RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 OR4F4Q96R69 305 aa12.96□□□□□ -0.33
COLCA2-207ENST00000639470 TMED9Q9BVK6 235 aa12.96□□□□□ -0.33
COLCA2-207ENST00000639470 ETAA1Q9NY74 926 aa12.96□□□□□ -0.33
COLCA2-207ENST00000639470 LSM2Q9Y333 95 aaKnown RBP12.96□□□□□ -0.33
COLCA2-207ENST00000639470 PEX16Q9Y5Y5 336 aa12.96□□□□□ -0.33
COLCA2-207ENST00000639470 HBZP02008 142 aa12.95□□□□□ -0.34
COLCA2-207ENST00000639470 ARHGDIBP52566 201 aa12.95□□□□□ -0.34
COLCA2-207ENST00000639470 TAS2R43P59537 309 aa12.95□□□□□ -0.34
COLCA2-207ENST00000639470 MED21Q13503 144 aa12.95□□□□□ -0.34
COLCA2-207ENST00000639470 LCNL1Q6ZST4 164 aa12.95□□□□□ -0.34
COLCA2-207ENST00000639470 LRRTM1Q86UE6 522 aa12.95□□□□□ -0.34
COLCA2-207ENST00000639470 DTX3Q8N9I9 347 aa12.95□□□□□ -0.34
COLCA2-207ENST00000639470 ZNF439Q8NDP4 499 aa12.95□□□□□ -0.34
COLCA2-207ENST00000639470 ST6GALNAC6Q969X2 333 aa12.95□□□□□ -0.34
COLCA2-207ENST00000639470 Q96M66 194 aa12.95□□□□□ -0.34
COLCA2-207ENST00000639470 C8orf4Q9NR00 106 aa12.95□□□□□ -0.34
COLCA2-207ENST00000639470 AURKAIP1Q9NWT8 199 aaPredicted RBP12.95□□□□□ -0.34
COLCA2-207ENST00000639470 TRAPPC2LQ9UL33 140 aa12.95□□□□□ -0.34
COLCA2-207ENST00000639470 CDK1P06493 297 aa12.94□□□□□ -0.34
COLCA2-207ENST00000639470 PF4V1P10720 104 aa12.94□□□□□ -0.34
COLCA2-207ENST00000639470 RAB7AP51149 207 aa12.94□□□□□ -0.34
COLCA2-207ENST00000639470 ZNF816Q0VGE8 651 aaPredicted RBP12.94□□□□□ -0.34
COLCA2-207ENST00000639470 ACSM3Q53FZ2 586 aa12.94□□□□□ -0.34
COLCA2-207ENST00000639470 CT45A1Q5HYN5 189 aa12.94□□□□□ -0.34
COLCA2-207ENST00000639470 FOXB2Q5VYV0 432 aa12.94□□□□□ -0.34
COLCA2-207ENST00000639470 ETV3LQ6ZN32 361 aa12.94□□□□□ -0.34
COLCA2-207ENST00000639470 LINC00596Q86U02 117 aa12.94□□□□□ -0.34
COLCA2-207ENST00000639470 THNSL2Q86YJ6 484 aa12.94□□□□□ -0.34
COLCA2-207ENST00000639470 OR10A7Q8NGE5 316 aa12.94□□□□□ -0.34
COLCA2-207ENST00000639470 OR52L2PQ8NGH6 319 aa12.94□□□□□ -0.34
COLCA2-207ENST00000639470 CT45A3Q8NHU0 189 aa12.94□□□□□ -0.34
COLCA2-207ENST00000639470 EAF1Q96JC9 268 aaPredicted RBP12.94□□□□□ -0.34
COLCA2-207ENST00000639470 DUX3Q96PT4 197 aa12.94□□□□□ -0.34
COLCA2-207ENST00000639470 PSMB11A5LHX3 300 aa12.93□□□□□ -0.34
COLCA2-207ENST00000639470 MCRIP1C9JLW8 97 aa12.93□□□□□ -0.34
COLCA2-207ENST00000639470 ZNF780AO75290 641 aaPredicted RBP12.93□□□□□ -0.34
COLCA2-207ENST00000639470 MPIG6BO95866 241 aa12.93□□□□□ -0.34
COLCA2-207ENST00000639470 CD33P20138 364 aa12.93□□□□□ -0.34
COLCA2-207ENST00000639470 GZMHP20718 246 aa12.93□□□□□ -0.34
COLCA2-207ENST00000639470 NKAPLQ5M9Q1 402 aa12.93□□□□□ -0.34
COLCA2-207ENST00000639470 C6orf141Q5SZD1 244 aa12.93□□□□□ -0.34
COLCA2-207ENST00000639470 UNQ9370/PRO34162Q6UXP9 181 aa12.93□□□□□ -0.34
COLCA2-207ENST00000639470 OR8H3Q8N146 312 aa12.93□□□□□ -0.34
COLCA2-207ENST00000639470 Q8N6K4 173 aa12.93□□□□□ -0.34
COLCA2-207ENST00000639470 OR4X2Q8NGF9 303 aa12.93□□□□□ -0.34
COLCA2-207ENST00000639470 RTN4IP1Q8WWV3 396 aaPredicted RBP12.93□□□□□ -0.34
COLCA2-207ENST00000639470 TMEM203Q969S6 136 aa12.93□□□□□ -0.34
COLCA2-207ENST00000639470 SULT4A1Q9BR01 284 aa12.93□□□□□ -0.34
COLCA2-207ENST00000639470 NICN1Q9BSH3 213 aa12.93□□□□□ -0.34
COLCA2-207ENST00000639470 GNG12Q9UBI6 72 aa12.93□□□□□ -0.34
COLCA2-207ENST00000639470 TSSC4Q9Y5U2 329 aaPredicted RBP12.93□□□□□ -0.34
COLCA2-207ENST00000639470 ORC5O43913 435 aa12.92□□□□□ -0.34
COLCA2-207ENST00000639470 GAPDHP04406 335 aaKnown RBP12.92□□□□□ -0.34
COLCA2-207ENST00000639470 VSIG8P0DPA2 414 aa12.92□□□□□ -0.34
COLCA2-207ENST00000639470 PPP1CCP36873 323 aaKnown RBP12.92□□□□□ -0.34
COLCA2-207ENST00000639470 GAPTQ8N292 157 aa12.92□□□□□ -0.34
COLCA2-207ENST00000639470 LINC00311Q8N616 119 aa12.92□□□□□ -0.34
COLCA2-207ENST00000639470 Q8N9W7 124 aa12.92□□□□□ -0.34
COLCA2-207ENST00000639470 MRPL30Q8TCC3 161 aaKnown RBP12.92□□□□□ -0.34
COLCA2-207ENST00000639470 GFI1Q99684 422 aa12.92□□□□□ -0.34
COLCA2-207ENST00000639470 HSPB9Q9BQS6 159 aa12.92□□□□□ -0.34
COLCA2-207ENST00000639470 TAF9BQ9HBM6 251 aa12.92□□□□□ -0.34
COLCA2-207ENST00000639470 PCDHB16Q9NRJ7 776 aa12.92□□□□□ -0.34
COLCA2-207ENST00000639470 PLSCR3Q9NRY6 295 aa12.92□□□□□ -0.34
COLCA2-207ENST00000639470 ERGIC3Q9Y282 383 aa12.92□□□□□ -0.34
COLCA2-207ENST00000639470 A0A0A6YYD4 124 aa12.91□□□□□ -0.34
COLCA2-207ENST00000639470 NCBP2LA6PVI3 153 aaKnown RBP12.91□□□□□ -0.34
COLCA2-207ENST00000639470 SERPINE3A8MV23 424 aa12.91□□□□□ -0.34
COLCA2-207ENST00000639470 H3BUI4 141 aa12.91□□□□□ -0.34
COLCA2-207ENST00000639470 M0QZK8 103 aa12.91□□□□□ -0.34
COLCA2-207ENST00000639470 PF4P02776 101 aa12.91□□□□□ -0.34
COLCA2-207ENST00000639470 CD1AP06126 327 aa12.91□□□□□ -0.34
COLCA2-207ENST00000639470 HOXD3P31249 432 aaPredicted RBP12.91□□□□□ -0.34
COLCA2-207ENST00000639470 F2RL1P55085 397 aa12.91□□□□□ -0.34
COLCA2-207ENST00000639470 KRTAP10-11P60412 298 aa12.91□□□□□ -0.34
COLCA2-207ENST00000639470 RPS25P62851 125 aaKnown RBP12.91□□□□□ -0.34
COLCA2-207ENST00000639470 UNC119Q13432 240 aa12.91□□□□□ -0.34
COLCA2-207ENST00000639470 GPR50Q13585 617 aa12.91□□□□□ -0.34
COLCA2-207ENST00000639470 EBI3Q14213 229 aa12.91□□□□□ -0.34
COLCA2-207ENST00000639470 GPR176Q14439 515 aa12.91□□□□□ -0.34
COLCA2-207ENST00000639470 IRF3Q14653 427 aa12.91□□□□□ -0.34
COLCA2-207ENST00000639470 RBM48Q5RL73 367 aaKnown RBP12.91□□□□□ -0.34
COLCA2-207ENST00000639470 SLC16A12Q6ZSM3 486 aa12.91□□□□□ -0.34
COLCA2-207ENST00000639470 SLC25A48Q6ZT89 311 aaKnown RBP12.91□□□□□ -0.34
COLCA2-207ENST00000639470 C6orf201Q7Z4U5 140 aa12.91□□□□□ -0.34
COLCA2-207ENST00000639470 OR52M1Q8NGK5 317 aa12.91□□□□□ -0.34
COLCA2-207ENST00000639470 MRAPQ8TCY5 172 aa12.91□□□□□ -0.34
COLCA2-207ENST00000639470 RITA1Q96K30 269 aa12.91□□□□□ -0.34
COLCA2-207ENST00000639470 PARP12Q9H0J9 701 aaKnown RBP12.91□□□□□ -0.34
COLCA2-207ENST00000639470 PDCD6O75340 191 aa12.9□□□□□ -0.34
COLCA2-207ENST00000639470 SC5DO75845 299 aa12.9□□□□□ -0.34
COLCA2-207ENST00000639470 FUT3P21217 361 aa12.9□□□□□ -0.34
COLCA2-207ENST00000639470 CHATP28329 748 aa12.9□□□□□ -0.34
COLCA2-207ENST00000639470 HTR2CP28335 458 aa12.9□□□□□ -0.34
COLCA2-207ENST00000639470 MAP2K4P45985 399 aa12.9□□□□□ -0.34
COLCA2-207ENST00000639470 SPHARQ15513 63 aa12.9□□□□□ -0.34
COLCA2-207ENST00000639470 MED22Q15528 200 aa12.9□□□□□ -0.34
COLCA2-207ENST00000639470 LIPKQ5VXJ0 399 aa12.9□□□□□ -0.34
COLCA2-207ENST00000639470 C8orf86Q6ZUL3 223 aa12.9□□□□□ -0.34
COLCA2-207ENST00000639470 CEACAM19Q7Z692 300 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms