RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 GUCD1Q96NT3 240 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 OPN4Q9UHM6 478 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 CNTRLQ7Z7A1 2325 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 C9orf172C9J069 976 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 P01737 135 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 CXorf66Q5JRM2 361 aaPredicted RBP13.42□□□□□ -0.26
FNDC1-201ENST00000297267 CD300LDQ6UXZ3 194 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 GSX1Q9H4S2 264 aaPredicted RBP13.42□□□□□ -0.26
FNDC1-201ENST00000297267 FAM87AP0C7U9 286 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 BTF3P20290 206 aaKnown RBP13.42□□□□□ -0.26
FNDC1-201ENST00000297267 MMP16P51512 607 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 ABLIM2Q6H8Q1 611 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 JMJD6Q6NYC1 403 aaPredicted RBP13.42□□□□□ -0.26
FNDC1-201ENST00000297267 C19orf48Q6RUI8 117 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 ST6GALNAC3Q8NDV1 305 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 SRXN1Q9BYN0 137 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 MIOXQ9UGB7 285 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 INSIG2Q9Y5U4 225 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 P2RY1P47900 373 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 NEU1Q99519 415 aa13.42□□□□□ -0.26
FNDC1-201ENST00000297267 F2RL2O00254 374 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 CTSDP07339 412 aaPredicted RBP13.41□□□□□ -0.26
FNDC1-201ENST00000297267 GCSHP23434 173 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 SSTR5P35346 364 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 OR8B3Q8NGG8 313 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 IP6K3Q96PC2 410 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 OR8B2Q96RD0 313 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 RASL11BQ9BPW5 248 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 ZNF646O15015 1829 aaPredicted RBP13.41□□□□□ -0.26
FNDC1-201ENST00000297267 MARF1Q9Y4F3 1742 aaKnown RBP13.41□□□□□ -0.26
FNDC1-201ENST00000297267 COL8A1P27658 744 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 SUCLG1P53597 346 aaKnown RBP13.41□□□□□ -0.26
FNDC1-201ENST00000297267 FAHD2BQ6P2I3 314 aaPredicted RBP13.41□□□□□ -0.26
FNDC1-201ENST00000297267 FAHD2AQ96GK7 314 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 CHODLQ9H9P2 273 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 MDH2P40926 338 aaKnown RBP13.41□□□□□ -0.26
FNDC1-201ENST00000297267 NPBWR2P48146 333 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 RAC3P60763 192 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 Q8IYB0 196 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 OR10G8Q8NGN5 311 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 OR2T10Q8NGZ9 312 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 PGLYRP4Q96LB8 373 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 SLC17A5Q9NRA2 495 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 F11RQ9Y624 299 aaKnown RBP13.41□□□□□ -0.26
FNDC1-201ENST00000297267 IGHV3OR16-13A0A075B7E8 117 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 IGHV3-74A0A0B4J1X5 117 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 A0A0J9YW62 118 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 CD3EP07766 207 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 HLA-GP17693 338 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 SLC25A53Q5H9E4 307 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 CDCP2Q5VXM1 449 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 RAB37Q96AX2 223 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 SLC25A10Q9UBX3 287 aaPredicted RBP13.41□□□□□ -0.26
FNDC1-201ENST00000297267 GLULP15104 373 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 KIAA1644Q3SXP7 199 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 WBP1LQ9NX94 342 aa13.41□□□□□ -0.26
FNDC1-201ENST00000297267 LGALS7P47929 136 aa13.4□□□□□ -0.26
FNDC1-201ENST00000297267 ANKRD55Q3KP44 614 aa13.4□□□□□ -0.26
FNDC1-201ENST00000297267 RNF122Q9H9V4 155 aa13.4□□□□□ -0.26
FNDC1-201ENST00000297267 A0A087WV48 116 aa13.4□□□□□ -0.26
FNDC1-201ENST00000297267 TUBAL3A6NHL2 446 aa13.4□□□□□ -0.26
FNDC1-201ENST00000297267 GCM2O75603 506 aaPredicted RBP13.4□□□□□ -0.26
FNDC1-201ENST00000297267 FCGR3AP08637 254 aa13.4□□□□□ -0.26
FNDC1-201ENST00000297267 HIST3H3Q16695 136 aa13.4□□□□□ -0.26
FNDC1-201ENST00000297267 HSD17B13Q7Z5P4 300 aaPredicted RBP13.4□□□□□ -0.26
FNDC1-201ENST00000297267 GPX7Q96SL4 187 aaPredicted RBP13.4□□□□□ -0.26
FNDC1-201ENST00000297267 PARP11Q9NR21 331 aa13.4□□□□□ -0.26
FNDC1-201ENST00000297267 SPTBP11277 2137 aa13.4□□□□□ -0.26
FNDC1-201ENST00000297267 HELTA6NFD8 242 aa13.4□□□□□ -0.26
FNDC1-201ENST00000297267 CCL21O00585 134 aa13.4□□□□□ -0.26
FNDC1-201ENST00000297267 PLPPR5Q32ZL2 321 aa13.4□□□□□ -0.26
FNDC1-201ENST00000297267 CHD5Q8TDI0 1954 aa13.4□□□□□ -0.26
FNDC1-201ENST00000297267 IGHV3OR16-8A0A075B7F1 116 aa13.4□□□□□ -0.26
FNDC1-201ENST00000297267 TRGC2P03986 189 aa13.4□□□□□ -0.26
FNDC1-201ENST00000297267 KLHDC1Q8N7A1 406 aa13.4□□□□□ -0.26
FNDC1-201ENST00000297267 TIAF1O95411 115 aa13.4□□□□□ -0.27
FNDC1-201ENST00000297267 RBPMS2Q6ZRY4 209 aaKnown RBP13.4□□□□□ -0.27
FNDC1-201ENST00000297267 PGLYRP3Q96LB9 341 aa13.4□□□□□ -0.27
FNDC1-201ENST00000297267 KLK15Q9H2R5 256 aa13.4□□□□□ -0.27
FNDC1-201ENST00000297267 RBKSQ9H477 322 aa13.4□□□□□ -0.27
FNDC1-201ENST00000297267 MELTFP08582 738 aa13.39□□□□□ -0.27
FNDC1-201ENST00000297267 CRISPLD2Q9H0B8 497 aa13.39□□□□□ -0.27
FNDC1-201ENST00000297267 RPL36A-HNRNPH2H7BZ11 118 aa13.39□□□□□ -0.27
FNDC1-201ENST00000297267 HINT1P49773 126 aaPredicted RBP13.39□□□□□ -0.27
FNDC1-201ENST00000297267 RAB7AP51149 207 aa13.39□□□□□ -0.27
FNDC1-201ENST00000297267 OR4S2Q8NH73 311 aa13.39□□□□□ -0.27
FNDC1-201ENST00000297267 OR10C1Q96KK4 312 aa13.39□□□□□ -0.27
FNDC1-201ENST00000297267 IGHV3-49A0A0A0MS15 119 aa13.39□□□□□ -0.27
FNDC1-201ENST00000297267 GGTLC2Q14390 218 aa13.39□□□□□ -0.27
FNDC1-201ENST00000297267 OR1L1Q8NH94 360 aa13.39□□□□□ -0.27
FNDC1-201ENST00000297267 OR2V2Q96R30 315 aa13.39□□□□□ -0.27
FNDC1-201ENST00000297267 NDUFB4O95168 129 aa13.39□□□□□ -0.27
FNDC1-201ENST00000297267 SCGB1D4Q6XE38 83 aa13.39□□□□□ -0.27
FNDC1-201ENST00000297267 USP54Q70EL1 1684 aa13.39□□□□□ -0.27
FNDC1-201ENST00000297267 IGHV1-45A0A0A0MS14 117 aa13.39□□□□□ -0.27
FNDC1-201ENST00000297267 SMPD2O60906 423 aa13.39□□□□□ -0.27
FNDC1-201ENST00000297267 OR2Y1Q8NGV0 311 aa13.39□□□□□ -0.27
FNDC1-201ENST00000297267 DEFB104AQ8WTQ1 72 aa13.39□□□□□ -0.27
FNDC1-201ENST00000297267 A0A1W2PN81 502 aa13.38□□□□□ -0.27
FNDC1-201ENST00000297267 GP1BAP07359 652 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms