RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 A0A1B0GU03 582 aa14.02□□□□□ -0.16
SAMM50-201ENST00000350028 RNF212BA8MTL3 300 aa14.02□□□□□ -0.16
SAMM50-201ENST00000350028 SRRM5B3KS81 715 aa14.02□□□□□ -0.16
SAMM50-201ENST00000350028 C12orf77C9JDV5 145 aa14.02□□□□□ -0.16
SAMM50-201ENST00000350028 SCO1O75880 301 aa14.02□□□□□ -0.16
SAMM50-201ENST00000350028 OR8U9P0C7N5 309 aa14.02□□□□□ -0.16
SAMM50-201ENST00000350028 PSG2P11465 335 aa14.02□□□□□ -0.16
SAMM50-201ENST00000350028 IL2RGP31785 369 aa14.02□□□□□ -0.16
SAMM50-201ENST00000350028 POLR2GP62487 172 aaKnown RBP eCLIP14.02□□□□□ -0.16
SAMM50-201ENST00000350028 VAMP2P63027 116 aa14.02□□□□□ -0.16
SAMM50-201ENST00000350028 PAX5Q02548 391 aa14.02□□□□□ -0.16
SAMM50-201ENST00000350028 AESQ08117 197 aa14.02□□□□□ -0.16
SAMM50-201ENST00000350028 TBR1Q16650 682 aa14.02□□□□□ -0.16
SAMM50-201ENST00000350028 IL34Q6ZMJ4 242 aa14.02□□□□□ -0.16
SAMM50-201ENST00000350028 MRGPRGQ86SM5 289 aa14.02□□□□□ -0.16
SAMM50-201ENST00000350028 OR8U1Q8NH10 309 aa14.02□□□□□ -0.16
SAMM50-201ENST00000350028 SUN5Q8TC36 379 aa14.02□□□□□ -0.16
SAMM50-201ENST00000350028 LSM10Q969L4 123 aaKnown RBP14.02□□□□□ -0.16
SAMM50-201ENST00000350028 BSCL2Q96G97 398 aaPredicted RBP14.02□□□□□ -0.16
SAMM50-201ENST00000350028 LURAP1Q96LR2 239 aa14.02□□□□□ -0.16
SAMM50-201ENST00000350028 SLC25A31Q9H0C2 315 aa14.02□□□□□ -0.16
SAMM50-201ENST00000350028 MMP26Q9NRE1 261 aa14.02□□□□□ -0.16
SAMM50-201ENST00000350028 KCNS2Q9ULS6 477 aa14.02□□□□□ -0.16
SAMM50-201ENST00000350028 PPP1R3CQ9UQK1 317 aa14.02□□□□□ -0.16
SAMM50-201ENST00000350028 BOD1L1Q8NFC6 3051 aa14.02□□□□□ -0.17
SAMM50-201ENST00000350028 IGLV3-9A0A075B6K5 115 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 PRDX2P32119 198 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 EWSR1Q01844 656 aaKnown RBP eCLIP14.01□□□□□ -0.17
SAMM50-201ENST00000350028 MST1LQ2TV78 715 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 CXorf66Q5JRM2 361 aaPredicted RBP14.01□□□□□ -0.17
SAMM50-201ENST00000350028 KRBOX4Q5JUW0 171 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 TRAT1Q6PIZ9 186 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 CISD2Q8N5K1 135 aaKnown RBP14.01□□□□□ -0.17
SAMM50-201ENST00000350028 BPIFCQ8NFQ6 507 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 OR1L1Q8NH94 360 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 UBALD1Q8TB05 177 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 GPR146Q96CH1 333 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 GINS3Q9BRX5 216 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 WFDC1Q9HC57 220 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 LIN7CQ9NUP9 197 aaKnown RBP14.01□□□□□ -0.17
SAMM50-201ENST00000350028 SPENQ96T58 3664 aaKnown RBP14.01□□□□□ -0.17
SAMM50-201ENST00000350028 ZSCAN5BA6NJL1 495 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 K7ENP7 123 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 PITX3O75364 302 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 HBZP02008 142 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 SEC11BP0C7V7 166 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 GABRA2P47869 451 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 SELENOVP59797 346 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 NHLH2Q02577 135 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 FAM27E3Q08E93 113 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 MSMO1Q15800 293 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 CLEC9AQ6UXN8 241 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 CD177Q8N6Q3 437 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 TMEM171Q8WVE6 324 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 MEGF10Q96KG7 1140 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 ELOVL5Q9NYP7 299 aa14.01□□□□□ -0.17
SAMM50-201ENST00000350028 SVILO95425 2214 aa14□□□□□ -0.17
SAMM50-201ENST00000350028 FAM24AA6NFZ4 105 aa14□□□□□ -0.17
SAMM50-201ENST00000350028 WRBO00258 174 aa14□□□□□ -0.17
SAMM50-201ENST00000350028 FBXO24O75426 580 aa14□□□□□ -0.17
SAMM50-201ENST00000350028 BMP5P22003 454 aa14□□□□□ -0.17
SAMM50-201ENST00000350028 PJVKQ0ZLH3 352 aa14□□□□□ -0.17
SAMM50-201ENST00000350028 DRAM1Q8N682 238 aa14□□□□□ -0.17
SAMM50-201ENST00000350028 ZNF645Q8N7E2 425 aa14□□□□□ -0.17
SAMM50-201ENST00000350028 Q8NA96 180 aa14□□□□□ -0.17
SAMM50-201ENST00000350028 PPP1R35Q8TAP8 253 aa14□□□□□ -0.17
SAMM50-201ENST00000350028 PARP12Q9H0J9 701 aaKnown RBP14□□□□□ -0.17
SAMM50-201ENST00000350028 FAM212BQ9NTI7 297 aaPredicted RBP14□□□□□ -0.17
SAMM50-201ENST00000350028 LYRM2Q9NU23 88 aaPredicted RBP14□□□□□ -0.17
SAMM50-201ENST00000350028 METRNQ9UJH8 293 aa14□□□□□ -0.17
SAMM50-201ENST00000350028 PRR14LQ5THK1 2151 aa14□□□□□ -0.17
SAMM50-201ENST00000350028 DSPP15924 2871 aaKnown RBP13.99□□□□□ -0.17
SAMM50-201ENST00000350028 A0A0G2JNJ9 132 aa13.99□□□□□ -0.17
SAMM50-201ENST00000350028 B8ZZF3 427 aa13.99□□□□□ -0.17
SAMM50-201ENST00000350028 SSSCA1O60232 199 aa13.99□□□□□ -0.17
SAMM50-201ENST00000350028 MED6O75586 246 aa13.99□□□□□ -0.17
SAMM50-201ENST00000350028 EGR1P18146 543 aa13.99□□□□□ -0.17
SAMM50-201ENST00000350028 PXDC1Q5TGL8 231 aa13.99□□□□□ -0.17
SAMM50-201ENST00000350028 GFRALQ6UXV0 394 aa13.99□□□□□ -0.17
SAMM50-201ENST00000350028 BOLLQ8N9W6 283 aaKnown RBP13.99□□□□□ -0.17
SAMM50-201ENST00000350028 RNASE11Q8TAA1 199 aaKnown RBP13.99□□□□□ -0.17
SAMM50-201ENST00000350028 NINJ1Q92982 152 aa13.99□□□□□ -0.17
SAMM50-201ENST00000350028 PARP11Q9NR21 331 aa13.99□□□□□ -0.17
SAMM50-201ENST00000350028 Q9UFV3 132 aa13.99□□□□□ -0.17
SAMM50-201ENST00000350028 ZNF835Q9Y2P0 537 aa13.99□□□□□ -0.17
SAMM50-201ENST00000350028 ATP6V1G2-DDX39BF2Z307 99 aa13.98□□□□□ -0.17
SAMM50-201ENST00000350028 GLIPR1P48060 266 aa13.98□□□□□ -0.17
SAMM50-201ENST00000350028 CAV2P51636 162 aa13.98□□□□□ -0.17
SAMM50-201ENST00000350028 HOXA4Q00056 320 aaPredicted RBP13.98□□□□□ -0.17
SAMM50-201ENST00000350028 VHLLQ6RSH7 139 aa13.98□□□□□ -0.17
SAMM50-201ENST00000350028 TMEM252Q8N6L7 170 aa13.98□□□□□ -0.17
SAMM50-201ENST00000350028 OR52L2PQ8NGH6 319 aa13.98□□□□□ -0.17
SAMM50-201ENST00000350028 MRGPRDQ8TDS7 321 aa13.98□□□□□ -0.17
SAMM50-201ENST00000350028 SNX22Q96L94 193 aa13.98□□□□□ -0.17
SAMM50-201ENST00000350028 OR2V2Q96R30 315 aa13.98□□□□□ -0.17
SAMM50-201ENST00000350028 MAGT1Q9H0U3 335 aa13.98□□□□□ -0.17
SAMM50-201ENST00000350028 PLA2G2EQ9NZK7 142 aa13.98□□□□□ -0.17
SAMM50-201ENST00000350028 A0A0G2JRQ6 117 aa13.98□□□□□ -0.17
SAMM50-201ENST00000350028 IGSF23A1L1A6 192 aa13.98□□□□□ -0.17
SAMM50-201ENST00000350028 ZNF737O75373 536 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms