RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 SPINT2O43291 252 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 CYTIPO60759 359 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 MPZP25189 248 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 RAB31Q13636 194 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 IGFBP7Q16270 282 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 FFAR4Q5NUL3 377 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 DHRS13Q6UX07 377 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 C17orf82Q86X59 251 aaPredicted RBP5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 PPP1R35Q8TAP8 253 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 FGFBP3Q8TAT2 258 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 TRIB1Q96RU8 372 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 SAMD10Q9BYL1 202 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 ACTR3CQ9C0K3 210 aaPredicted RBP5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 WFDC1Q9HC57 220 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 TAAR3PQ9P1P4 343 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 KIAA1456Q9P272 454 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 CHD7Q9P2D1 2997 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 IGLV3-12A0A075B6K2 115 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 TRBV6-7A0A0A0MS04 114 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 TGIF2-C20orf24A0A0A6YYL0 155 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 IGKV1-12A0A0C4DH73 117 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 C17orf112F2Z3M2 114 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 IGKV1D-12P01611 117 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 ZNF17P17021 662 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 COX5AP20674 150 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 CCL20P78556 96 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 FAM209BQ5JX69 171 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 MYPOPQ86VE0 399 aaPredicted RBP5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 TMEM54Q969K7 222 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 BOD1Q96IK1 185 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 FER1L6-AS2Q96M78 137 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 PNRC2Q9NPJ4 139 aaKnown RBP5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 TINAGQ9UJW2 476 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 TRANK1O15050 2925 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 SHISA7A6NL88 538 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 LINC00587B1AMM8 73 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 SYNGR3O43761 229 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 PITX3O75364 302 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 TNFSF15O95150 251 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 SLC25A6P12236 298 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 H3F3AP84243 136 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 SSPNQ14714 243 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 SSX2Q16385 188 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 KCNMB1Q16558 191 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 SELENOHQ8IZQ5 122 aaKnown RBP5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 ZNF383Q8NA42 475 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 GPR146Q96CH1 333 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 OR51I2Q9H344 312 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 ZNF552Q9H707 407 aaPredicted RBP5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 TMEM100Q9NV29 134 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 SH3BGRL2Q9UJC5 107 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 PSG11Q9UQ72 335 aa5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 KLF13Q9Y2Y9 288 aaPredicted RBP5.91□□□□□ -1.46
SYNPO2-206ENST00000610556 OBSL1O75147 1896 aa5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 TTC28Q96AY4 2481 aa5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 IGKV1-27A0A075B6S5 117 aa5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 MDFIC2A0A1B0GVS7 189 aa5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 ZNF320A2RRD8 509 aa5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 PGLYRP1O75594 196 aaPredicted RBP5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 CELA3AP09093 270 aa5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 ACAA1P09110 424 aaPredicted RBP5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 OR8U8P0C7N1 319 aa5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 SELEP16581 610 aa5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 KITLGP21583 273 aa5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 G6PCP35575 357 aa5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 PTGDSP41222 190 aa5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 GPR12P47775 334 aa5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 MEOX1P50221 254 aa5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 FGF12P61328 243 aa5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 HTD2P86397 168 aa5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 HABP2Q14520 560 aaPredicted RBP5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 TMEM241Q24JQ0 296 aa5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 Q3ZCU0 254 aa5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 SLC23A3Q6PIS1 610 aa5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 GPR61Q9BZJ8 451 aa5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 DOK5Q9P104 306 aa5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 OR1A1Q9P1Q5 309 aa5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 SZT2Q5T011 3432 aa5.9□□□□□ -1.46
SYNPO2-206ENST00000610556 COLCA2A8K830 154 aa5.9□□□□□ -1.47
SYNPO2-206ENST00000610556 FGF5P12034 268 aa5.9□□□□□ -1.47
SYNPO2-206ENST00000610556 CCL1P22362 96 aa5.9□□□□□ -1.47
SYNPO2-206ENST00000610556 ANOS1P23352 680 aa5.9□□□□□ -1.47
SYNPO2-206ENST00000610556 PMELP40967 661 aa5.9□□□□□ -1.47
SYNPO2-206ENST00000610556 CEBPDP49716 269 aaPredicted RBP5.9□□□□□ -1.47
SYNPO2-206ENST00000610556 B2MP61769 119 aa5.9□□□□□ -1.47
SYNPO2-206ENST00000610556 FOXO1Q12778 655 aa5.9□□□□□ -1.47
SYNPO2-206ENST00000610556 TRA2AQ13595 282 aaKnown RBP eCLIP5.9□□□□□ -1.47
SYNPO2-206ENST00000610556 OR8B8Q15620 311 aa5.9□□□□□ -1.47
SYNPO2-206ENST00000610556 SLC25A53Q5H9E4 307 aa5.9□□□□□ -1.47
SYNPO2-206ENST00000610556 FADS6Q8N9I5 356 aa5.9□□□□□ -1.47
SYNPO2-206ENST00000610556 GALNT14Q96FL9 552 aa5.9□□□□□ -1.47
SYNPO2-206ENST00000610556 C1orf147Q96MC9 270 aaPredicted RBP5.9□□□□□ -1.47
SYNPO2-206ENST00000610556 HIPK2Q9H2X6 1198 aa5.9□□□□□ -1.47
SYNPO2-206ENST00000610556 CLN8Q9UBY8 286 aa5.9□□□□□ -1.47
SYNPO2-206ENST00000610556 DOCK10Q96BY6 2186 aa5.9□□□□□ -1.47
SYNPO2-206ENST00000610556 TRGV5A0A0B4J1U4 118 aa5.9□□□□□ -1.47
SYNPO2-206ENST00000610556 IGKV1D-13A0A0B4J2D9 117 aa5.9□□□□□ -1.47
SYNPO2-206ENST00000610556 hCG_38984A0A1B0GV85 526 aa5.9□□□□□ -1.47
SYNPO2-206ENST00000610556 RRP8O43159 456 aaKnown RBP5.9□□□□□ -1.47
SYNPO2-206ENST00000610556 UMODP07911 640 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms