RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 ZDHHC11Q9H8X9 412 aa14.42□□□□□ -0.1
PHRF1-201ENST00000264555 GAR1Q9NY12 217 aaKnown RBP14.42□□□□□ -0.1
PHRF1-201ENST00000264555 PRR19A6NJB7 356 aa14.42□□□□□ -0.1
PHRF1-201ENST00000264555 MGST3O14880 152 aa14.42□□□□□ -0.1
PHRF1-201ENST00000264555 SULT1A2P50226 295 aa14.42□□□□□ -0.1
PHRF1-201ENST00000264555 TMEM18Q96B42 140 aa14.42□□□□□ -0.1
PHRF1-201ENST00000264555 AQP10Q96PS8 301 aa14.42□□□□□ -0.1
PHRF1-201ENST00000264555 IGHV3OR15-7A0A075B7D8 119 aa14.42□□□□□ -0.1
PHRF1-201ENST00000264555 OPN1MWP04001 364 aa14.42□□□□□ -0.1
PHRF1-201ENST00000264555 OPN1MW2P0DN77 364 aa14.42□□□□□ -0.1
PHRF1-201ENST00000264555 OPN1MW3P0DN78 364 aa14.42□□□□□ -0.1
PHRF1-201ENST00000264555 OR8G5Q8NG78 346 aa14.42□□□□□ -0.1
PHRF1-201ENST00000264555 ABHD14BQ96IU4 210 aa14.42□□□□□ -0.1
PHRF1-201ENST00000264555 OR10C1Q96KK4 312 aa14.42□□□□□ -0.1
PHRF1-201ENST00000264555 TIMP4Q99727 224 aa14.42□□□□□ -0.1
PHRF1-201ENST00000264555 DLL3Q9NYJ7 618 aa14.42□□□□□ -0.1
PHRF1-201ENST00000264555 FBP1P09467 338 aa14.41□□□□□ -0.1
PHRF1-201ENST00000264555 DPPA3Q6W0C5 159 aa14.41□□□□□ -0.1
PHRF1-201ENST00000264555 CTDSP1Q9GZU7 261 aa14.41□□□□□ -0.1
PHRF1-201ENST00000264555 PRNDQ9UKY0 176 aa14.41□□□□□ -0.1
PHRF1-201ENST00000264555 RNF24Q9Y225 148 aa14.41□□□□□ -0.1
PHRF1-201ENST00000264555 CHEK1O14757 476 aa14.41□□□□□ -0.1
PHRF1-201ENST00000264555 SYNGR3O43761 229 aa14.41□□□□□ -0.1
PHRF1-201ENST00000264555 CLN5O75503 358 aa14.41□□□□□ -0.1
PHRF1-201ENST00000264555 NCBP2LA6PVI3 153 aaKnown RBP14.41□□□□□ -0.1
PHRF1-201ENST00000264555 J3QW42 95 aa14.41□□□□□ -0.1
PHRF1-201ENST00000264555 GALR1P47211 349 aa14.41□□□□□ -0.1
PHRF1-201ENST00000264555 NRN1LQ496H8 165 aa14.41□□□□□ -0.1
PHRF1-201ENST00000264555 ATP1A1-AS1Q5TC04 95 aa14.41□□□□□ -0.1
PHRF1-201ENST00000264555 SIGLEC12Q96PQ1 595 aa14.41□□□□□ -0.1
PHRF1-201ENST00000264555 GP6Q9HCN6 339 aa14.41□□□□□ -0.1
PHRF1-201ENST00000264555 NLRC5Q86WI3 1866 aa14.41□□□□□ -0.1
PHRF1-201ENST00000264555 HBZP02008 142 aa14.41□□□□□ -0.1
PHRF1-201ENST00000264555 RPL11P62913 178 aaKnown RBP14.41□□□□□ -0.1
PHRF1-201ENST00000264555 TUSC1Q2TAM9 212 aa14.41□□□□□ -0.1
PHRF1-201ENST00000264555 VAX2Q9UIW0 290 aa14.41□□□□□ -0.1
PHRF1-201ENST00000264555 CEACAM3P40198 252 aa14.4□□□□□ -0.1
PHRF1-201ENST00000264555 PRR27Q6MZM9 219 aa14.4□□□□□ -0.1
PHRF1-201ENST00000264555 COX7A1P24310 79 aa14.4□□□□□ -0.1
PHRF1-201ENST00000264555 SCGB2A2Q13296 93 aa14.4□□□□□ -0.1
PHRF1-201ENST00000264555 SEBOXQ9HB31 216 aaPredicted RBP14.4□□□□□ -0.1
PHRF1-201ENST00000264555 NAT8Q9UHE5 227 aa14.4□□□□□ -0.1
PHRF1-201ENST00000264555 A0A1B0GTI1 187 aa14.4□□□□□ -0.1
PHRF1-201ENST00000264555 GDF9O60383 454 aa14.4□□□□□ -0.1
PHRF1-201ENST00000264555 TLE1Q04724 770 aa14.4□□□□□ -0.1
PHRF1-201ENST00000264555 TMEM252Q8N6L7 170 aa14.4□□□□□ -0.1
PHRF1-201ENST00000264555 TM2D1Q9BX74 207 aa14.4□□□□□ -0.1
PHRF1-201ENST00000264555 MRPS18CQ9Y3D5 142 aaKnown RBP14.4□□□□□ -0.1
PHRF1-201ENST00000264555 A0A0B4J293 547 aa14.4□□□□□ -0.1
PHRF1-201ENST00000264555 NDFIP1Q9BT67 221 aa14.4□□□□□ -0.1
PHRF1-201ENST00000264555 PGLYRP1O75594 196 aaPredicted RBP14.4□□□□□ -0.1
PHRF1-201ENST00000264555 CD8AP01732 235 aa14.4□□□□□ -0.1
PHRF1-201ENST00000264555 HKR1P10072 659 aa14.4□□□□□ -0.1
PHRF1-201ENST00000264555 UCP3P55916 312 aa14.4□□□□□ -0.1
PHRF1-201ENST00000264555 ZP1P60852 638 aa14.4□□□□□ -0.1
PHRF1-201ENST00000264555 PLAC9Q5JTB6 97 aa14.4□□□□□ -0.1
PHRF1-201ENST00000264555 ASPHD2Q6ICH7 369 aa14.4□□□□□ -0.1
PHRF1-201ENST00000264555 OR1L4Q8NGR5 311 aa14.4□□□□□ -0.1
PHRF1-201ENST00000264555 FAM210BQ96KR6 192 aa14.4□□□□□ -0.1
PHRF1-201ENST00000264555 PTPRDP23468 1912 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 PRR32B1ATL7 298 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 RBP4P02753 201 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 CTRB1P17538 263 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 NPBWR2P48146 333 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 AARDQ4LEZ3 155 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 CTRB2Q6GPI1 263 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 C1QL2Q7Z5L3 287 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 GINS3Q9BRX5 216 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 XKRY2A2RUG3 117 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 MST1P26927 711 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 MRGPRGQ86SM5 289 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 CBLN2Q8IUK8 224 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 TCTEX1D1Q8N7M0 179 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 OR52L2PQ8NGH6 319 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 C7orf77A4D0Y5 90 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 SPP1P10451 314 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 ZDBF2Q9HCK1 2354 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 hCG_38984A0A1B0GV85 526 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 B4DEV8 164 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 HPRT1P00492 218 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 CLEC3BP05452 202 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 RAB5AP20339 215 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 NHLRC3Q5JS37 347 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 MARS2Q96GW9 593 aaKnown RBP14.39□□□□□ -0.11
PHRF1-201ENST00000264555 DIRC2Q96SL1 478 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 RNF2Q99496 336 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 MS4A7Q9GZW8 240 aaPredicted RBP14.39□□□□□ -0.11
PHRF1-201ENST00000264555 TOLLIPQ9H0E2 274 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 SMDT1Q9H4I9 107 aa14.39□□□□□ -0.11
PHRF1-201ENST00000264555 SNRPEP62304 92 aaKnown RBP14.38□□□□□ -0.11
PHRF1-201ENST00000264555 ZNF66Q6ZN08 573 aa14.38□□□□□ -0.11
PHRF1-201ENST00000264555 KLF14Q8TD94 323 aaPredicted RBP14.38□□□□□ -0.11
PHRF1-201ENST00000264555 ZNF705AQ6ZN79 300 aaPredicted RBP14.38□□□□□ -0.11
PHRF1-201ENST00000264555 MYPOPQ86VE0 399 aaPredicted RBP14.38□□□□□ -0.11
PHRF1-201ENST00000264555 TPRX1Q8N7U7 411 aa14.38□□□□□ -0.11
PHRF1-201ENST00000264555 SIGLECL1Q8N7X8 197 aa14.38□□□□□ -0.11
PHRF1-201ENST00000264555 OR2T6Q8NHC8 308 aa14.38□□□□□ -0.11
PHRF1-201ENST00000264555 OR2V2Q96R30 315 aa14.38□□□□□ -0.11
PHRF1-201ENST00000264555 TMEM11P17152 192 aa14.38□□□□□ -0.11
PHRF1-201ENST00000264555 ARL16Q0P5N6 197 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms