78BQ5VT40 261 aa10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 CHD5Q8TDI0 1954 aa10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 CACNA1DQ01668 2161 aa10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 ELOA3CA0A087WX78 387 aaPredicted RBP10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 ZNF785A8K8V0 405 aa10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 TIAF1O95411 115 aa10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 CFDP00746 253 aaPredicted RBP10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 MMP7P09237 267 aaPredicted RBP10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 DLK1P80370 383 aa10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 RGP1Q92546 391 aaPredicted RBP10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 FLYWCH2Q96CP2 140 aaKnown RBP10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 NOL4LQ96MY1 436 aaPredicted RBP10.25□□□□□ -0.77
DEPDC1-201ENST00000370966 PDE6DO43924 150 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 HPRT1P00492 218 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 PPP1CCP36873 323 aaKnown RBP10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 B2MP61769 119 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 Q56UQ5 140 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 MARVELD3Q96A59 401 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 C5orf66Q9H5L9 145 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 ARHGEF17Q96PE2 2063 aaPredicted RBP10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 M0QZ24 198 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 RECKO95980 971 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 SCTP09683 121 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 RCC1P18754 421 aaPredicted RBP10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 UCP3P55916 312 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 LRRC75AQ8NAA5 344 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 OR1L8Q8NGR8 309 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 WNT2BQ93097 391 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 TMEM54Q969K7 222 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 HARBI1Q96MB7 349 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 ZNF658BQ4V348 819 aaPredicted RBP10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 TEPPQ6URK8 271 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 STXBP6Q8NFX7 210 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 OR10A7Q8NGE5 316 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 TUBD1Q9UJT1 453 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 RAB29O14966 203 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 PGA5P0DJD9 388 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 DAOP14920 347 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 TNXAQ16473 311 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 KRTCAP3Q53RY4 240 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 TMEM255AQ5JRV8 349 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 MS4A3Q96HJ5 214 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 DIRC2Q96SL1 478 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 WNT5BQ9H1J7 359 aa10.24□□□□□ -0.77
DEPDC1-201ENST00000370966 A0A0G2JMZ2 1700 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 1534.1 ms