RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 TNFRSF14Q92956 283 aa13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 GPHA2Q96T91 129 aa13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 REPIN1Q9BWE0 567 aaKnown RBP13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 CLN8Q9UBY8 286 aa13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 CLEC18AA5D8T8 446 aa13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 PDGFBP01127 241 aaPredicted RBP13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 ZNF728P0DKX0 622 aa13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 TNFSF4P23510 183 aa13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 TESK1Q15569 626 aa13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 C1orf174Q8IYL3 243 aa13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 PRR22Q8IZ63 422 aa13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 ATOH7Q8N100 152 aa13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 CLEC18CQ8NCF0 446 aa13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 ABHD3Q8WU67 409 aa13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 PSMF1Q92530 271 aa13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 WDYHV1Q96HA8 205 aa13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 GPER1Q99527 375 aa13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 DECR2Q9NUI1 292 aa13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 RTTNQ86VV8 2226 aa13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 UNC13CQ8NB66 2214 aa13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 IGKV1D-43A0A0B4J1Z2 117 aa13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 FOXI3A8MTJ6 420 aaPredicted RBP13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 DIRC3C9JPN6 131 aa13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 SUMO1P63165 101 aaKnown RBP13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 LRTM2Q8N967 370 aa13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 STARD4Q96DR4 205 aa13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 P2RX4Q99571 388 aa13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 PBOV1Q9GZY1 135 aa13.5□□□□□ -0.25
CTDSP1-201ENST00000273062 ZNF814B7Z6K7 855 aa13.49□□□□□ -0.25
CTDSP1-201ENST00000273062 PIAS2O75928 621 aa13.49□□□□□ -0.25
CTDSP1-201ENST00000273062 COMMD2Q86X83 199 aa13.49□□□□□ -0.25
CTDSP1-201ENST00000273062 OR2M3Q8NG83 312 aa13.49□□□□□ -0.25
CTDSP1-201ENST00000273062 OR2D3Q8NGH3 330 aa13.49□□□□□ -0.25
CTDSP1-201ENST00000273062 ZNF519Q8TB69 540 aa13.49□□□□□ -0.25
CTDSP1-201ENST00000273062 PINX1Q96BK5 328 aaKnown RBP13.49□□□□□ -0.25
CTDSP1-201ENST00000273062 AGMATQ9BSE5 352 aa13.49□□□□□ -0.25
CTDSP1-201ENST00000273062 WNT10AQ9GZT5 417 aa13.49□□□□□ -0.25
CTDSP1-201ENST00000273062 VDAC3Q9Y277 283 aa13.49□□□□□ -0.25
CTDSP1-201ENST00000273062 TRAV30A0A087WSZ9 112 aa13.49□□□□□ -0.25
CTDSP1-201ENST00000273062 H3BMH7 237 aa13.49□□□□□ -0.25
CTDSP1-201ENST00000273062 ZNF737O75373 536 aa13.49□□□□□ -0.25
CTDSP1-201ENST00000273062 SAP30O75446 220 aa13.49□□□□□ -0.25
CTDSP1-201ENST00000273062 GYPAP02724 150 aa13.49□□□□□ -0.25
CTDSP1-201ENST00000273062 OPN1LWP04000 364 aa13.49□□□□□ -0.25
CTDSP1-201ENST00000273062 TSPOP30536 169 aa13.49□□□□□ -0.25
CTDSP1-201ENST00000273062 BMI1P35226 326 aa13.49□□□□□ -0.25
CTDSP1-201ENST00000273062 WBP2NLQ6ICG8 309 aa13.49□□□□□ -0.25
CTDSP1-201ENST00000273062 OR1L3Q8NH93 324 aa13.49□□□□□ -0.25
CTDSP1-201ENST00000273062 OR2V1Q8NHB1 315 aa13.49□□□□□ -0.25
CTDSP1-201ENST00000273062 MEGF9Q9H1U4 602 aa13.49□□□□□ -0.25
CTDSP1-201ENST00000273062 SERPINA7P05543 415 aa13.48□□□□□ -0.25
CTDSP1-201ENST00000273062 IFI6P09912 130 aa13.48□□□□□ -0.25
CTDSP1-201ENST00000273062 HLA-DOBP13765 273 aa13.48□□□□□ -0.25
CTDSP1-201ENST00000273062 ZNF20P17024 532 aa13.48□□□□□ -0.25
CTDSP1-201ENST00000273062 MSMO1Q15800 293 aa13.48□□□□□ -0.25
CTDSP1-201ENST00000273062 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.48□□□□□ -0.25
CTDSP1-201ENST00000273062 SLC25A45Q8N413 288 aa13.48□□□□□ -0.25
CTDSP1-201ENST00000273062 SLC46A1Q96NT5 459 aa13.48□□□□□ -0.25
CTDSP1-201ENST00000273062 SAMD10Q9BYL1 202 aa13.48□□□□□ -0.25
CTDSP1-201ENST00000273062 NXF5Q9H1B4 397 aaKnown RBP13.48□□□□□ -0.25
CTDSP1-201ENST00000273062 RP1P56715 2156 aa13.48□□□□□ -0.25
CTDSP1-201ENST00000273062 IGKV1-9A0A0C4DH69 117 aa13.48□□□□□ -0.25
CTDSP1-201ENST00000273062 ARR3P36575 388 aa13.48□□□□□ -0.25
CTDSP1-201ENST00000273062 RPL27P61353 136 aaKnown RBP13.48□□□□□ -0.25
CTDSP1-201ENST00000273062 MEF2BQ02080 365 aaPredicted RBP13.48□□□□□ -0.25
CTDSP1-201ENST00000273062 FAM89BQ8N5H3 189 aa13.48□□□□□ -0.25
CTDSP1-201ENST00000273062 SLAMF6Q96DU3 332 aa13.48□□□□□ -0.25
CTDSP1-201ENST00000273062 ZC2HC1AQ96GY0 325 aa13.48□□□□□ -0.25
CTDSP1-201ENST00000273062 PLK3Q9H4B4 646 aa13.48□□□□□ -0.25
CTDSP1-201ENST00000273062 ANXA10Q9UJ72 324 aa13.48□□□□□ -0.25
CTDSP1-201ENST00000273062 DOCK11Q5JSL3 2073 aa13.48□□□□□ -0.25
CTDSP1-201ENST00000273062 IGHV1OR21-1A0A087WYE8 117 aa13.47□□□□□ -0.25
CTDSP1-201ENST00000273062 ZNF850A8MQ14 1090 aa13.47□□□□□ -0.25
CTDSP1-201ENST00000273062 SRP14P37108 136 aaKnown RBP13.47□□□□□ -0.25
CTDSP1-201ENST00000273062 LHX2P50458 406 aa13.47□□□□□ -0.25
CTDSP1-201ENST00000273062 POU3F1Q03052 451 aaPredicted RBP13.47□□□□□ -0.25
CTDSP1-201ENST00000273062 TMEM267Q0VDI3 215 aaPredicted RBP13.47□□□□□ -0.25
CTDSP1-201ENST00000273062 SHISA6Q6ZSJ9 500 aa13.47□□□□□ -0.25
CTDSP1-201ENST00000273062 MRGPRGQ86SM5 289 aa13.47□□□□□ -0.25
CTDSP1-201ENST00000273062 PRO3102Q9H379 93 aa13.47□□□□□ -0.25
CTDSP1-201ENST00000273062 RYDENQ9NUL5 291 aaKnown RBP13.47□□□□□ -0.25
CTDSP1-201ENST00000273062 PNMTP11086 282 aa13.47□□□□□ -0.25
CTDSP1-201ENST00000273062 ZNF17P17021 662 aa13.47□□□□□ -0.25
CTDSP1-201ENST00000273062 CBLN1P23435 193 aa13.47□□□□□ -0.25
CTDSP1-201ENST00000273062 PAFAH1B2P68402 229 aa13.47□□□□□ -0.25
CTDSP1-201ENST00000273062 ARL6IP1Q15041 203 aa13.47□□□□□ -0.25
CTDSP1-201ENST00000273062 CRIP3Q6Q6R5 217 aa13.47□□□□□ -0.25
CTDSP1-201ENST00000273062 TMEM144Q7Z5S9 345 aa13.47□□□□□ -0.25
CTDSP1-201ENST00000273062 ZNF596Q8TC21 504 aa13.47□□□□□ -0.25
CTDSP1-201ENST00000273062 FAM71F1Q96KD3 344 aaPredicted RBP13.47□□□□□ -0.25
CTDSP1-201ENST00000273062 UHRF2Q96PU4 802 aa13.47□□□□□ -0.25
CTDSP1-201ENST00000273062 SF3B5Q9BWJ5 86 aaKnown RBP13.47□□□□□ -0.25
CTDSP1-201ENST00000273062 ZNF286AQ9HBT8 521 aa13.47□□□□□ -0.25
CTDSP1-201ENST00000273062 A0A1W2PRS3 328 aa13.46□□□□□ -0.25
CTDSP1-201ENST00000273062 FAHP16930 419 aa13.46□□□□□ -0.25
CTDSP1-201ENST00000273062 MRPL30Q8TCC3 161 aaKnown RBP13.46□□□□□ -0.25
CTDSP1-201ENST00000273062 NAT6Q93015 286 aa13.46□□□□□ -0.25
CTDSP1-201ENST00000273062 TMEM56Q96MV1 263 aa13.46□□□□□ -0.25
CTDSP1-201ENST00000273062 BET1LQ9NYM9 111 aa13.46□□□□□ -0.25
CTDSP1-201ENST00000273062 TMEM56-RWDD3S4R434 201 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 313.6 ms