RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 CROCCP3Q8IVE0 287 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 LYG1Q8N1E2 194 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 C3orf56Q8N813 242 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 SAMD12Q8N8I0 201 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 OR2AK2Q8NG84 335 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 OR52M1Q8NGK5 317 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 OR4C13Q8NGP0 309 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 OR5H6Q8NGV6 325 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 OR4F5Q8NH21 305 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 OR56B4Q8NH76 319 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 MAFIPQ8WZ33 124 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 PTX4Q96A99 478 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 ABHD14AQ9BUJ0 271 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 NAA50Q9GZZ1 169 aaKnown RBP5.28□□□□□ -1.56
CD44-204ENST00000279452 MEGF9Q9H1U4 602 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 RAB18Q9NP72 206 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 MBNL3Q9NUK0 354 aaKnown RBP5.28□□□□□ -1.56
CD44-204ENST00000279452 SCOCQ9UIL1 159 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 JPT1Q9UK76 154 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 PITPNC1Q9UKF7 332 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 MGAT4AQ9UM21 535 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 TCF19Q9Y242 345 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 SONP18583 2426 aaKnown RBP5.28□□□□□ -1.56
CD44-204ENST00000279452 MTORP42345 2549 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 TLN2Q9Y4G6 2542 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 ZANQ9Y493 2812 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 TRAV18A0A075B6X5 111 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 IGHV3-72A0A0B4J1Y9 119 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 TMEM235A6NFC5 223 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 FOXI3A8MTJ6 420 aaPredicted RBP5.27□□□□□ -1.57
CD44-204ENST00000279452 SERPINE3A8MV23 424 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 FAM25AB3EWG3 89 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 FAM25CB3EWG5 89 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 FAM25GB3EWG6 89 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 RAB27BO00194 218 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 MFNGO00587 321 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 TIMM23O14925 209 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 BET1O15155 118 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 ST8SIA5O15466 376 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 PEX14O75381 377 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 GABARAPO95166 117 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 NAPSAO96009 420 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 GAPDHP04406 335 aaKnown RBP5.27□□□□□ -1.57
CD44-204ENST00000279452 FCER2P06734 321 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 SCTP09683 121 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 MDKP21741 143 aaPredicted RBP5.27□□□□□ -1.57
CD44-204ENST00000279452 ZBTB25P24278 435 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 KIR2DS4P43632 304 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 RAB7AP51149 207 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 RORCP51449 518 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 SCAND1P57086 179 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 LOXL3P58215 753 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 DIAPH2-AS1Q14236 149 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 HNF4GQ14541 408 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 KIR2DS1Q14954 304 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 HMGN3Q15651 99 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 AANATQ16613 207 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 TUSC1Q2TAM9 212 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 CDNFQ49AH0 187 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 AWAT1Q58HT5 328 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 C9orf152Q5JTZ5 239 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 UBE2NLQ5JXB2 153 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 STEAP3Q658P3 488 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 LIAT1Q6ZQX7 453 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 SLC16A12Q6ZSM3 486 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 ZNF554Q86TJ5 538 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 TGIF2LXQ8IUE1 241 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 GAPTQ8N292 157 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 DTX3Q8N9I9 347 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 NUDCD2Q8WVJ2 157 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 AP3S1Q92572 193 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 SLC25A46Q96AG3 418 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 SLC25A38Q96DW6 304 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 AJUBAQ96IF1 538 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 AKR1E2Q96JD6 320 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 GINS4Q9BRT9 223 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 ST6GALNAC5Q9BVH7 336 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 NPFFR1Q9GZQ6 430 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 DCSTAMPQ9H295 470 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 LINC00574Q9H8X3 128 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 BEX1Q9HBH7 125 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 Q9N2K0 584 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 DIABLOQ9NR28 239 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 C1RLQ9NZP8 487 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 OR1A1Q9P1Q5 309 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 COMMD3Q9UBI1 195 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 ZNF230Q9UIE0 474 aaPredicted RBP5.27□□□□□ -1.57
CD44-204ENST00000279452 RBM7Q9Y580 266 aaKnown RBP5.27□□□□□ -1.57
CD44-204ENST00000279452 C2CD3Q4AC94 2353 aa5.27□□□□□ -1.57
CD44-204ENST00000279452 TMEM89A2RUT3 159 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 VGLL3A8MV65 326 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 OOSP1A8MZH6 123 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 TRDCB7Z8K6 153 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 FABP7O15540 132 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 TXNL1O43396 289 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 CHST1O43916 411 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 IGKV1D-33P01593 117 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 IGKV1-33P01594 117 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 TFAP2AP05549 437 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 SNRNP70P08621 437 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms