RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 C9orf135Q5VTT2 229 aa5.46□□□□□ -1.53
VCAN-203ENST00000343200 MAFAQ8NHW3 353 aaPredicted RBP5.46□□□□□ -1.53
VCAN-203ENST00000343200 PHLDA1Q8WV24 401 aaPredicted RBP5.46□□□□□ -1.53
VCAN-203ENST00000343200 HAPLN2Q9GZV7 340 aa5.46□□□□□ -1.53
VCAN-203ENST00000343200 PTRH2Q9Y3E5 179 aaKnown RBP5.46□□□□□ -1.53
VCAN-203ENST00000343200 A8MWV9 139 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 ISG15P05161 165 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 FGF5P12034 268 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 RCC1P18754 421 aaPredicted RBP5.46□□□□□ -1.54
VCAN-203ENST00000343200 RAE1P78406 368 aaKnown RBP5.46□□□□□ -1.54
VCAN-203ENST00000343200 HOXA4Q00056 320 aaPredicted RBP5.46□□□□□ -1.54
VCAN-203ENST00000343200 GUCA2AQ02747 115 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 LMO3Q8TAP4 145 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 ZNF775Q96BV0 537 aaPredicted RBP5.46□□□□□ -1.54
VCAN-203ENST00000343200 KIR2DL4Q99706 377 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 WDR13Q9H1Z4 485 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 CD46P15529 392 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 KHDC1LQ5JSQ8 128 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 TEPPQ6URK8 271 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 AAED1Q7RTV5 226 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 MRGPRDQ8TDS7 321 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 MRGPRX1Q96LB2 322 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 WNT10AQ9GZT5 417 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 CXorf36Q9H7Y0 433 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 HS3ST2Q9Y278 367 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 KLF12Q9Y4X4 402 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 CDC14BO60729 498 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 SP6Q3SY56 376 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 SPACA5Q96QH8 159 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 ATP6V0BQ99437 205 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 ZPBPQ9BS86 351 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 CPEB1Q9BZB8 566 aaKnown RBP5.46□□□□□ -1.54
VCAN-203ENST00000343200 WSB2Q9NYS7 404 aaPredicted RBP5.46□□□□□ -1.54
VCAN-203ENST00000343200 PHLDA3Q9Y5J5 127 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 TRAV5A0A0B4J249 113 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 KIR2DS5A0A0G2JLQ3 304 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 A0A0G2JNG1 304 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 KIR2DS3K7RE56 304 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 PVRP15151 417 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 ORM2P19652 201 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 PCBP3P57721 371 aaKnown RBP5.46□□□□□ -1.54
VCAN-203ENST00000343200 KIR2DS5Q14953 304 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 TMEM40Q8WWA1 233 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 IRF7Q92985 503 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 DLX4Q92988 240 aaPredicted RBP5.46□□□□□ -1.54
VCAN-203ENST00000343200 ABHD14BQ96IU4 210 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 SYT11Q9BT88 431 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 TRAV9-1A0A075B6T8 112 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 A0A1W2PQM1 296 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 PRKNO60260 465 aaPredicted RBP5.46□□□□□ -1.54
VCAN-203ENST00000343200 GDF9O60383 454 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 S1PR2O95136 353 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 IGHEP01854 428 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 LYZP61626 148 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 DLK2Q6UY11 383 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 HMGCLL1Q8TB92 370 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 SPSB1Q96BD6 273 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 ABHD1Q96SE0 405 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 A0A1W2PP11 408 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 A6NCN8 305 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 LGALS1P09382 135 aaKnown RBP5.46□□□□□ -1.54
VCAN-203ENST00000343200 IFITM1P13164 125 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 GPR183P32249 361 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 RPS20P60866 119 aaKnown RBP5.46□□□□□ -1.54
VCAN-203ENST00000343200 WBP2Q969T9 261 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 MS4A6AQ9H2W1 248 aa5.46□□□□□ -1.54
VCAN-203ENST00000343200 ZNF137PP52743 207 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 PRSS36Q5K4E3 855 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 LINC00596Q86U02 117 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 ARIH2OSQ8N7S6 290 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 RDH5Q92781 318 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 ORAI1Q96D31 301 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 NKX2-8O15522 239 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 SLC25A20O43772 301 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 TSPAN2O60636 221 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 ISXQ2M1V0 245 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 TMEM177Q53S58 311 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 LRRC10Q5BKY1 277 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 C9orf153Q5TBE3 101 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 OVOL2Q9BRP0 275 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 RNF208Q9H0X6 261 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 TLNRD1Q9H1K6 362 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 MYOZ1Q9NP98 299 aaPredicted RBP5.45□□□□□ -1.54
VCAN-203ENST00000343200 H3BUT2 72 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 K7ESF4 209 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 ZFPL1O95159 310 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 VENTXO95231 258 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 SBK3P0C264 359 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 SLC25A26Q70HW3 274 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 TTC9BQ8N6N2 239 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 OR4P4Q8NGL7 312 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 C11orf40Q8WZ69 217 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 NEU1Q99519 415 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 PLSCR2Q9NRY7 297 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 COA3Q9Y2R0 106 aaPredicted RBP5.45□□□□□ -1.54
VCAN-203ENST00000343200 TRAV38-1A0A0B4J264 116 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 A8MXK9 166 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 INHBEP58166 350 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 ANKRD10Q9NXR5 420 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 A0A0G2JLM5 398 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms