RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 LEAP2Q969E1 77 aa9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 SLC45A2Q9UMX9 530 aa9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 TRAV8-7A0A075B6U6 113 aa9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 IGHV3OR16-12A0A075B7B8 117 aa9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 SRSF6Q13247 344 aaKnown RBP9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 TMEM106BQ9NUM4 274 aa9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 SPRR3Q9UBC9 169 aa9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 LHFPL6Q9Y693 200 aa9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 MC5RP33032 325 aa9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 C4orf17Q53FE4 359 aa9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 FAM219AQ8IW50 185 aa9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 VSIG4Q9Y279 399 aa9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 CACNA1BQ00975 2339 aa9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 SCARB1Q8WTV0 552 aa9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 IFI6P09912 130 aa9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 PSG2P11465 335 aa9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 OR1L1Q8NH94 360 aa9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 MARS2Q96GW9 593 aaKnown RBP9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 PGLYRP3Q96LB9 341 aa9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 TUBA4BQ9H853 241 aa9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 PRR13Q9NZ81 148 aa9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 PTPRDP23468 1912 aa9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 A0A1W2PRX2 142 aa9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 B3GALNT1O75752 331 aa9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 DHRS7BQ6IAN0 325 aaPredicted RBP9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 RBM14Q96PK6 669 aaKnown RBP9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 CLEC7AQ9BXN2 247 aa9.22□□□□□ -0.93
SYNPO2-201ENST00000307142 DYNLT3P51808 116 aa9.21□□□□□ -0.93
SYNPO2-201ENST00000307142 TPPP2P59282 170 aa9.21□□□□□ -0.93
SYNPO2-201ENST00000307142 RRN3P1Q2M238 152 aa9.21□□□□□ -0.93
SYNPO2-201ENST00000307142 SLC7A5P1Q8MH63 180 aa9.21□□□□□ -0.93
SYNPO2-201ENST00000307142 OR4C12Q96R67 309 aa9.21□□□□□ -0.93
SYNPO2-201ENST00000307142 SMIM7Q9BQ49 75 aa9.21□□□□□ -0.93
SYNPO2-201ENST00000307142 LINC00470Q9BZP3 86 aa9.21□□□□□ -0.93
SYNPO2-201ENST00000307142 CBLN4Q9NTU7 201 aa9.21□□□□□ -0.93
SYNPO2-201ENST00000307142 IL19Q9UHD0 177 aa9.21□□□□□ -0.93
SYNPO2-201ENST00000307142 IL13RA2Q14627 380 aa9.21□□□□□ -0.94
SYNPO2-201ENST00000307142 METTL26Q96S19 204 aa9.21□□□□□ -0.94
SYNPO2-201ENST00000307142 CTDSP1Q9GZU7 261 aa9.21□□□□□ -0.94
SYNPO2-201ENST00000307142 UMAD1C9J7I0 102 aa9.21□□□□□ -0.94
SYNPO2-201ENST00000307142 LHX2P50458 406 aa9.21□□□□□ -0.94
SYNPO2-201ENST00000307142 CEBPEQ15744 281 aa9.21□□□□□ -0.94
SYNPO2-201ENST00000307142 TMEM45BQ96B21 275 aa9.21□□□□□ -0.94
SYNPO2-201ENST00000307142 PARD6AQ9NPB6 346 aa9.21□□□□□ -0.94
SYNPO2-201ENST00000307142 KCNE5Q9UJ90 142 aa9.21□□□□□ -0.94
SYNPO2-201ENST00000307142 TP53BP1Q12888 1972 aaPredicted RBP9.21□□□□□ -0.94
SYNPO2-201ENST00000307142 ERVS71-1P61550 626 aa9.21□□□□□ -0.94
SYNPO2-201ENST00000307142 RNFT1Q5M7Z0 435 aa9.21□□□□□ -0.94
SYNPO2-201ENST00000307142 ZBTB34Q8NCN2 500 aa9.21□□□□□ -0.94
SYNPO2-201ENST00000307142 C1orf162Q8NEQ5 155 aaPredicted RBP9.21□□□□□ -0.94
SYNPO2-201ENST00000307142 OR4X1Q8NH49 305 aa9.21□□□□□ -0.94
SYNPO2-201ENST00000307142 SRRQ9GZT4 340 aa9.21□□□□□ -0.94
SYNPO2-201ENST00000307142 UFC1Q9Y3C8 167 aa9.21□□□□□ -0.94
SYNPO2-201ENST00000307142 VSIG10L2P0DP72 767 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 PAX5Q02548 391 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 RFLNBQ8N5W9 214 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 FAM222BQ8WU58 562 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 FAM24AA6NFZ4 105 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 C1QTNF9BB2RNN3 333 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 TGFBR3LH3BV60 316 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 GSTZ1O43708 216 aaPredicted RBP9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 C1QTNF9P0C862 333 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 GZMMP51124 257 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 DHRS2Q13268 280 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 LAMTOR1Q6IAA8 161 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 EBLN2Q6P2I7 272 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 FADS6Q8N9I5 356 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 C14orf79Q96F83 325 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 CALYQ9NYX4 217 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 A0A1B0GVG6 124 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 OR2C1O95371 312 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 KIR3DL2P43630 455 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 IGKV3D-11A0A0A0MRZ8 115 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 IGHV2OR16-5A0A0B4J2B6 119 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 NDUFB6O95139 128 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 COX5BP10606 129 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 POLR2GP62487 172 aaKnown RBP eCLIP9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 ATP5G2Q06055 141 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 ZNF273Q14593 569 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 ZXDCQ2QGD7 858 aaPredicted RBP9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 C11orf87Q6NUJ2 197 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 MEGF10Q96KG7 1140 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 CACNA1GO43497 2377 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 ODAMA1E959 279 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 TRAPPC2P0DI81 140 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 TRAPPC2BP0DI82 140 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 LIMS1P48059 325 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 ZNF645Q8N7E2 425 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 DTD1Q8TEA8 209 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 ITPKCQ96DU7 683 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 JMJD8Q96S16 334 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 RPL27AP46776 148 aaKnown RBP9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 C16orf92Q96LL3 132 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 TLNRD1Q9H1K6 362 aa9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 MRPL22Q9NWU5 206 aaKnown RBP9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 MRPS18CQ9Y3D5 142 aaKnown RBP9.2□□□□□ -0.94
SYNPO2-201ENST00000307142 CTSDP07339 412 aaPredicted RBP9.19□□□□□ -0.94
SYNPO2-201ENST00000307142 CPN1P15169 458 aa9.19□□□□□ -0.94
SYNPO2-201ENST00000307142 ENDOGQ14249 297 aaKnown RBP9.19□□□□□ -0.94
SYNPO2-201ENST00000307142 XAF1Q6GPH4 301 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms