RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 IGFBP7Q16270 282 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 TMEM178AQ8NBL3 297 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 OR10A7Q8NGE5 316 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 ACY3Q96HD9 319 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 MS4A10Q96PG2 267 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 HES7Q9BYE0 225 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 SRXN1Q9BYN0 137 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 TINAGQ9UJW2 476 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 KLF13Q9Y2Y9 288 aaPredicted RBP3.99□□□□□ -1.77
VPS13C-201ENST00000249837 RFNGQ9Y644 331 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 A0A0G2JMM0 328 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 A0A1W2PPB8 328 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 A0A1W2PRS3 328 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 KIR3DP1A8MWS1 328 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 PATE3B3GLJ2 98 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 AGFG2O95081 481 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 AESQ08117 197 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 FHL1Q13642 323 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 SMIM21Q3B7S5 101 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 CARFQ8N187 725 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 PAQR4Q8N4S7 273 aaPredicted RBP3.99□□□□□ -1.77
VPS13C-201ENST00000249837 TMEM230Q96A57 120 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 PIEZO2Q9H5I5 2752 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 AKIRIN1Q9H9L7 192 aaPredicted RBP3.99□□□□□ -1.77
VPS13C-201ENST00000249837 FUT9Q9Y231 359 aa3.99□□□□□ -1.77
VPS13C-201ENST00000249837 IGKV3D-11A0A0A0MRZ8 115 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 A0A1W2PPE3 182 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 DHRS13Q6UX07 377 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 RHOVQ96L33 236 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 TP53RKQ96S44 253 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 TMEM204Q9BSN7 226 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 DOK5Q9P104 306 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 CDIPTO14735 213 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 FGF16O43320 207 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 GNB1P62873 340 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 CFHR1Q03591 330 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 TUSC5Q8IXB3 177 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 OR10G8Q8NGN5 311 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 OR4A4PQ8NGN8 299 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 M1APQ8TC57 530 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 DYNLRB1Q9NP97 96 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 PARD6AQ9NPB6 346 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF331Q9NQX6 463 aaPredicted RBP3.98□□□□□ -1.77
VPS13C-201ENST00000249837 ADAMTS9Q9P2N4 1935 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 C3orf80F5H4A9 247 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 ZIC3O60481 467 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 HEXAP06865 529 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 NAT2P11245 290 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 SMRP1Q8NCR6 262 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 GSN-AS1Q9NRJ2 163 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 MYO9AB2RTY4 2548 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 HLA-GP17693 338 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 PMCHP20382 165 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 MDH2P40926 338 aaKnown RBP3.98□□□□□ -1.77
VPS13C-201ENST00000249837 CCL20P78556 96 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 MRGPRGQ86SM5 289 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 LYG1Q8N1E2 194 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 FOXO1Q12778 655 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 PCOLCEQ15113 449 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 OR10S1Q8NGN2 331 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 LRRC29Q8WV35 223 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 TRAV34A0A0B4J273 112 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 IGHMP01871 453 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 MELTFP08582 738 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 OR5D13Q8NGL4 314 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 SLC35E1Q96K37 410 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 IGHV3OR15-7A0A075B7D8 119 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 A0A1B0GU03 582 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 HSBP1L1C9JCN9 74 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 TCAPO15273 167 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 CLN5O75503 358 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 DEFB109BQ30KR1 87 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 OR52L2PQ8NGH6 319 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 MAFAQ8NHW3 353 aaPredicted RBP3.98□□□□□ -1.77
VPS13C-201ENST00000249837 KCNIP2Q9NS61 270 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 TGIF2-C20orf24A0A0A6YYL0 155 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 CTXND1A0A1B0GTU2 59 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 CXorf65A6NEN9 183 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 J3QT63 122 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 ACAA1P09110 424 aaPredicted RBP3.98□□□□□ -1.77
VPS13C-201ENST00000249837 RAB4AP20338 218 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 TRA2AQ13595 282 aaKnown RBP eCLIP3.98□□□□□ -1.77
VPS13C-201ENST00000249837 RNPS1Q15287 305 aaKnown RBP3.98□□□□□ -1.77
VPS13C-201ENST00000249837 TDHQ8IZJ6 230 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 IGKV1-9A0A0C4DH69 117 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 SCCPDHQ8NBX0 429 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 SSMEM1Q8WWF3 244 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 RAB9BQ9NP90 201 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 SLC35D1Q9NTN3 355 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 RYDENQ9NUL5 291 aaKnown RBP3.98□□□□□ -1.77
VPS13C-201ENST00000249837 TAAR3PQ9P1P4 343 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 DUXBA0A1W2PPF3 345 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 MMP7P09237 267 aaPredicted RBP3.98□□□□□ -1.77
VPS13C-201ENST00000249837 KHDC3LQ587J8 217 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF766Q5HY98 468 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 PCGF1Q9BSM1 259 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 RBKSQ9H477 322 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 KIAA1456Q9P272 454 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF835Q9Y2P0 537 aa3.98□□□□□ -1.77
VPS13C-201ENST00000249837 CARHSP1Q9Y2V2 147 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms