RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 GNPNAT1Q96EK6 184 aaPredicted RBP16.89■□□□□ 0.29
CRLF3-201ENST00000324238 TCEAL7Q9BRU2 100 aa16.89■□□□□ 0.29
CRLF3-201ENST00000324238 IFNA5P01569 189 aa16.88■□□□□ 0.29
CRLF3-201ENST00000324238 S100A2P29034 98 aa16.88■□□□□ 0.29
CRLF3-201ENST00000324238 TLE4Q04727 773 aa16.88■□□□□ 0.29
CRLF3-201ENST00000324238 ZNF506Q5JVG8 444 aa16.88■□□□□ 0.29
CRLF3-201ENST00000324238 WDR25Q64LD2 544 aaPredicted RBP16.88■□□□□ 0.29
CRLF3-201ENST00000324238 KDF1Q8NAX2 398 aaPredicted RBP16.88■□□□□ 0.29
CRLF3-201ENST00000324238 PRDM14Q9GZV8 571 aa16.88■□□□□ 0.29
CRLF3-201ENST00000324238 ARRDC1-AS1Q9H2J1 176 aa16.88■□□□□ 0.29
CRLF3-201ENST00000324238 CEBPZOSA8MTT3 80 aa16.88■□□□□ 0.29
CRLF3-201ENST00000324238 CER1O95813 267 aa16.88■□□□□ 0.29
CRLF3-201ENST00000324238 HLA-DRB3P79483 266 aa16.88■□□□□ 0.29
CRLF3-201ENST00000324238 RIPPLY2Q5TAB7 128 aa16.88■□□□□ 0.29
CRLF3-201ENST00000324238 ATP1A1-AS1Q5TC04 95 aa16.88■□□□□ 0.29
CRLF3-201ENST00000324238 ZNF787Q6DD87 383 aa16.88■□□□□ 0.29
CRLF3-201ENST00000324238 HAPLN4Q86UW8 402 aa16.88■□□□□ 0.29
CRLF3-201ENST00000324238 ABHD5Q8WTS1 349 aa16.88■□□□□ 0.29
CRLF3-201ENST00000324238 DCHS1Q96JQ0 3298 aa16.87■□□□□ 0.29
CRLF3-201ENST00000324238 FABP4P15090 132 aa16.87■□□□□ 0.29
CRLF3-201ENST00000324238 GFRA1P56159 465 aa16.87■□□□□ 0.29
CRLF3-201ENST00000324238 FOXO1Q12778 655 aa16.87■□□□□ 0.29
CRLF3-201ENST00000324238 GAR1Q9NY12 217 aaKnown RBP16.87■□□□□ 0.29
CRLF3-201ENST00000324238 TRGC1P0CF51 173 aa16.87■□□□□ 0.29
CRLF3-201ENST00000324238 CDX1P47902 265 aaPredicted RBP16.87■□□□□ 0.29
CRLF3-201ENST00000324238 CEBPDP49716 269 aaPredicted RBP16.87■□□□□ 0.29
CRLF3-201ENST00000324238 ZNF324BQ6AW86 544 aaPredicted RBP16.87■□□□□ 0.29
CRLF3-201ENST00000324238 COLCA1Q6ZS62 124 aa16.87■□□□□ 0.29
CRLF3-201ENST00000324238 PRO1933Q9H354 126 aa16.87■□□□□ 0.29
CRLF3-201ENST00000324238 ZNF391Q9UJN7 358 aa16.87■□□□□ 0.29
CRLF3-201ENST00000324238 OR2W1Q9Y3N9 320 aa16.87■□□□□ 0.29
CRLF3-201ENST00000324238 MGAQ8IWI9 3026 aa16.87■□□□□ 0.29
CRLF3-201ENST00000324238 KIR2DS1A0A191URI9 304 aa16.86■□□□□ 0.29
CRLF3-201ENST00000324238 A0A1B0GW64 132 aa16.86■□□□□ 0.29
CRLF3-201ENST00000324238 BMP5P22003 454 aa16.86■□□□□ 0.29
CRLF3-201ENST00000324238 KIR2DS4P43632 304 aa16.86■□□□□ 0.29
CRLF3-201ENST00000324238 KIR2DS1Q14954 304 aa16.86■□□□□ 0.29
CRLF3-201ENST00000324238 SPINK9Q5DT21 86 aa16.86■□□□□ 0.29
CRLF3-201ENST00000324238 OR5D13Q8NGL4 314 aa16.86■□□□□ 0.29
CRLF3-201ENST00000324238 SCGB1C1Q8TD33 95 aa16.86■□□□□ 0.29
CRLF3-201ENST00000324238 PSENENQ9NZ42 101 aa16.86■□□□□ 0.29
CRLF3-201ENST00000324238 PGA5P0DJD9 388 aa16.86■□□□□ 0.29
CRLF3-201ENST00000324238 PLGLB1Q02325 96 aa16.86■□□□□ 0.29
CRLF3-201ENST00000324238 FAM90A2PQ658T7 463 aa16.86■□□□□ 0.29
CRLF3-201ENST00000324238 DLL3Q9NYJ7 618 aa16.86■□□□□ 0.29
CRLF3-201ENST00000324238 LOC102723971A0A1B0GUV8 181 aa16.86■□□□□ 0.29
CRLF3-201ENST00000324238 KIAA1324LA8MWY0 1029 aaPredicted RBP16.86■□□□□ 0.29
CRLF3-201ENST00000324238 H0Y980 276 aa16.86■□□□□ 0.29
CRLF3-201ENST00000324238 IGKV1-5P01602 117 aa16.86■□□□□ 0.29
CRLF3-201ENST00000324238 HSPB1P04792 205 aaKnown RBP16.86■□□□□ 0.29
CRLF3-201ENST00000324238 TUBG1P23258 451 aa16.86■□□□□ 0.29
CRLF3-201ENST00000324238 GLIPR1P48060 266 aa16.86■□□□□ 0.29
CRLF3-201ENST00000324238 LINC00205P59089 165 aa16.86■□□□□ 0.29
CRLF3-201ENST00000324238 NUFIP2Q7Z417 695 aaKnown RBP16.86■□□□□ 0.29
CRLF3-201ENST00000324238 C1orf210Q8IVY1 113 aa16.86■□□□□ 0.29
CRLF3-201ENST00000324238 SNX22Q96L94 193 aa16.86■□□□□ 0.29
CRLF3-201ENST00000324238 PRSS50Q9UI38 385 aa16.86■□□□□ 0.29
CRLF3-201ENST00000324238 IL24Q13007 206 aa16.85■□□□□ 0.29
CRLF3-201ENST00000324238 TESK1Q15569 626 aa16.85■□□□□ 0.29
CRLF3-201ENST00000324238 KHDC3LQ587J8 217 aa16.85■□□□□ 0.29
CRLF3-201ENST00000324238 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.85■□□□□ 0.29
CRLF3-201ENST00000324238 FAM210BQ96KR6 192 aa16.85■□□□□ 0.29
CRLF3-201ENST00000324238 UNKLQ9H9P5 680 aaKnown RBP16.85■□□□□ 0.29
CRLF3-201ENST00000324238 PCSK5Q92824 1860 aa16.85■□□□□ 0.29
CRLF3-201ENST00000324238 CXorf65A6NEN9 183 aa16.85■□□□□ 0.29
CRLF3-201ENST00000324238 DNPH1O43598 174 aa16.85■□□□□ 0.29
CRLF3-201ENST00000324238 ABHD17BQ5VST6 288 aa16.85■□□□□ 0.29
CRLF3-201ENST00000324238 FAM58AQ8N1B3 248 aa16.85■□□□□ 0.29
CRLF3-201ENST00000324238 LILRB2Q8N423 598 aa16.85■□□□□ 0.29
CRLF3-201ENST00000324238 LINC00469Q8N7U9 141 aa16.85■□□□□ 0.29
CRLF3-201ENST00000324238 OR5T1Q8NG75 326 aa16.85■□□□□ 0.29
CRLF3-201ENST00000324238 GATAD1Q8WUU5 269 aa16.85■□□□□ 0.29
CRLF3-201ENST00000324238 DEFB127Q9H1M4 99 aa16.85■□□□□ 0.29
CRLF3-201ENST00000324238 IL17BQ9UHF5 180 aa16.85■□□□□ 0.29
CRLF3-201ENST00000324238 UBE2L5PA0A1B0GUS4 154 aa16.84■□□□□ 0.29
CRLF3-201ENST00000324238 NEURL1O76050 574 aa16.84■□□□□ 0.29
CRLF3-201ENST00000324238 WNT5AP41221 380 aa16.84■□□□□ 0.29
CRLF3-201ENST00000324238 UNQ6494/PRO21346Q6UXR6 183 aa16.84■□□□□ 0.29
CRLF3-201ENST00000324238 C1QL4Q86Z23 238 aa16.84■□□□□ 0.29
CRLF3-201ENST00000324238 RCC1LQ96I51 464 aaKnown RBP16.84■□□□□ 0.29
CRLF3-201ENST00000324238 OR14J1Q9UGF5 321 aa16.84■□□□□ 0.29
CRLF3-201ENST00000324238 SMG1Q96Q15 3661 aaKnown RBP16.84■□□□□ 0.29
CRLF3-201ENST00000324238 DEGS1O15121 323 aa16.84■□□□□ 0.29
CRLF3-201ENST00000324238 SYNGR2O43760 224 aa16.84■□□□□ 0.29
CRLF3-201ENST00000324238 IGLV2-14P01704 120 aa16.84■□□□□ 0.29
CRLF3-201ENST00000324238 ERVS71-1P61550 626 aa16.84■□□□□ 0.29
CRLF3-201ENST00000324238 NKX6-1P78426 367 aaPredicted RBP16.84■□□□□ 0.29
CRLF3-201ENST00000324238 SP5Q6BEB4 398 aaPredicted RBP16.84■□□□□ 0.29
CRLF3-201ENST00000324238 CXorf67Q86X51 503 aaPredicted RBP16.84■□□□□ 0.29
CRLF3-201ENST00000324238 OR2M7Q8NG81 312 aa16.84■□□□□ 0.29
CRLF3-201ENST00000324238 OR4C12Q96R67 309 aa16.84■□□□□ 0.29
CRLF3-201ENST00000324238 A0A1W2PNU3 283 aaPredicted RBP16.83■□□□□ 0.29
CRLF3-201ENST00000324238 C9orf172C9J069 976 aa16.83■□□□□ 0.29
CRLF3-201ENST00000324238 BAXQ07812 192 aa16.83■□□□□ 0.29
CRLF3-201ENST00000324238 ALKBH6Q3KRA9 238 aa16.83■□□□□ 0.29
CRLF3-201ENST00000324238 APOBEC3DQ96AK3 386 aaPredicted RBP16.83■□□□□ 0.29
CRLF3-201ENST00000324238 RBKSQ9H477 322 aa16.83■□□□□ 0.29
CRLF3-201ENST00000324238 SERPINA7P05543 415 aa16.83■□□□□ 0.28
CRLF3-201ENST00000324238 TRA2AQ13595 282 aaKnown RBP eCLIP16.83■□□□□ 0.28
CRLF3-201ENST00000324238 OR1C1Q15619 314 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms