RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 DANCRP0C864 163 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 FXYD4P59646 89 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 IL13RA1P78552 427 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 HFEQ30201 348 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 LPCAT3Q6P1A2 487 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 DTX2Q86UW9 622 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 C12orf45Q8N5I9 185 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 TMEM230Q96A57 120 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 KIRREL1Q96J84 757 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 GAFA1Q96PS6 74 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 CCL13Q99616 98 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 KLF2Q9Y5W3 355 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 DYSFO75923 2080 aa14.72□□□□□ -0.05
SHKBP1-224ENST00000600718 I3L521 148 aa14.72□□□□□ -0.05
SHKBP1-224ENST00000600718 PI3P19957 117 aa14.72□□□□□ -0.05
SHKBP1-224ENST00000600718 EDDM3AQ14507 147 aa14.72□□□□□ -0.05
SHKBP1-224ENST00000600718 TOMM40LQ969M1 308 aa14.72□□□□□ -0.05
SHKBP1-224ENST00000600718 CLEC4MQ9H2X3 399 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-224ENST00000600718 RPS10-NUDT3A0A1W2PQS6 291 aa14.71□□□□□ -0.05
SHKBP1-224ENST00000600718 NKX6-3A6NJ46 265 aa14.71□□□□□ -0.05
SHKBP1-224ENST00000600718 SIGLEC5O15389 551 aa14.71□□□□□ -0.05
SHKBP1-224ENST00000600718 CXCL3P19876 107 aa14.71□□□□□ -0.05
SHKBP1-224ENST00000600718 VAMP1P23763 118 aa14.71□□□□□ -0.05
SHKBP1-224ENST00000600718 CR1LQ2VPA4 569 aa14.71□□□□□ -0.05
SHKBP1-224ENST00000600718 H1FOOQ8IZA3 346 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-224ENST00000600718 IL1F10Q8WWZ1 152 aa14.71□□□□□ -0.05
SHKBP1-224ENST00000600718 GALMQ96C23 342 aa14.71□□□□□ -0.05
SHKBP1-224ENST00000600718 MGAT4CQ9UBM8 478 aa14.71□□□□□ -0.05
SHKBP1-224ENST00000600718 OPN4Q9UHM6 478 aa14.71□□□□□ -0.05
SHKBP1-224ENST00000600718 ICE1Q9Y2F5 2266 aa14.71□□□□□ -0.05
SHKBP1-224ENST00000600718 ADGRG4Q8IZF6 3080 aa14.71□□□□□ -0.05
SHKBP1-224ENST00000600718 ODAMA1E959 279 aa14.71□□□□□ -0.06
SHKBP1-224ENST00000600718 C12orf77C9JDV5 145 aa14.71□□□□□ -0.06
SHKBP1-224ENST00000600718 DUS4LO95620 317 aaKnown RBP14.71□□□□□ -0.06
SHKBP1-224ENST00000600718 SOD3P08294 240 aa14.71□□□□□ -0.06
SHKBP1-224ENST00000600718 GZMHP20718 246 aa14.71□□□□□ -0.06
SHKBP1-224ENST00000600718 COMMD7Q86VX2 200 aa14.71□□□□□ -0.06
SHKBP1-224ENST00000600718 PRR18Q8N4B5 295 aa14.71□□□□□ -0.06
SHKBP1-224ENST00000600718 UXS1Q8NBZ7 420 aa14.71□□□□□ -0.06
SHKBP1-224ENST00000600718 OR2AK2Q8NG84 335 aa14.71□□□□□ -0.06
SHKBP1-224ENST00000600718 MITD1Q8WV92 249 aa14.71□□□□□ -0.06
SHKBP1-224ENST00000600718 RSRP1Q9BUV0 290 aa14.71□□□□□ -0.06
SHKBP1-224ENST00000600718 A0A1W2PPR1 153 aa14.7□□□□□ -0.06
SHKBP1-224ENST00000600718 SFT2D2O95562 160 aa14.7□□□□□ -0.06
SHKBP1-224ENST00000600718 HEXAP06865 529 aa14.7□□□□□ -0.06
SHKBP1-224ENST00000600718 CTRB1P17538 263 aa14.7□□□□□ -0.06
SHKBP1-224ENST00000600718 AANATQ16613 207 aa14.7□□□□□ -0.06
SHKBP1-224ENST00000600718 ABCA11PQ4W5N1 156 aa14.7□□□□□ -0.06
SHKBP1-224ENST00000600718 CTRB2Q6GPI1 263 aa14.7□□□□□ -0.06
SHKBP1-224ENST00000600718 TPRX1Q8N7U7 411 aa14.7□□□□□ -0.06
SHKBP1-224ENST00000600718 ZNF565Q8N9K5 539 aa14.7□□□□□ -0.06
SHKBP1-224ENST00000600718 OR11H4Q8NGC9 324 aa14.7□□□□□ -0.06
SHKBP1-224ENST00000600718 OR13A1Q8NGR1 328 aa14.7□□□□□ -0.06
SHKBP1-224ENST00000600718 MRGPRDQ8TDS7 321 aa14.7□□□□□ -0.06
SHKBP1-224ENST00000600718 NEU4Q8WWR8 484 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-224ENST00000600718 PHB2Q99623 299 aa14.7□□□□□ -0.06
SHKBP1-224ENST00000600718 UBQLN2Q9UHD9 624 aa14.7□□□□□ -0.06
SHKBP1-224ENST00000600718 OR2W1Q9Y3N9 320 aa14.7□□□□□ -0.06
SHKBP1-224ENST00000600718 TNFRSF13BO14836 293 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-224ENST00000600718 NDUFA2O43678 99 aa14.69□□□□□ -0.06
SHKBP1-224ENST00000600718 FSTL3O95633 263 aa14.69□□□□□ -0.06
SHKBP1-224ENST00000600718 CD34P28906 385 aa14.69□□□□□ -0.06
SHKBP1-224ENST00000600718 IL2RGP31785 369 aa14.69□□□□□ -0.06
SHKBP1-224ENST00000600718 TMEM65Q6PI78 240 aa14.69□□□□□ -0.06
SHKBP1-224ENST00000600718 C11orf88Q6PI97 169 aa14.69□□□□□ -0.06
SHKBP1-224ENST00000600718 ZNF436Q9C0F3 470 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-224ENST00000600718 DLL4Q9NR61 685 aa14.69□□□□□ -0.06
SHKBP1-224ENST00000600718 OR6C3Q9NZP0 311 aa14.69□□□□□ -0.06
SHKBP1-224ENST00000600718 RELNP78509 3460 aa14.69□□□□□ -0.06
SHKBP1-224ENST00000600718 ANKHD1Q8IWZ3 2542 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-224ENST00000600718 CACNA1DQ01668 2161 aa14.69□□□□□ -0.06
SHKBP1-224ENST00000600718 HSPA12AO43301 675 aa14.69□□□□□ -0.06
SHKBP1-224ENST00000600718 HBZP02008 142 aa14.69□□□□□ -0.06
SHKBP1-224ENST00000600718 COL8A2P25067 703 aa14.69□□□□□ -0.06
SHKBP1-224ENST00000600718 EDDM3BP56851 147 aa14.69□□□□□ -0.06
SHKBP1-224ENST00000600718 SGPP2Q8IWX5 399 aa14.69□□□□□ -0.06
SHKBP1-224ENST00000600718 FAM216BQ8N7L0 139 aa14.69□□□□□ -0.06
SHKBP1-224ENST00000600718 OR1L1Q8NH94 360 aa14.69□□□□□ -0.06
SHKBP1-224ENST00000600718 CASTOR1Q8WTX7 329 aa14.69□□□□□ -0.06
SHKBP1-224ENST00000600718 SPOCK3Q9BQ16 436 aa14.69□□□□□ -0.06
SHKBP1-224ENST00000600718 OR1A1Q9P1Q5 309 aa14.69□□□□□ -0.06
SHKBP1-224ENST00000600718 A0A0B4J2A0 478 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 A0A1B0GW55 424 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 CRYM-AS1A6NIL9 109 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 TMPRSS2O15393 492 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 SPINT2O43291 252 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 SCO1O75880 301 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 DUX4L2P0CJ85 424 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 DUX4L3P0CJ86 424 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 DUX4L4P0CJ87 422 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 DUX4L5P0CJ88 424 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 DUX4L6P0CJ89 424 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 DUX4L7P0CJ90 424 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 RRASP10301 218 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 SELLP14151 372 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 RPS2P15880 293 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 PIGPP57054 158 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 SUPT4H1P63272 117 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 MRPS11P82912 194 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 EXOSC2Q13868 293 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 194.8 ms