RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 MFSD8Q8NHS3 518 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 TRNT1Q96Q11 434 aaKnown RBP3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 WFDC6Q9BQY6 131 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 C20orf27Q9GZN8 174 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 EXD2Q9NVH0 621 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 MED29Q9NX70 200 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 TAAR3PQ9P1P4 343 aa3.81□□□□□ -1.8
RNU4-39P-201ENST00000362455 A0A0G2JMP0 313 aa3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 A0A0X1KG70 313 aa3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 MDFIC2A0A1B0GVS7 189 aa3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 ZNF99A8MXY4 864 aaPredicted RBP3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 LRRN3E7EW58 273 aa3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 J3QLI3 93 aa3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 COPEO14579 308 aa3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 ALDOBP05062 364 aa3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 SERPINA5P05154 406 aa3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 ERCC1P07992 297 aaPredicted RBP3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 CD79AP11912 226 aa3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 ZNF250P15622 560 aa3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 GRPRP30550 384 aa3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 PRRX1P54821 245 aa3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 CNIH2Q6PI25 160 aa3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 LHFPL3Q86UP9 236 aa3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 MS4A15Q8N5U1 240 aa3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 OR4M2Q8NGB6 313 aa3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 OR52P1PQ8NH57 321 aa3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 TESCQ96BS2 214 aa3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 PPP1R36Q96LQ0 422 aa3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 CCDC115Q96NT0 180 aa3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 RARRES2Q99969 163 aa3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 KCTD14Q9BQ13 255 aaPredicted RBP3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 TAPBPLQ9BX59 468 aa3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 XCL2Q9UBD3 114 aa3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 MARCOQ9UEW3 520 aaPredicted RBP3.8□□□□□ -1.8
RNU4-39P-201ENST00000362455 A0A075B6Q4 140 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 A0A087WUJ7 227 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 IGHV1-69-2A0A0G2JMI3 117 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 A0A1B0GWA3 101 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 SMCO3A2RU48 225 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 SMIM23A6NLE4 172 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 CLDN34H7C241 214 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 PPP1R2P9O14990 202 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 TPST1O60507 370 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 SPAG7O75391 227 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 AHSA1O95433 338 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 MOSP00540 346 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 INSP01308 110 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 BGLAPP02818 100 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 DBIP07108 87 aaKnown RBP3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 MPV17P39210 176 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 TFPI2P48307 235 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 SUB1P53999 127 aaKnown RBP eCLIP3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 GLO1Q04760 184 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 BAMBIQ13145 260 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 WHAMMP3Q1A5X7 153 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 TRMT5Q32P41 509 aaKnown RBP3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 ANXA8L1Q5VT79 327 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 C6orf89Q6UWU4 347 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 ACP7Q6ZNF0 438 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 Q6ZSR3 168 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 C10orf111Q8N326 155 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 MYDGFQ969H8 173 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 TMIGD2Q96BF3 282 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 SLC35E1Q96K37 410 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 SH3GL3Q99963 347 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 OR51B6Q9H340 312 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 NTN4Q9HB63 628 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 NEK6Q9HC98 313 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 ZNF443Q9Y2A4 671 aaPredicted RBP3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 DNAH9Q9NYC9 4486 aa3.79□□□□□ -1.8
RNU4-39P-201ENST00000362455 PLPP3O14495 311 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 AIM2O14862 343 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 ZNF861PO60384 105 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 IGHV1-46P01743 117 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 PRB2P02812 416 aaPredicted RBP3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 BPGMP07738 259 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 MMP7P09237 267 aaPredicted RBP3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 OR8G3PP0DMU2 310 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 WNT4P56705 351 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 REG3AQ06141 175 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 CKAP4Q07065 602 aaKnown RBP3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 UNC119Q13432 240 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 C1DQ13901 141 aaKnown RBP3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 LIN52Q52LA3 116 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 LRRC10Q5BKY1 277 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 LCN12Q6JVE5 192 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 C16orf87Q6PH81 154 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 ZNF621Q6ZSS3 439 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 LRRC34Q8IZ02 419 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 ZNF101Q8IZC7 436 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 SLC30A7Q8NEW0 376 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 OR1S2Q8NGQ3 325 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 SYNPRQ8TBG9 265 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 TCP10LQ8TDR4 215 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 GEMIN6Q8WXD5 167 aaKnown RBP3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 CCL17Q92583 94 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 POP5Q969H6 163 aaKnown RBP3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 TMEM54Q969K7 222 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 MAL2Q969L2 176 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms