RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 ERGIC1Q969X5 290 aa15.34■□□□□ 0.05
USP39-201ENST00000323701 GALNT14Q96FL9 552 aa15.34■□□□□ 0.05
USP39-201ENST00000323701 DIRC2Q96SL1 478 aa15.34■□□□□ 0.05
USP39-201ENST00000323701 TMEM204Q9BSN7 226 aa15.34■□□□□ 0.05
USP39-201ENST00000323701 RAB18Q9NP72 206 aa15.34■□□□□ 0.05
USP39-201ENST00000323701 FXYD6-FXYD2A0A087WZ82 144 aa15.34■□□□□ 0.05
USP39-201ENST00000323701 HSPA12AO43301 675 aa15.34■□□□□ 0.05
USP39-201ENST00000323701 CEACAM6P40199 344 aa15.34■□□□□ 0.05
USP39-201ENST00000323701 EFNB3Q15768 340 aa15.34■□□□□ 0.05
USP39-201ENST00000323701 ZNF672Q499Z4 452 aaPredicted RBP15.34■□□□□ 0.05
USP39-201ENST00000323701 TBC1D26Q86UD7 250 aa15.34■□□□□ 0.05
USP39-201ENST00000323701 GALNT11Q8NCW6 608 aa15.34■□□□□ 0.05
USP39-201ENST00000323701 CCL17Q92583 94 aa15.34■□□□□ 0.05
USP39-201ENST00000323701 MSI2Q96DH6 328 aaKnown RBP15.34■□□□□ 0.05
USP39-201ENST00000323701 SNX22Q96L94 193 aa15.34■□□□□ 0.05
USP39-201ENST00000323701 GAFA1Q96PS6 74 aa15.34■□□□□ 0.05
USP39-201ENST00000323701 DYNLRB1Q9NP97 96 aa15.34■□□□□ 0.05
USP39-201ENST00000323701 OOEPA6NGQ2 149 aa15.33■□□□□ 0.04
USP39-201ENST00000323701 ARPC5O15511 151 aa15.33■□□□□ 0.04
USP39-201ENST00000323701 KCNAB3O43448 404 aa15.33■□□□□ 0.04
USP39-201ENST00000323701 RGS11O94810 467 aa15.33■□□□□ 0.04
USP39-201ENST00000323701 PAX5Q02548 391 aa15.33■□□□□ 0.04
USP39-201ENST00000323701 ZNF565Q8N9K5 539 aa15.33■□□□□ 0.04
USP39-201ENST00000323701 LRRC46Q96FV0 321 aa15.33■□□□□ 0.04
USP39-201ENST00000323701 BBC3Q96PG8 261 aaPredicted RBP15.33■□□□□ 0.04
USP39-201ENST00000323701 SEBOXQ9HB31 216 aaPredicted RBP15.33■□□□□ 0.04
USP39-201ENST00000323701 AUP1Q9Y679 476 aa15.33■□□□□ 0.04
USP39-201ENST00000323701 ZNF462Q96JM2 2506 aa15.33■□□□□ 0.04
USP39-201ENST00000323701 IGHV3-43A0A0B4J1X8 118 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 ODAMA1E959 279 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 VSTM5A8MXK1 200 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 C15orf65H3BRN8 121 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 PHF1O43189 567 aaPredicted RBP15.32■□□□□ 0.04
USP39-201ENST00000323701 FCN3O75636 299 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 PRB1P04280 392 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 IGHV3-43DP0DP04 118 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 UTF1Q5T230 341 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 TEX36Q5VZQ5 186 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 GSG1LQ6UXU4 331 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 LYZL2Q7Z4W2 148 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 MUC15Q8N387 334 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 SDSLQ96GA7 329 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 CNTNAP3BQ96NU0 1288 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 CNTNAP3Q9BZ76 1288 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 NARFLQ9H6Q4 476 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 METTL8Q9H825 291 aaKnown RBP15.32■□□□□ 0.04
USP39-201ENST00000323701 KCNIP1Q9NZI2 227 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 FBXO9Q9UK97 447 aaPredicted RBP15.32■□□□□ 0.04
USP39-201ENST00000323701 NUP50Q9UKX7 468 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 A0A1W2PPR1 153 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 B9A039 149 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 C19orf84I3L1E1 186 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 GPR31O00270 319 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 MGST3O14880 152 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 OR8U9P0C7N5 309 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 TOR2AQ5JU69 321 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 IQCF2Q8IXL9 164 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 OR10V1Q8NGI7 309 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 OR8U1Q8NH10 309 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 GALMQ96C23 342 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 DSCAML1Q8TD84 2053 aa15.32■□□□□ 0.04
USP39-201ENST00000323701 C3orf85A0A1B0GTC6 90 aa15.31■□□□□ 0.04
USP39-201ENST00000323701 TMEM178BH3BS89 294 aa15.31■□□□□ 0.04
USP39-201ENST00000323701 CLDN14O95500 239 aa15.31■□□□□ 0.04
USP39-201ENST00000323701 PPP1CCP36873 323 aaKnown RBP15.31■□□□□ 0.04
USP39-201ENST00000323701 EDDM3BP56851 147 aa15.31■□□□□ 0.04
USP39-201ENST00000323701 ZNF788Q6ZQV5 615 aa15.31■□□□□ 0.04
USP39-201ENST00000323701 ARL11Q969Q4 196 aa15.31■□□□□ 0.04
USP39-201ENST00000323701 KCNIP3Q9Y2W7 256 aa15.31■□□□□ 0.04
USP39-201ENST00000323701 PGLYRP1O75594 196 aaPredicted RBP15.31■□□□□ 0.04
USP39-201ENST00000323701 IRF2P14316 349 aa15.31■□□□□ 0.04
USP39-201ENST00000323701 OPCMLQ14982 345 aa15.31■□□□□ 0.04
USP39-201ENST00000323701 GGNBP1Q5YKI7 109 aa15.31■□□□□ 0.04
USP39-201ENST00000323701 ASB13Q8WXK3 278 aa15.31■□□□□ 0.04
USP39-201ENST00000323701 EGLN1Q9GZT9 426 aa15.31■□□□□ 0.04
USP39-201ENST00000323701 TMEM106BQ9NUM4 274 aa15.31■□□□□ 0.04
USP39-201ENST00000323701 LYNX1G3V0Z9 82 aa15.3■□□□□ 0.04
USP39-201ENST00000323701 H0YIZ8 118 aa15.3■□□□□ 0.04
USP39-201ENST00000323701 LYNX1P0DP58 116 aa15.3■□□□□ 0.04
USP39-201ENST00000323701 IL2RGP31785 369 aa15.3■□□□□ 0.04
USP39-201ENST00000323701 RND3P61587 244 aa15.3■□□□□ 0.04
USP39-201ENST00000323701 IL15RAQ13261 267 aa15.3■□□□□ 0.04
USP39-201ENST00000323701 LTC4SQ16873 150 aa15.3■□□□□ 0.04
USP39-201ENST00000323701 MEX3BQ6ZN04 569 aaKnown RBP15.3■□□□□ 0.04
USP39-201ENST00000323701 LIAT1Q6ZQX7 453 aa15.3■□□□□ 0.04
USP39-201ENST00000323701 ZNF561Q8N587 486 aa15.3■□□□□ 0.04
USP39-201ENST00000323701 C5orf30Q96GV9 206 aa15.3■□□□□ 0.04
USP39-201ENST00000323701 LURAP1Q96LR2 239 aa15.3■□□□□ 0.04
USP39-201ENST00000323701 DNTTIP1Q9H147 329 aa15.3■□□□□ 0.04
USP39-201ENST00000323701 MS4A5Q9H3V2 200 aa15.3■□□□□ 0.04
USP39-201ENST00000323701 UBQLN2Q9UHD9 624 aa15.3■□□□□ 0.04
USP39-201ENST00000323701 RNF150Q9ULK6 438 aa15.3■□□□□ 0.04
USP39-201ENST00000323701 IFNA7P01567 189 aa15.29■□□□□ 0.04
USP39-201ENST00000323701 MUC1P15941 1255 aaPredicted RBP15.29■□□□□ 0.04
USP39-201ENST00000323701 OMGP23515 440 aa15.29■□□□□ 0.04
USP39-201ENST00000323701 TCF23Q7RTU1 214 aa15.29■□□□□ 0.04
USP39-201ENST00000323701 SLC51BQ86UW2 128 aa15.29■□□□□ 0.04
USP39-201ENST00000323701 CCDC71LQ8N9Z2 235 aa15.29■□□□□ 0.04
USP39-201ENST00000323701 BVESQ8NE79 360 aa15.29■□□□□ 0.04
USP39-201ENST00000323701 C18orf12Q96KH6 178 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms