RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 ARSBP15848 533 aa13.08□□□□□ -0.32
SHKBP1-215ENST00000597649 DUSP1P28562 367 aa13.08□□□□□ -0.32
SHKBP1-215ENST00000597649 TMBIM6P55061 237 aa13.08□□□□□ -0.32
SHKBP1-215ENST00000597649 SCN1BQ07699 218 aa13.08□□□□□ -0.32
SHKBP1-215ENST00000597649 TPRX1Q8N7U7 411 aa13.08□□□□□ -0.32
SHKBP1-215ENST00000597649 OR4P4Q8NGL7 312 aa13.08□□□□□ -0.32
SHKBP1-215ENST00000597649 ZNF714Q96N38 554 aa13.08□□□□□ -0.32
SHKBP1-215ENST00000597649 SESN1Q9Y6P5 492 aa13.08□□□□□ -0.32
SHKBP1-215ENST00000597649 AIPO00170 330 aa13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 HAND1O96004 215 aa13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 CHRM2P08172 466 aa13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 RPS19P39019 145 aaKnown RBP13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 CLDN12P56749 244 aa13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 MEF2CQ06413 473 aaPredicted RBP13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 CTF1Q16619 201 aa13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 SFXN4Q6P4A7 337 aa13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 GDPD3Q7L5L3 318 aa13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 C16orf82Q7Z2V1 217 aa13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 CROCCP3Q8IVE0 287 aa13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 OR8H2Q8N162 312 aa13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 OR51D1Q8NGF3 324 aa13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 KCNG3Q8TAE7 436 aa13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 FAM46BQ96A09 425 aa13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 FAM3DQ96BQ1 224 aa13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 MRPS24Q96EL2 167 aaKnown RBP13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 BCL7BQ9BQE9 202 aa13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 TMEM133Q9H2Q1 129 aa13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 BANF2Q9H503 90 aa13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 LIN7BQ9HAP6 207 aa13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 DAPK2Q9UIK4 370 aa13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 ST3GAL6Q9Y274 331 aa13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 DNAH1Q9P2D7 4330 aa13.07□□□□□ -0.32
SHKBP1-215ENST00000597649 DEGS1O15121 323 aa13.06□□□□□ -0.32
SHKBP1-215ENST00000597649 SLC2A2P11168 524 aaPredicted RBP13.06□□□□□ -0.32
SHKBP1-215ENST00000597649 ZNF44P15621 663 aa13.06□□□□□ -0.32
SHKBP1-215ENST00000597649 MGMTP16455 207 aa13.06□□□□□ -0.32
SHKBP1-215ENST00000597649 HTR1DP28221 377 aa13.06□□□□□ -0.32
SHKBP1-215ENST00000597649 EDDM3AQ14507 147 aa13.06□□□□□ -0.32
SHKBP1-215ENST00000597649 ZNF146Q15072 292 aa13.06□□□□□ -0.32
SHKBP1-215ENST00000597649 C2orf76Q3KRA6 126 aa13.06□□□□□ -0.32
SHKBP1-215ENST00000597649 KHDC1LQ5JSQ8 128 aa13.06□□□□□ -0.32
SHKBP1-215ENST00000597649 IDNKQ5T6J7 187 aa13.06□□□□□ -0.32
SHKBP1-215ENST00000597649 C18orf65Q6ZTR6 163 aa13.06□□□□□ -0.32
SHKBP1-215ENST00000597649 NR2C2APQ86WQ0 139 aa13.06□□□□□ -0.32
SHKBP1-215ENST00000597649 Q8NFD4 153 aa13.06□□□□□ -0.32
SHKBP1-215ENST00000597649 OR4X2Q8NGF9 303 aa13.06□□□□□ -0.32
SHKBP1-215ENST00000597649 SNX22Q96L94 193 aa13.06□□□□□ -0.32
SHKBP1-215ENST00000597649 CLEC7AQ9BXN2 247 aa13.06□□□□□ -0.32
SHKBP1-215ENST00000597649 SELENOIQ9C0D9 397 aa13.06□□□□□ -0.32
SHKBP1-215ENST00000597649 IL36RNQ9UBH0 155 aa13.06□□□□□ -0.32
SHKBP1-215ENST00000597649 A0A1W2PP11 408 aa13.05□□□□□ -0.32
SHKBP1-215ENST00000597649 hADV38S2A0JD32 116 aa13.05□□□□□ -0.32
SHKBP1-215ENST00000597649 GABRR1P24046 479 aa13.05□□□□□ -0.32
SHKBP1-215ENST00000597649 THBS3P49746 956 aa13.05□□□□□ -0.32
SHKBP1-215ENST00000597649 RBM11P57052 281 aaKnown RBP13.05□□□□□ -0.32
SHKBP1-215ENST00000597649 IL13RA2Q14627 380 aa13.05□□□□□ -0.32
SHKBP1-215ENST00000597649 PIGYQ3MUY2 71 aa13.05□□□□□ -0.32
SHKBP1-215ENST00000597649 OR10K2Q6IF99 312 aa13.05□□□□□ -0.32
SHKBP1-215ENST00000597649 OR2W3Q7Z3T1 314 aa13.05□□□□□ -0.32
SHKBP1-215ENST00000597649 LINC00596Q86U02 117 aa13.05□□□□□ -0.32
SHKBP1-215ENST00000597649 TMEM104Q8NE00 496 aa13.05□□□□□ -0.32
SHKBP1-215ENST00000597649 OR51T1Q8NGJ9 327 aa13.05□□□□□ -0.32
SHKBP1-215ENST00000597649 RBM14Q96PK6 669 aaKnown RBP13.05□□□□□ -0.32
SHKBP1-215ENST00000597649 SLC25A33Q9BSK2 321 aa13.05□□□□□ -0.32
SHKBP1-215ENST00000597649 URM1Q9BTM9 101 aaKnown RBP13.05□□□□□ -0.32
SHKBP1-215ENST00000597649 TMEM59Q9BXS4 323 aa13.05□□□□□ -0.32
SHKBP1-215ENST00000597649 CHST6Q9GZX3 395 aa13.05□□□□□ -0.32
SHKBP1-215ENST00000597649 DCSTAMPQ9H295 470 aa13.05□□□□□ -0.32
SHKBP1-215ENST00000597649 DPM3Q9P2X0 92 aa13.05□□□□□ -0.32
SHKBP1-215ENST00000597649 LINC00312Q9Y6C7 94 aa13.05□□□□□ -0.32
SHKBP1-215ENST00000597649 CEPT1Q9Y6K0 416 aa13.05□□□□□ -0.32
SHKBP1-215ENST00000597649 H3BUI4 141 aa13.04□□□□□ -0.32
SHKBP1-215ENST00000597649 SIRPB1O00241 398 aa13.04□□□□□ -0.32
SHKBP1-215ENST00000597649 PSPNO60542 156 aa13.04□□□□□ -0.32
SHKBP1-215ENST00000597649 TMEM127O75204 238 aa13.04□□□□□ -0.32
SHKBP1-215ENST00000597649 OR7C1O76099 320 aaPredicted RBP13.04□□□□□ -0.32
SHKBP1-215ENST00000597649 OR2F2O95006 317 aa13.04□□□□□ -0.32
SHKBP1-215ENST00000597649 OR2H2O95918 312 aa13.04□□□□□ -0.32
SHKBP1-215ENST00000597649 RORCP51449 518 aa13.04□□□□□ -0.32
SHKBP1-215ENST00000597649 NHLRC3Q5JS37 347 aa13.04□□□□□ -0.32
SHKBP1-215ENST00000597649 ZNF329Q86UD4 541 aa13.04□□□□□ -0.32
SHKBP1-215ENST00000597649 CHST4Q8NCG5 386 aa13.04□□□□□ -0.32
SHKBP1-215ENST00000597649 ISOC1Q96CN7 298 aa13.04□□□□□ -0.32
SHKBP1-215ENST00000597649 KCNK15Q9H427 330 aa13.04□□□□□ -0.32
SHKBP1-215ENST00000597649 SEBOXQ9HB31 216 aaPredicted RBP13.04□□□□□ -0.32
SHKBP1-215ENST00000597649 RAB22AQ9UL26 194 aa13.04□□□□□ -0.32
SHKBP1-215ENST00000597649 KIAA2026Q5HYC2 2103 aa13.03□□□□□ -0.32
SHKBP1-215ENST00000597649 A0A0B4J203 849 aa13.03□□□□□ -0.32
SHKBP1-215ENST00000597649 TMEM14DPA8MWL7 114 aa13.03□□□□□ -0.32
SHKBP1-215ENST00000597649 GEMIN2O14893 280 aaKnown RBP13.03□□□□□ -0.32
SHKBP1-215ENST00000597649 GRK1Q15835 563 aa13.03□□□□□ -0.32
SHKBP1-215ENST00000597649 MPV17LQ2QL34 196 aa13.03□□□□□ -0.32
SHKBP1-215ENST00000597649 NKAPLQ5M9Q1 402 aa13.03□□□□□ -0.32
SHKBP1-215ENST00000597649 ATAD3CQ5T2N8 411 aa13.03□□□□□ -0.32
SHKBP1-215ENST00000597649 ABHD12Q8N2K0 398 aa13.03□□□□□ -0.32
SHKBP1-215ENST00000597649 SLC25A46Q96AG3 418 aa13.03□□□□□ -0.32
SHKBP1-215ENST00000597649 AKR1E2Q96JD6 320 aa13.03□□□□□ -0.32
SHKBP1-215ENST00000597649 GPR61Q9BZJ8 451 aa13.03□□□□□ -0.32
SHKBP1-215ENST00000597649 NDUFA13Q9P0J0 144 aa13.03□□□□□ -0.32
SHKBP1-215ENST00000597649 RSL24D1Q9UHA3 163 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms