RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 GNMTQ14749 295 aa19■□□□□ 0.63
PTX3-201ENST00000295927 FAM53AQ6NSI3 398 aaPredicted RBP19■□□□□ 0.63
PTX3-201ENST00000295927 GSG1LQ6UXU4 331 aa19■□□□□ 0.63
PTX3-201ENST00000295927 TBC1D26Q86UD7 250 aa19■□□□□ 0.63
PTX3-201ENST00000295927 SUCNR1Q9BXA5 334 aa19■□□□□ 0.63
PTX3-201ENST00000295927 NCOR1P1Q9H4R4 102 aa19■□□□□ 0.63
PTX3-201ENST00000295927 METTL8Q9H825 291 aaKnown RBP19■□□□□ 0.63
PTX3-201ENST00000295927 CBLN4Q9NTU7 201 aa19■□□□□ 0.63
PTX3-201ENST00000295927 TMPRSS2O15393 492 aa18.99■□□□□ 0.63
PTX3-201ENST00000295927 SPINT2O43291 252 aa18.99■□□□□ 0.63
PTX3-201ENST00000295927 IGFBP2P18065 325 aa18.99■□□□□ 0.63
PTX3-201ENST00000295927 CMTM1Q8IZ96 169 aa18.99■□□□□ 0.63
PTX3-201ENST00000295927 C14orf79Q96F83 325 aa18.99■□□□□ 0.63
PTX3-201ENST00000295927 GPHA2Q96T91 129 aa18.99■□□□□ 0.63
PTX3-201ENST00000295927 HSPB11Q9Y547 144 aa18.99■□□□□ 0.63
PTX3-201ENST00000295927 HRNRQ86YZ3 2850 aaPredicted RBP18.99■□□□□ 0.63
PTX3-201ENST00000295927 C3orf85A0A1B0GTC6 90 aa18.98■□□□□ 0.63
PTX3-201ENST00000295927 PHF1O43189 567 aaPredicted RBP18.98■□□□□ 0.63
PTX3-201ENST00000295927 HOXB5P09067 269 aa18.98■□□□□ 0.63
PTX3-201ENST00000295927 ZNF843Q8N446 348 aa18.98■□□□□ 0.63
PTX3-201ENST00000295927 GLYATL2Q8WU03 294 aa18.98■□□□□ 0.63
PTX3-201ENST00000295927 TP53RKQ96S44 253 aa18.98■□□□□ 0.63
PTX3-201ENST00000295927 TOLLIPQ9H0E2 274 aa18.98■□□□□ 0.63
PTX3-201ENST00000295927 OR6C3Q9NZP0 311 aa18.98■□□□□ 0.63
PTX3-201ENST00000295927 RBM7Q9Y580 266 aaKnown RBP18.98■□□□□ 0.63
PTX3-201ENST00000295927 ZFYVE26Q68DK2 2539 aa18.98■□□□□ 0.63
PTX3-201ENST00000295927 A0A1W2PPR1 153 aa18.98■□□□□ 0.63
PTX3-201ENST00000295927 MPTX1A8MV57 137 aa18.98■□□□□ 0.63
PTX3-201ENST00000295927 OR8U9P0C7N5 309 aa18.98■□□□□ 0.63
PTX3-201ENST00000295927 HFEQ30201 348 aa18.98■□□□□ 0.63
PTX3-201ENST00000295927 C11orf71Q6IPW1 123 aa18.98■□□□□ 0.63
PTX3-201ENST00000295927 LIAT1Q6ZQX7 453 aa18.98■□□□□ 0.63
PTX3-201ENST00000295927 BVESQ8NE79 360 aa18.98■□□□□ 0.63
PTX3-201ENST00000295927 OR8U1Q8NH10 309 aa18.98■□□□□ 0.63
PTX3-201ENST00000295927 OR2S2Q9NQN1 319 aa18.98■□□□□ 0.63
PTX3-201ENST00000295927 IGLV2-14P01704 120 aa18.97■□□□□ 0.63
PTX3-201ENST00000295927 SOD3P08294 240 aa18.97■□□□□ 0.63
PTX3-201ENST00000295927 HTD2P86397 168 aa18.97■□□□□ 0.63
PTX3-201ENST00000295927 FGFRL1Q8N441 504 aa18.97■□□□□ 0.63
PTX3-201ENST00000295927 NINJ1Q92982 152 aa18.97■□□□□ 0.63
PTX3-201ENST00000295927 MSI2Q96DH6 328 aaKnown RBP18.97■□□□□ 0.63
PTX3-201ENST00000295927 FBXO9Q9UK97 447 aaPredicted RBP18.97■□□□□ 0.63
PTX3-201ENST00000295927 TRAV14DV4A0A0A6YYC5 116 aa18.96■□□□□ 0.63
PTX3-201ENST00000295927 IGHV3-43A0A0B4J1X8 118 aa18.96■□□□□ 0.63
PTX3-201ENST00000295927 TNFRSF13BO14836 293 aaPredicted RBP18.96■□□□□ 0.63
PTX3-201ENST00000295927 TNFSF12O43508 249 aa18.96■□□□□ 0.63
PTX3-201ENST00000295927 PGLYRP1O75594 196 aaPredicted RBP18.96■□□□□ 0.63
PTX3-201ENST00000295927 IGHV3-43DP0DP04 118 aa18.96■□□□□ 0.63
PTX3-201ENST00000295927 PPP1CCP36873 323 aaKnown RBP18.96■□□□□ 0.63
PTX3-201ENST00000295927 ZBTB8BQ8NAP8 495 aaPredicted RBP18.96■□□□□ 0.63
PTX3-201ENST00000295927 LRBAP50851 2863 aa18.96■□□□□ 0.63
PTX3-201ENST00000295927 LYNX1G3V0Z9 82 aa18.96■□□□□ 0.63
PTX3-201ENST00000295927 DANCRP0C864 163 aa18.96■□□□□ 0.63
PTX3-201ENST00000295927 CGB3P0DN86 165 aa18.96■□□□□ 0.63
PTX3-201ENST00000295927 CGB7P0DN87 165 aa18.96■□□□□ 0.63
PTX3-201ENST00000295927 LYNX1P0DP58 116 aa18.96■□□□□ 0.63
PTX3-201ENST00000295927 COL8A2P25067 703 aa18.96■□□□□ 0.63
PTX3-201ENST00000295927 IFITM2Q01629 132 aa18.96■□□□□ 0.63
PTX3-201ENST00000295927 LGALSLQ3ZCW2 172 aaPredicted RBP18.96■□□□□ 0.63
PTX3-201ENST00000295927 LRTM2Q8N967 370 aa18.96■□□□□ 0.63
PTX3-201ENST00000295927 PPP1R1CQ8WVI7 109 aa18.96■□□□□ 0.63
PTX3-201ENST00000295927 OR10C1Q96KK4 312 aa18.96■□□□□ 0.63
PTX3-201ENST00000295927 TMEM246Q9BRR3 403 aa18.96■□□□□ 0.63
PTX3-201ENST00000295927 KCNS2Q9ULS6 477 aa18.96■□□□□ 0.63
PTX3-201ENST00000295927 S100GP29377 79 aa18.95■□□□□ 0.62
PTX3-201ENST00000295927 LTC4SQ16873 150 aa18.95■□□□□ 0.62
PTX3-201ENST00000295927 LYPD2Q6UXB3 125 aa18.95■□□□□ 0.62
PTX3-201ENST00000295927 AKR1E2Q96JD6 320 aa18.95■□□□□ 0.62
PTX3-201ENST00000295927 NMES1Q9C002 83 aa18.95■□□□□ 0.62
PTX3-201ENST00000295927 RAB1BQ9H0U4 201 aa18.95■□□□□ 0.62
PTX3-201ENST00000295927 CALYQ9NYX4 217 aa18.95■□□□□ 0.62
PTX3-201ENST00000295927 COMMD9Q9P000 198 aa18.95■□□□□ 0.62
PTX3-201ENST00000295927 SLC25A10Q9UBX3 287 aaPredicted RBP18.95■□□□□ 0.62
PTX3-201ENST00000295927 NDUFB7P17568 137 aa18.94■□□□□ 0.62
PTX3-201ENST00000295927 CYCSP99999 105 aaKnown RBP18.94■□□□□ 0.62
PTX3-201ENST00000295927 FGL1Q08830 312 aa18.94■□□□□ 0.62
PTX3-201ENST00000295927 LRRC37A5PQ49AS3 106 aa18.94■□□□□ 0.62
PTX3-201ENST00000295927 LGI3Q8N145 548 aa18.94■□□□□ 0.62
PTX3-201ENST00000295927 LHFPL5Q8TAF8 219 aa18.94■□□□□ 0.62
PTX3-201ENST00000295927 TMEM222Q9H0R3 208 aa18.94■□□□□ 0.62
PTX3-201ENST00000295927 UBE2J1Q9Y385 318 aaPredicted RBP18.94■□□□□ 0.62
PTX3-201ENST00000295927 FXYD6-FXYD2A0A087WZ82 144 aa18.94■□□□□ 0.62
PTX3-201ENST00000295927 TRGV10A0A0A0MS01 117 aa18.94■□□□□ 0.62
PTX3-201ENST00000295927 ADAM20O43506 726 aa18.94■□□□□ 0.62
PTX3-201ENST00000295927 C1QL1O75973 258 aa18.94■□□□□ 0.62
PTX3-201ENST00000295927 GGNBP1Q5YKI7 109 aa18.94■□□□□ 0.62
PTX3-201ENST00000295927 MEX3BQ6ZN04 569 aaKnown RBP18.94■□□□□ 0.62
PTX3-201ENST00000295927 TCF23Q7RTU1 214 aa18.94■□□□□ 0.62
PTX3-201ENST00000295927 DTX2Q86UW9 622 aa18.94■□□□□ 0.62
PTX3-201ENST00000295927 C18orf12Q96KH6 178 aa18.94■□□□□ 0.62
PTX3-201ENST00000295927 EPG5Q9HCE0 2579 aa18.94■□□□□ 0.62
PTX3-201ENST00000295927 F2RL2O00254 374 aa18.93■□□□□ 0.62
PTX3-201ENST00000295927 FCN3O75636 299 aa18.93■□□□□ 0.62
PTX3-201ENST00000295927 C17orf58Q2M2W7 97 aa18.93■□□□□ 0.62
PTX3-201ENST00000295927 LYZL2Q7Z4W2 148 aa18.93■□□□□ 0.62
PTX3-201ENST00000295927 C2orf50Q96LR7 162 aa18.93■□□□□ 0.62
PTX3-201ENST00000295927 RNF150Q9ULK6 438 aa18.93■□□□□ 0.62
PTX3-201ENST00000295927 IFNA21P01568 189 aa18.92■□□□□ 0.62
PTX3-201ENST00000295927 F2RP25116 425 aa18.92■□□□□ 0.62
PTX3-201ENST00000295927 DRAM1Q8N682 238 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms