RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 DSCAML1Q8TD84 2053 aa14.57□□□□□ -0.08
SSSCA1-201ENST00000309328 IGHV3OR16-10A0A075B7F0 116 aa14.57□□□□□ -0.08
SSSCA1-201ENST00000309328 OOSP1A8MZH6 123 aa14.57□□□□□ -0.08
SSSCA1-201ENST00000309328 IGLV1-47P01700 117 aa14.57□□□□□ -0.08
SSSCA1-201ENST00000309328 LPLP06858 475 aa14.57□□□□□ -0.08
SSSCA1-201ENST00000309328 IL3RAP26951 378 aa14.57□□□□□ -0.08
SSSCA1-201ENST00000309328 HTR1DP28221 377 aa14.57□□□□□ -0.08
SSSCA1-201ENST00000309328 AANATQ16613 207 aa14.57□□□□□ -0.08
SSSCA1-201ENST00000309328 PDZD9Q8IXQ8 264 aa14.57□□□□□ -0.08
SSSCA1-201ENST00000309328 PIP4P2Q8N4L2 257 aa14.57□□□□□ -0.08
SSSCA1-201ENST00000309328 NUDCD2Q8WVJ2 157 aa14.57□□□□□ -0.08
SSSCA1-201ENST00000309328 EDARADDQ8WWZ3 215 aa14.57□□□□□ -0.08
SSSCA1-201ENST00000309328 A6NHS1 94 aa14.56□□□□□ -0.08
SSSCA1-201ENST00000309328 LEUTXA8MZ59 168 aa14.56□□□□□ -0.08
SSSCA1-201ENST00000309328 J3QR06 171 aa14.56□□□□□ -0.08
SSSCA1-201ENST00000309328 CTDSP2O14595 271 aa14.56□□□□□ -0.08
SSSCA1-201ENST00000309328 ITGB1BP1O14713 200 aa14.56□□□□□ -0.08
SSSCA1-201ENST00000309328 HSPA12AO43301 675 aa14.56□□□□□ -0.08
SSSCA1-201ENST00000309328 GDNFP39905 211 aa14.56□□□□□ -0.08
SSSCA1-201ENST00000309328 RAB7AP51149 207 aa14.56□□□□□ -0.08
SSSCA1-201ENST00000309328 HLA-DRB5Q30154 266 aa14.56□□□□□ -0.08
SSSCA1-201ENST00000309328 CCDC144NLQ6NUI1 221 aa14.56□□□□□ -0.08
SSSCA1-201ENST00000309328 LAX1Q8IWV1 398 aa14.56□□□□□ -0.08
SSSCA1-201ENST00000309328 OR10X1Q8NGY0 326 aa14.56□□□□□ -0.08
SSSCA1-201ENST00000309328 IL1F10Q8WWZ1 152 aa14.56□□□□□ -0.08
SSSCA1-201ENST00000309328 DIRAS2Q96HU8 199 aa14.56□□□□□ -0.08
SSSCA1-201ENST00000309328 CABLES2Q9BTV7 478 aa14.56□□□□□ -0.08
SSSCA1-201ENST00000309328 OCEL1Q9H607 264 aa14.56□□□□□ -0.08
SSSCA1-201ENST00000309328 IFT46Q9NQC8 304 aa14.56□□□□□ -0.08
SSSCA1-201ENST00000309328 DPM3Q9P2X0 92 aa14.56□□□□□ -0.08
SSSCA1-201ENST00000309328 PSG11Q9UQ72 335 aa14.56□□□□□ -0.08
SSSCA1-201ENST00000309328 MRPS7Q9Y2R9 242 aaKnown RBP14.56□□□□□ -0.08
SSSCA1-201ENST00000309328 HLA-DQB1P01920 261 aa14.55□□□□□ -0.08
SSSCA1-201ENST00000309328 MADCAM1Q13477 382 aa14.55□□□□□ -0.08
SSSCA1-201ENST00000309328 LTC4SQ16873 150 aa14.55□□□□□ -0.08
SSSCA1-201ENST00000309328 RUSC1-AS1Q66K80 236 aa14.55□□□□□ -0.08
SSSCA1-201ENST00000309328 CNIH2Q6PI25 160 aa14.55□□□□□ -0.08
SSSCA1-201ENST00000309328 Q6ZPA2 131 aa14.55□□□□□ -0.08
SSSCA1-201ENST00000309328 HOGA1Q86XE5 327 aa14.55□□□□□ -0.08
SSSCA1-201ENST00000309328 LDLRAD3Q86YD5 345 aa14.55□□□□□ -0.08
SSSCA1-201ENST00000309328 IZUMO1Q8IYV9 350 aa14.55□□□□□ -0.08
SSSCA1-201ENST00000309328 TMEM86BQ8N661 226 aa14.55□□□□□ -0.08
SSSCA1-201ENST00000309328 OR2AK2Q8NG84 335 aa14.55□□□□□ -0.08
SSSCA1-201ENST00000309328 OR4P4Q8NGL7 312 aa14.55□□□□□ -0.08
SSSCA1-201ENST00000309328 OR10J5Q8NHC4 309 aa14.55□□□□□ -0.08
SSSCA1-201ENST00000309328 ZDHHC16Q969W1 377 aa14.55□□□□□ -0.08
SSSCA1-201ENST00000309328 SLC6A7Q99884 636 aa14.55□□□□□ -0.08
SSSCA1-201ENST00000309328 ST6GALNAC5Q9BVH7 336 aa14.55□□□□□ -0.08
SSSCA1-201ENST00000309328 TOLLIPQ9H0E2 274 aa14.55□□□□□ -0.08
SSSCA1-201ENST00000309328 MIXL1Q9H2W2 232 aa14.55□□□□□ -0.08
SSSCA1-201ENST00000309328 TCF21O43680 179 aa14.54□□□□□ -0.08
SSSCA1-201ENST00000309328 SSX5O60225 188 aa14.54□□□□□ -0.08
SSSCA1-201ENST00000309328 DLX1P56177 255 aa14.54□□□□□ -0.08
SSSCA1-201ENST00000309328 SSBP1Q04837 148 aaKnown RBP14.54□□□□□ -0.08
SSSCA1-201ENST00000309328 MORN2Q502X0 79 aa14.54□□□□□ -0.08
SSSCA1-201ENST00000309328 FOXB2Q5VYV0 432 aa14.54□□□□□ -0.08
SSSCA1-201ENST00000309328 PYHIN1Q6K0P9 492 aa14.54□□□□□ -0.08
SSSCA1-201ENST00000309328 SLC25A48Q6ZT89 311 aaKnown RBP14.54□□□□□ -0.08
SSSCA1-201ENST00000309328 BEST4Q8NFU0 473 aa14.54□□□□□ -0.08
SSSCA1-201ENST00000309328 SSMEM1Q8WWF3 244 aa14.54□□□□□ -0.08
SSSCA1-201ENST00000309328 ABHD14AQ9BUJ0 271 aa14.54□□□□□ -0.08
SSSCA1-201ENST00000309328 MEGF9Q9H1U4 602 aa14.54□□□□□ -0.08
SSSCA1-201ENST00000309328 DPAGT1Q9H3H5 408 aa14.54□□□□□ -0.08
SSSCA1-201ENST00000309328 SLC23A1Q9UHI7 598 aa14.54□□□□□ -0.08
SSSCA1-201ENST00000309328 ZNF230Q9UIE0 474 aaPredicted RBP14.54□□□□□ -0.08
SSSCA1-201ENST00000309328 ANXA10Q9UJ72 324 aa14.54□□□□□ -0.08
SSSCA1-201ENST00000309328 POMT1Q9Y6A1 747 aa14.54□□□□□ -0.08
SSSCA1-201ENST00000309328 TRBV6-7A0A0A0MS04 114 aa14.53□□□□□ -0.08
SSSCA1-201ENST00000309328 A0A0U1RQK1 487 aa14.53□□□□□ -0.08
SSSCA1-201ENST00000309328 BTBD17A6NE02 478 aa14.53□□□□□ -0.08
SSSCA1-201ENST00000309328 VGLL3A8MV65 326 aa14.53□□□□□ -0.08
SSSCA1-201ENST00000309328 BUB1B-PAK6H3BSN5 160 aa14.53□□□□□ -0.08
SSSCA1-201ENST00000309328 TXNL1O43396 289 aa14.53□□□□□ -0.08
SSSCA1-201ENST00000309328 SCTP09683 121 aa14.53□□□□□ -0.08
SSSCA1-201ENST00000309328 PTBP1P26599 531 aaKnown RBP eCLIP14.53□□□□□ -0.08
SSSCA1-201ENST00000309328 RIPPLY3P57055 190 aa14.53□□□□□ -0.08
SSSCA1-201ENST00000309328 TAS2R46P59540 309 aa14.53□□□□□ -0.08
SSSCA1-201ENST00000309328 ACTBP60709 375 aa14.53□□□□□ -0.08
SSSCA1-201ENST00000309328 ACTG1P63261 375 aa14.53□□□□□ -0.08
SSSCA1-201ENST00000309328 DEFB112Q30KQ8 113 aa14.53□□□□□ -0.08
SSSCA1-201ENST00000309328 LINC00299Q6ZSB3 139 aa14.53□□□□□ -0.08
SSSCA1-201ENST00000309328 ZNF439Q8NDP4 499 aa14.53□□□□□ -0.08
SSSCA1-201ENST00000309328 OR5R1Q8NH85 324 aa14.53□□□□□ -0.08
SSSCA1-201ENST00000309328 GPX8Q8TED1 209 aa14.53□□□□□ -0.08
SSSCA1-201ENST00000309328 GINS4Q9BRT9 223 aa14.53□□□□□ -0.08
SSSCA1-201ENST00000309328 ELF5Q9UKW6 265 aaPredicted RBP14.53□□□□□ -0.08
SSSCA1-201ENST00000309328 ANAPC10Q9UM13 185 aa14.53□□□□□ -0.08
SSSCA1-201ENST00000309328 KIAA2026Q5HYC2 2103 aa14.53□□□□□ -0.08
SSSCA1-201ENST00000309328 IGHV3-43A0A0B4J1X8 118 aa14.52□□□□□ -0.09
SSSCA1-201ENST00000309328 A0A1W2PRD5 423 aa14.52□□□□□ -0.09
SSSCA1-201ENST00000309328 A0A1W2PRF3 423 aa14.52□□□□□ -0.09
SSSCA1-201ENST00000309328 A0A1W2PRM7 423 aa14.52□□□□□ -0.09
SSSCA1-201ENST00000309328 FAM172BPA6NC97 362 aa14.52□□□□□ -0.09
SSSCA1-201ENST00000309328 CLDN34H7C241 214 aa14.52□□□□□ -0.09
SSSCA1-201ENST00000309328 CTDSPLO15194 276 aa14.52□□□□□ -0.09
SSSCA1-201ENST00000309328 IGHV3-43DP0DP04 118 aa14.52□□□□□ -0.09
SSSCA1-201ENST00000309328 CEACAM6P40199 344 aa14.52□□□□□ -0.09
SSSCA1-201ENST00000309328 GNG10P50151 68 aa14.52□□□□□ -0.09
SSSCA1-201ENST00000309328 DYNLT3P51808 116 aa14.52□□□□□ -0.09
SSSCA1-201ENST00000309328 ZNF137PP52743 207 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms